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ATCC10864_001837-T1, ATCC10864_001837-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001837-T1
Unique NameATCC10864_001837-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000032:123758..125145+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001837-T1 ID=ATCC10864_001837-T1|Name=ATCC10864_001837-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1388bp|location=Sequence derived from alignment at MCQH01000032:123758..125145+ (Aspergillus niger ATCC 10864)
ATGTTCTCCGGCTCCTCCCTCTTTCCGCACTGGCGGCGCAAAGCAGCCGA
ACGCTCCAGTAATAGTTCCTACGAGGTGCCCTTCTTCCTGAACGCTGCCT
ATTATCCCAATTGGAGGATATACCGGAAACAGCCTCCGTCGGCCCTTCGA
TTGGGCTTCATTTCTCATATCTTCTACGCGTTTGCATGGTACTAGTAACC
TCAAGTCGGCACCATGCTGATGGTCCCAGTCCATACCCAGAGACAGTTGT
TAACCAGCCTGCTTTTCTCGTTCATAGGGTCAAAGAAGATGGTACCGTTT
ATGTAACCAGTCCTCTCTCCCCATTGTGAGGGGCTGCTCTGGCTGACAAG
ACATGACTTCAAAACCAGCTTAGTGACGAATGGGCCGATGCGCAAATGCC
CGTCGACGGCACCAACGGCTGCCTGCGGGCCTTCGCGCAACTGAAGCCGC
AGTATTCCAAGATGAAACTCATTCTCTCAGTCGGAGGAGGCGGCAAGGGC
AGTGAGAACTTCGCCCAAGTGGCCCGCAGTCAATCCCGCACCGAGACGTT
TGTTCGGAGCGCGAGAGCACTGGTGGATCAATTTGGTCTGGACGGCATCG
ACGGTACGTGTAATGGAGCCGAGCCCCTCTCCCCTTATCATCATGGATGC
GTCATGTCGGTATAGTGAACAGAAAATAAGGTAAAATTGTGTGCATGCCC
TAAGGCTAACCAACCTTGTGCTGGCCCAACAGTGGATTGGGAATACCCCT
CCGACCCACAAGAAGGATCGGACTATATCCGTCTGCTGGCGCGACTGCGC
GAAGTCCTGCCGGCCCCGCGTTATGTTCTGGCCTCTTGTCTCCCGGCCGG
ACCATGGGCTCTCCGTAACATCGATCTTTCCAAGGCGCAACTCTATCTTG
ACCTGATCAATATCATGGCGTATGATTTCTCGGGCCCTTGGGAGAACCAG
TCGGGTCATCAGGCCCAGCTCTTCAGCAAGCATCCCGCAGCCATTTCATG
CCAAAACTCTATCTCGTACGTGCTCAACCAGGGCGTCGACCCCAAGAAGC
TCCTTCTGGGCATCCCCGCATACGGCCGCTCGTTCCTGGGTAGCACTGGA
GTTGGTCAGCGGTATGTAGGCTGTGGCGGTGAAGACGGCGTCTTCGACTA
TAGCCAGCTGCCGCGACCGGGAGCCAAGGAGCATCACGACAGCAGTCTGG
GGGCAGCATACTGCGTAGGGGGAGATGGCGGCTTCGTCACATATGACACA
CCCCAGACAGTGCAGCAGAAGGCGAAATTCGTCACAAAGATGAAGCTGGG
CGGGTTATTCTACTGGCATATTGGAGGCGACGCACGGGGACCGCGAAGTC
TGATTGAAACAGGGTATAACACATTGCATGATATGTAA
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Coding sequence (CDS) from alignment at MCQH01000032:123758..125145+

>ATCC10864_001837-T1 ID=ATCC10864_001837-T1|Name=ATCC10864_001837-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4416bp|location=Sequence derived from alignment at MCQH01000032:123758..125145+ (Aspergillus niger ATCC 10864)
ATGTTCTCCGGCTCCTCCCTCTTTCCGCACTGGCGGCGCAAAGCAGCCGA
ACGCTCCAGTAATAGTTCCTACGAGGTGCCCTTCTTCCTGAACGCTGCCT
ATTATCCCAATTGGAGGATATACCGGAAACAGCCTCCGTCGGCCCTTCGA
TTGGGCTTCATTTCTCATATCTTCTACGCGTTTGCATGGGTCAAAGAAGA
TGGTACCGTTTATCTTAGTGACGAATGGGCCGATGCGCAAATGCCCGTCG
ACGGCACCAACGGCTGCCTGCGGGCCTTCGCGCAACTGAAGCCGCAGTAT
TCCAAGATGAAACTCATTCTCTCAGTCGGAGGAGGCGGCAAGGGCAGTGA
GAACTTCGCCCAAGTGGCCCGCAGTCAATCCCGCACCGAGACGTTTGTTC
GGAGCGCGAGAGCACTGGTGGATCAATTTGGTCTGGACGGCATCGACGTG
GATTGGGAATACCCCTCCGACCCACAAGAAGGATCGGACTATATCCGTCT
GCTGGCGCGACTGCGCGAAGTCCTGCCGGCCCCGCGTTATGTTCTGGCCT
CTTGTCTCCCGGCCGGACCATGGGCTCTCCGTAACATCGATCTTTCCAAG
GCGCAACTCTATCTTGACCTGATCAATATCATGGCGTATGATTTCTCGGG
CCCTTGGGAGAACCAGTCGGGTCATCAGGCCCAGCTCTTCAGCAAGCATC
CCGCAGCCATTTCATGCCAAAACTCTATCTCGTACGTGCTCAACCAGGGC
GTCGACCCCAAGAAGCTCCTTCTGGGCATCCCCGCATACGGCCGCTCGTT
CCTGGGTAGCACTGGAGTTGGTCAGCGGTATGTAGGCTGTGGCGGTGAAG
ACGGCGTCTTCGACTATAGCCAGCTGCCGCGACCGGGAGCCAAGGAGCAT
CACGACAGCAGTCTGGGGGCAGCATACTGCGTAGGGGGAGATGGCGGCTT
CGTCACATATGACACACCCCAGACAGTGCAGCAGAAGGCGAAATTCGTCA
CAAAGATGAAGCTGGGCGGGTTATTCTACTGGCATATTGGAGGCGACGCA
CGGGGACCGCGAAGTCTGATTGAAACAGGGTATAACACATTGCATGATAT
GTAAATGTTCTCCGGCTCCTCCCTCTTTCCGCACTGGCGGCGCAAAGCAG
CCGAACGCTCCAGTAATAGTTCCTACGAGGTGCCCTTCTTCCTGAACGCT
GCCTATTATCCCAATTGGAGGATATACCGGAAACAGCCTCCGTCGGCCCT
TCGATTGGGCTTCATTTCTCATATCTTCTACGCGTTTGCATGGGTCAAAG
AAGATGGTACCGTTTATCTTAGTGACGAATGGGCCGATGCGCAAATGCCC
GTCGACGGCACCAACGGCTGCCTGCGGGCCTTCGCGCAACTGAAGCCGCA
GTATTCCAAGATGAAACTCATTCTCTCAGTCGGAGGAGGCGGCAAGGGCA
GTGAGAACTTCGCCCAAGTGGCCCGCAGTCAATCCCGCACCGAGACGTTT
GTTCGGAGCGCGAGAGCACTGGTGGATCAATTTGGTCTGGACGGCATCGA
CGTGGATTGGGAATACCCCTCCGACCCACAAGAAGGATCGGACTATATCC
GTCTGCTGGCGCGACTGCGCGAAGTCCTGCCGGCCCCGCGTTATGTTCTG
GCCTCTTGTCTCCCGGCCGGACCATGGGCTCTCCGTAACATCGATCTTTC
CAAGGCGCAACTCTATCTTGACCTGATCAATATCATGGCGTATGATTTCT
CGGGCCCTTGGGAGAACCAGTCGGGTCATCAGGCCCAGCTCTTCAGCAAG
CATCCCGCAGCCATTTCATGCCAAAACTCTATCTCGTACGTGCTCAACCA
GGGCGTCGACCCCAAGAAGCTCCTTCTGGGCATCCCCGCATACGGCCGCT
CGTTCCTGGGTAGCACTGGAGTTGGTCAGCGGTATGTAGGCTGTGGCGGT
GAAGACGGCGTCTTCGACTATAGCCAGCTGCCGCGACCGGGAGCCAAGGA
GCATCACGACAGCAGTCTGGGGGCAGCATACTGCGTAGGGGGAGATGGCG
GCTTCGTCACATATGACACACCCCAGACAGTGCAGCAGAAGGCGAAATTC
GTCACAAAGATGAAGCTGGGCGGGTTATTCTACTGGCATATTGGAGGCGA
CGCACGGGGACCGCGAAGTCTGATTGAAACAGGGTATAACACATTGCATG
ATATGTAAATGTTCTCCGGCTCCTCCCTCTTTCCGCACTGGCGGCGCAAA
GCAGCCGAACGCTCCAGTAATAGTTCCTACGAGGTGCCCTTCTTCCTGAA
CGCTGCCTATTATCCCAATTGGAGGATATACCGGAAACAGCCTCCGTCGG
CCCTTCGATTGGGCTTCATTTCTCATATCTTCTACGCGTTTGCATGGGTC
AAAGAAGATGGTACCGTTTATCTTAGTGACGAATGGGCCGATGCGCAAAT
GCCCGTCGACGGCACCAACGGCTGCCTGCGGGCCTTCGCGCAACTGAAGC
CGCAGTATTCCAAGATGAAACTCATTCTCTCAGTCGGAGGAGGCGGCAAG
GGCAGTGAGAACTTCGCCCAAGTGGCCCGCAGTCAATCCCGCACCGAGAC
GTTTGTTCGGAGCGCGAGAGCACTGGTGGATCAATTTGGTCTGGACGGCA
TCGACGTGGATTGGGAATACCCCTCCGACCCACAAGAAGGATCGGACTAT
ATCCGTCTGCTGGCGCGACTGCGCGAAGTCCTGCCGGCCCCGCGTTATGT
TCTGGCCTCTTGTCTCCCGGCCGGACCATGGGCTCTCCGTAACATCGATC
TTTCCAAGGCGCAACTCTATCTTGACCTGATCAATATCATGGCGTATGAT
TTCTCGGGCCCTTGGGAGAACCAGTCGGGTCATCAGGCCCAGCTCTTCAG
CAAGCATCCCGCAGCCATTTCATGCCAAAACTCTATCTCGTACGTGCTCA
ACCAGGGCGTCGACCCCAAGAAGCTCCTTCTGGGCATCCCCGCATACGGC
CGCTCGTTCCTGGGTAGCACTGGAGTTGGTCAGCGGTATGTAGGCTGTGG
CGGTGAAGACGGCGTCTTCGACTATAGCCAGCTGCCGCGACCGGGAGCCA
AGGAGCATCACGACAGCAGTCTGGGGGCAGCATACTGCGTAGGGGGAGAT
GGCGGCTTCGTCACATATGACACACCCCAGACAGTGCAGCAGAAGGCGAA
ATTCGTCACAAAGATGAAGCTGGGCGGGTTATTCTACTGGCATATTGGAG
GCGACGCACGGGGACCGCGAAGTCTGATTGAAACAGGGTATAACACATTG
CATGATATGTAAATGTTCTCCGGCTCCTCCCTCTTTCCGCACTGGCGGCG
CAAAGCAGCCGAACGCTCCAGTAATAGTTCCTACGAGGTGCCCTTCTTCC
TGAACGCTGCCTATTATCCCAATTGGAGGATATACCGGAAACAGCCTCCG
TCGGCCCTTCGATTGGGCTTCATTTCTCATATCTTCTACGCGTTTGCATG
GGTCAAAGAAGATGGTACCGTTTATCTTAGTGACGAATGGGCCGATGCGC
AAATGCCCGTCGACGGCACCAACGGCTGCCTGCGGGCCTTCGCGCAACTG
AAGCCGCAGTATTCCAAGATGAAACTCATTCTCTCAGTCGGAGGAGGCGG
CAAGGGCAGTGAGAACTTCGCCCAAGTGGCCCGCAGTCAATCCCGCACCG
AGACGTTTGTTCGGAGCGCGAGAGCACTGGTGGATCAATTTGGTCTGGAC
GGCATCGACGTGGATTGGGAATACCCCTCCGACCCACAAGAAGGATCGGA
CTATATCCGTCTGCTGGCGCGACTGCGCGAAGTCCTGCCGGCCCCGCGTT
ATGTTCTGGCCTCTTGTCTCCCGGCCGGACCATGGGCTCTCCGTAACATC
GATCTTTCCAAGGCGCAACTCTATCTTGACCTGATCAATATCATGGCGTA
TGATTTCTCGGGCCCTTGGGAGAACCAGTCGGGTCATCAGGCCCAGCTCT
TCAGCAAGCATCCCGCAGCCATTTCATGCCAAAACTCTATCTCGTACGTG
CTCAACCAGGGCGTCGACCCCAAGAAGCTCCTTCTGGGCATCCCCGCATA
CGGCCGCTCGTTCCTGGGTAGCACTGGAGTTGGTCAGCGGTATGTAGGCT
GTGGCGGTGAAGACGGCGTCTTCGACTATAGCCAGCTGCCGCGACCGGGA
GCCAAGGAGCATCACGACAGCAGTCTGGGGGCAGCATACTGCGTAGGGGG
AGATGGCGGCTTCGTCACATATGACACACCCCAGACAGTGCAGCAGAAGG
CGAAATTCGTCACAAAGATGAAGCTGGGCGGGTTATTCTACTGGCATATT
GGAGGCGACGCACGGGGACCGCGAAGTCTGATTGAAACAGGGTATAACAC
ATTGCATGATATGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0008061chitin binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001837ATCC10864_001837Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001837-T1.exon1ATCC10864_001837-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_001837-T1.exon2ATCC10864_001837-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001837-T1.exon3ATCC10864_001837-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_001837-T1.exon4ATCC10864_001837-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001837-T1.cdsATCC10864_001837-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001837-T1ATCC10864_001837-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00704
InterProIPR011583
InterProIPR001579
InterProIPR001223
InterProIPR017853
InterProIPR029070
Properties
Property NameValue
NoteCAZy:GH18
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000032supercontigMCQH01000032:123758..125145 +
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