You are here

Home

ATCC10864_001822-T1, ATCC10864_001822-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001822-T1
Unique NameATCC10864_001822-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000032:83408..86104-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001822-T1 ID=ATCC10864_001822-T1|Name=ATCC10864_001822-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2697bp|location=Sequence derived from alignment at MCQH01000032:83408..86104- (Aspergillus niger ATCC 10864)
ATGACGGACCCTGTTGTCTTGCAGTCGGCGGTGCGAGTGCCTACTCCGCC
CCCAGGCACTTCCTACTCTCCTCAGGCCTCGGGTTCCCGCAAACGCTCAC
CTCCCTCTCGGTCTCCTTCGCCGAATCGTCGTCGCTCGCCCCCGGGTGAT
TCACTAAAAGACGGTGCGGATGCACCGCGCATCGATCCTGAACGCGCGAT
TGAAAGAGAGCGACAGCTCGCCGAGCGCCTTCGCCAACATGAGAAGCAGG
AGGCTGCTCGAAAGCCAATGACGGAGGAGGAAAAGCAGGCTGCGGCTAAA
GCAGAATATGAGAAGCTTTTGAACATGCGATCGGGTGGTACCTATATTCC
TCCTGCGCGACTACGGGCGCTGCAGGCGCAGATTACGGACAAGACCAGCA
AGGAGTACCAGCGGATGGCATGGGAGGCTCTTAAGAAGTCGATCAACGGT
CTCATCAACAAGGTCAACGTTTCCAACATCAAGTTTATCGTCCCGGAGCT
TTTTGGGGAGAACTTGGTGCGCGGTCGCGGTCTGTTTTGCAGAAGTATCA
TGAAAGCTCAGGCGGCCAGTTTGCCCTTCACACCTATCTACGCCGCCATG
GCGGCTATTGTGAACACCAAACTGCCCCAAGTCGGCGAGCTGTTGCTCAA
CCGTCTCATTGTCCAGTTCCGAAAGGCGTTCAAGAGAAACGACAAGGCAG
TCTGCATATCTTCCACGACCTTCATTGCCCATCTGTGCAACCAGCAGGTC
GCGCACGAGATGCTGGCCGCGCAGATTCTTCTTTTGCTGCTTCACAAGCC
CACGGATGACAGTGTCGAGATTGCTGTCGGCCTGACTCGAGAGGTTGGTC
AGCATCTGGAGGAGATGAGCGGTCCTATTGCCCTGGCGGTGTTTGATCAA
TTCCGAAATATCCTTCACGAAGCCGACATCGACAAGCGAGTACAGTATAT
GATTGAGGTGTTGTTCCAGGTCCGGAAAGATAGGTATAAGGACAACCCGG
CGATCAAGGAAGAATTGGACCTGATCGAGGAGGAAGACCAAATAACGCAT
CAGATCGGACTCGATGACGAGATTGAGACACAAGATTCCCTCAATATCTT
CAAGTACGATGCCGAATGGGAGGAGCACGAAGAGGCCTACAAGAAATTGA
AGGCAGAGATTCTGGGTGAAGGAAGTGATGACGAGGAGGACGACGAAGAC
GAGTCAGACGAGAGCTCCGATGAAGAGTCGGAGGAAGAGCGGAAGATGGA
CATTAAAGACCAGACCAACACAGACCTCGTGAACCTGCGGAGGACGATAT
ACCTGACGATCATGTCGAGTATCGATTTCGAAGAATGCTGTCACAAGCTG
ATGAAGATCTCGCTGCCCGCTGGCCTCGAGCCCGAGCTCCCGTCAATGAT
CATCGAGTGTTGCTCCCAGGAGCGCACGTATTCGAAGTTCTACGGCTTGA
TCGGAGAGCGCTTCGCAAAGATCAACCGGCTCTGGTCCGATCTCTTCGAA
GCTGCATTTGCCAAGTACTACGACACCATCCATCGCTACGAGACAAACCG
ACTCCGCAATATTGCCCGCTTCTTCGGCCATATGATTAGCAATGACGCGA
TTGGCTGGCATGTCATGTCGATCATCCACATGAACGAGGAGGAGACGACA
TCAAGCAGCCGTATCTTCATCAAGATCCTCTTCCAAGACCTCGGAGAACA
CCTGGGCCTGCCCAAACTGCAGGAACGCATGCGGGACGAGATCCTGCGTC
CCAGCTTCGAGGGCCTCTTCCCACTGGACAATCCCCGCAACACGCGCTTC
TCAATCAACTACTTCACCAGTATCGGCATGGGTATGCTGACGGAGGACAT
GCGCGAGCACCTAAAAAACCTCCCCAAGCCCACGATGCCTGCATTGCCCC
AACGCGATGCCGGCGCCGACTCCGACTCCGAGTCCGTGGTATCTCACCCA
ACCAGCTGCTCAACCTGTACTCCTCGCTCTCGCTCCCGCTCCCGCTCCTA
CTCCTACTCCCGCTCTCCTTCCCCCGGCCGTGGCCGCAGACGCTCCGTCA
GCCGCGGCCGATCCTACAGCCGCTCCGTGTCCGGATCCTCACGCCGCAGC
TACAGCTACACCCCTTCGCGGTCCAGGTCCCGATCCCCGGCGCCCAAATC
CCGCCGACGCCCCGTCTCATACAGTCGATCCCCCCGCAGAAGATCCTCCG
TGTCCCCAACACCCCCTCCTCGCCGGACACGCGATCGCTCCTACGATTCC
CGCTCTCCCAGACGCTCGCTCTCCCGGTCCGTCACCCCTCCGCCTCGCAG
CAAGCGAGATACCCACGCCCGCCGAGACAGAAGCTACTCCAGATCCGTCT
CCCGATCTGTCTCCCCTCCTCCACGTCAGGCTGCCGGAGGTGCCGCTCGG
TACTCGGAGTCTCCTCCTCCCCGCCGGCGGGTCGAAAGGAGCGTCTCCGC
GTCTCGCTCTCCTTCCCGTTCTCGTTCTCGTACTCCGGAGCGTCGTGCCC
CGCCTGGTCGTCGTGCCCCCCGTGATGCTTCAGTCTCGCGCTCGCGCTCC
CCTACCCCGCCGCGCGGTGGTGGTCGTCGTGGCGATGCTCCCCCTCGTCG
TCGTCGCTACTCTGACTCGTTGTCTCCGTCGCGGTCTCCGCCGCCGAGAC
GGCACAGGTCTCCGTCTAGAACGCCTCCCCGTCGGGTGCGCGATTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000032:83408..86104-

>ATCC10864_001822-T1 ID=ATCC10864_001822-T1|Name=ATCC10864_001822-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2697bp|location=Sequence derived from alignment at MCQH01000032:83408..86104- (Aspergillus niger ATCC 10864)
ATGACGGACCCTGTTGTCTTGCAGTCGGCGGTGCGAGTGCCTACTCCGCC
CCCAGGCACTTCCTACTCTCCTCAGGCCTCGGGTTCCCGCAAACGCTCAC
CTCCCTCTCGGTCTCCTTCGCCGAATCGTCGTCGCTCGCCCCCGGGTGAT
TCACTAAAAGACGGTGCGGATGCACCGCGCATCGATCCTGAACGCGCGAT
TGAAAGAGAGCGACAGCTCGCCGAGCGCCTTCGCCAACATGAGAAGCAGG
AGGCTGCTCGAAAGCCAATGACGGAGGAGGAAAAGCAGGCTGCGGCTAAA
GCAGAATATGAGAAGCTTTTGAACATGCGATCGGGTGGTACCTATATTCC
TCCTGCGCGACTACGGGCGCTGCAGGCGCAGATTACGGACAAGACCAGCA
AGGAGTACCAGCGGATGGCATGGGAGGCTCTTAAGAAGTCGATCAACGGT
CTCATCAACAAGGTCAACGTTTCCAACATCAAGTTTATCGTCCCGGAGCT
TTTTGGGGAGAACTTGGTGCGCGGTCGCGGTCTGTTTTGCAGAAGTATCA
TGAAAGCTCAGGCGGCCAGTTTGCCCTTCACACCTATCTACGCCGCCATG
GCGGCTATTGTGAACACCAAACTGCCCCAAGTCGGCGAGCTGTTGCTCAA
CCGTCTCATTGTCCAGTTCCGAAAGGCGTTCAAGAGAAACGACAAGGCAG
TCTGCATATCTTCCACGACCTTCATTGCCCATCTGTGCAACCAGCAGGTC
GCGCACGAGATGCTGGCCGCGCAGATTCTTCTTTTGCTGCTTCACAAGCC
CACGGATGACAGTGTCGAGATTGCTGTCGGCCTGACTCGAGAGGTTGGTC
AGCATCTGGAGGAGATGAGCGGTCCTATTGCCCTGGCGGTGTTTGATCAA
TTCCGAAATATCCTTCACGAAGCCGACATCGACAAGCGAGTACAGTATAT
GATTGAGGTGTTGTTCCAGGTCCGGAAAGATAGGTATAAGGACAACCCGG
CGATCAAGGAAGAATTGGACCTGATCGAGGAGGAAGACCAAATAACGCAT
CAGATCGGACTCGATGACGAGATTGAGACACAAGATTCCCTCAATATCTT
CAAGTACGATGCCGAATGGGAGGAGCACGAAGAGGCCTACAAGAAATTGA
AGGCAGAGATTCTGGGTGAAGGAAGTGATGACGAGGAGGACGACGAAGAC
GAGTCAGACGAGAGCTCCGATGAAGAGTCGGAGGAAGAGCGGAAGATGGA
CATTAAAGACCAGACCAACACAGACCTCGTGAACCTGCGGAGGACGATAT
ACCTGACGATCATGTCGAGTATCGATTTCGAAGAATGCTGTCACAAGCTG
ATGAAGATCTCGCTGCCCGCTGGCCTCGAGCCCGAGCTCCCGTCAATGAT
CATCGAGTGTTGCTCCCAGGAGCGCACGTATTCGAAGTTCTACGGCTTGA
TCGGAGAGCGCTTCGCAAAGATCAACCGGCTCTGGTCCGATCTCTTCGAA
GCTGCATTTGCCAAGTACTACGACACCATCCATCGCTACGAGACAAACCG
ACTCCGCAATATTGCCCGCTTCTTCGGCCATATGATTAGCAATGACGCGA
TTGGCTGGCATGTCATGTCGATCATCCACATGAACGAGGAGGAGACGACA
TCAAGCAGCCGTATCTTCATCAAGATCCTCTTCCAAGACCTCGGAGAACA
CCTGGGCCTGCCCAAACTGCAGGAACGCATGCGGGACGAGATCCTGCGTC
CCAGCTTCGAGGGCCTCTTCCCACTGGACAATCCCCGCAACACGCGCTTC
TCAATCAACTACTTCACCAGTATCGGCATGGGTATGCTGACGGAGGACAT
GCGCGAGCACCTAAAAAACCTCCCCAAGCCCACGATGCCTGCATTGCCCC
AACGCGATGCCGGCGCCGACTCCGACTCCGAGTCCGTGGTATCTCACCCA
ACCAGCTGCTCAACCTGTACTCCTCGCTCTCGCTCCCGCTCCCGCTCCTA
CTCCTACTCCCGCTCTCCTTCCCCCGGCCGTGGCCGCAGACGCTCCGTCA
GCCGCGGCCGATCCTACAGCCGCTCCGTGTCCGGATCCTCACGCCGCAGC
TACAGCTACACCCCTTCGCGGTCCAGGTCCCGATCCCCGGCGCCCAAATC
CCGCCGACGCCCCGTCTCATACAGTCGATCCCCCCGCAGAAGATCCTCCG
TGTCCCCAACACCCCCTCCTCGCCGGACACGCGATCGCTCCTACGATTCC
CGCTCTCCCAGACGCTCGCTCTCCCGGTCCGTCACCCCTCCGCCTCGCAG
CAAGCGAGATACCCACGCCCGCCGAGACAGAAGCTACTCCAGATCCGTCT
CCCGATCTGTCTCCCCTCCTCCACGTCAGGCTGCCGGAGGTGCCGCTCGG
TACTCGGAGTCTCCTCCTCCCCGCCGGCGGGTCGAAAGGAGCGTCTCCGC
GTCTCGCTCTCCTTCCCGTTCTCGTTCTCGTACTCCGGAGCGTCGTGCCC
CGCCTGGTCGTCGTGCCCCCCGTGATGCTTCAGTCTCGCGCTCGCGCTCC
CCTACCCCGCCGCGCGGTGGTGGTCGTCGTGGCGATGCTCCCCCTCGTCG
TCGTCGCTACTCTGACTCGTTGTCTCCGTCGCGGTCTCCGCCGCCGAGAC
GGCACAGGTCTCCGTCTAGAACGCCTCCCCGTCGGGTGCGCGATTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CWC22ATCC10864_001822Aspergillus niger ATCC 10864gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001822-T1.cdsATCC10864_001822-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001822-T1.exon1ATCC10864_001822-T1.exon1Aspergillus niger ATCC 10864exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001822-T1ATCC10864_001822-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR003891
PFAMPF02847
InterProIPR016024
InterProIPR003890
InterProIPR016021
Properties
Property NameValue
NoteBUSCO:EOG09263WM5
Productpre-mRNA-splicing factor cwc22
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000032supercontigMCQH01000032:83408..86104 -
Powered by Drupal