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ATCC10864_001879-T1, ATCC10864_001879-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001879-T1
Unique NameATCC10864_001879-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000036:62884..64594-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001879-T1 ID=ATCC10864_001879-T1|Name=ATCC10864_001879-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1711bp|location=Sequence derived from alignment at MCQH01000036:62884..64594- (Aspergillus niger ATCC 10864)
ATGCCGATGGACTTGGAAAACAACGGGCCGATCAAACCGATCCAGTCGGT
CGACCAGAGCGTCCAAGATGCTCATGATCTTGCGGCCATGGGCCATGACC
AGGCCATGACTCGAAAATTCGATATTTGGAGCATGTTGTCTCTCGCGTTT
TGTGTCTTAGGTTAGTCCTGCCCGATCGTCGGAATTTTTCGTGTGCTCTG
TGCGCGCTGCACCCACCGGGGCGCCAAGAACGGCAGCTAACCGTTGCGAC
CCAGGCACCTACTCTACTTTCGCGCAGGATTTAGATAGCGGACTCACCAA
TGGCGGCTCCGTGACCATTCTCTGGGGTCTCGTGCTGGTCACGGTCTGCA
ACTTGTGTGTCGCAGTTTCGCTTGGAGAGCTCACTAGTAGCATGCCGACC
GCTCTGGGCCAGGCGTATTGGGTGTTTCGACTTTGGGACACCCCGTTGGG
TCGATTTACCTCGTACATGTGCGCATGGATCAACATGTTCGGCTGGTGGA
CCTTGACAGCGTCCCAGGTTGCTTTCATGGCTGAATTTCTGCTGGGAATG
AAAGTTATGTTCGATAATTCATGGGGCGGGGCCAGCACTGGATGGCTAAA
TTTCATCGTCTACATCGGTACAGTCTTGGTGTTGACTGTCATCAACCTAG
TCGGCTGTAGGAAGGAAAAGGTCCTCCCATGGCTCAACAACTTTGTCGGC
ATATGGTTTACCGGCTTGTTCGTCGTCTTGTCACTTGCGCTGCTCATCTC
CGTCGGTGTGAAGAAAGATCTCTCCTTCCAACCTGCGTCTTTCGTCTTTG
GAGCTTGGCTGAACGAAACCGGTTGGGGAAACGGGGTCGTTTGGTTCACG
GGCCTAGTGCAGGCCGCCTATGGTCTTACGGCTTTCGATGCCGTTATCCA
TATGGTCGAGGAGATCCCTGCCCCGCGTCGCAACGCCCCAAAAGTCATGT
GGCTTTCCGTACTCATGGGGGCCATCACTGGTTTTATCTTCATGATGGTG
TGCTTGTTTTGCATTCAGGACATCAACGAGGTTATCAACTCCCCAACCGG
ATTGCCGTTCATGGAGTTGATGGTGGAGACAGTAGGCCTGGAAGGTGGGG
CCACACTCATCGCTTTATTCATCTTTAATGGCCTGGGCCAGGGAATTAGT
ATCCTAACGACCGCTTCTCGACTAACTTGGGGCTTTGCACGAGATGGTGG
CTTACCTTGGAGCGGATACTTCATGCTGGTCGATCCGGTATGGAAGGTTC
CGGCACGAGCACTATGGTTCCAGGGCTTTTGGATTGCATTGGTCGGAATC
CTTTATCTGTTCGCCAACACGGTGCTCGATGCGATCTTGAGTGTTAGTAC
GATCGCTTTGACCATCTCATATGGTCTTCCCATTGCTGCCCTTCTGGTAG
TCGGGCGCGATAAGCTGCCACCAGGCCAGTTCCATCTGGGACGATGGGGG
AAGCTGATCAACTGGGTCAGCATCATCTACTGCATAATCACGACAGTATT
CTTCCTATTCCCAGGGTCCCCGAACCCGTCACCTAGCGATATGAATTATG
CGATTGCTGTGTTTGGAGTGATGCTGGTGGTCGCCGTTGGATTTTGGTTC
GTTCAAGGAAACCGCACGTATTTGAAGACGGAGGATGCCATCGACCAGAT
GATTCAGGCACAGAGGCTTGAAATCAATACGGCGACGCAGGCGCAAGACA
AGAAGAAATAG
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Coding sequence (CDS) from alignment at MCQH01000036:62884..64594-

>ATCC10864_001879-T1 ID=ATCC10864_001879-T1|Name=ATCC10864_001879-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3234bp|location=Sequence derived from alignment at MCQH01000036:62884..64594- (Aspergillus niger ATCC 10864)
GCACCTACTCTACTTTCGCGCAGGATTTAGATAGCGGACTCACCAATGGC
GGCTCCGTGACCATTCTCTGGGGTCTCGTGCTGGTCACGGTCTGCAACTT
GTGTGTCGCAGTTTCGCTTGGAGAGCTCACTAGTAGCATGCCGACCGCTC
TGGGCCAGGCGTATTGGGTGTTTCGACTTTGGGACACCCCGTTGGGTCGA
TTTACCTCGTACATGTGCGCATGGATCAACATGTTCGGCTGGTGGACCTT
GACAGCGTCCCAGGTTGCTTTCATGGCTGAATTTCTGCTGGGAATGAAAG
TTATGTTCGATAATTCATGGGGCGGGGCCAGCACTGGATGGCTAAATTTC
ATCGTCTACATCGGTACAGTCTTGGTGTTGACTGTCATCAACCTAGTCGG
CTGTAGGAAGGAAAAGGTCCTCCCATGGCTCAACAACTTTGTCGGCATAT
GGTTTACCGGCTTGTTCGTCGTCTTGTCACTTGCGCTGCTCATCTCCGTC
GGTGTGAAGAAAGATCTCTCCTTCCAACCTGCGTCTTTCGTCTTTGGAGC
TTGGCTGAACGAAACCGGTTGGGGAAACGGGGTCGTTTGGTTCACGGGCC
TAGTGCAGGCCGCCTATGGTCTTACGGCTTTCGATGCCGTTATCCATATG
GTCGAGGAGATCCCTGCCCCGCGTCGCAACGCCCCAAAAGTCATGTGGCT
TTCCGTACTCATGGGGGCCATCACTGGTTTTATCTTCATGATGGTGTGCT
TGTTTTGCATTCAGGACATCAACGAGGTTATCAACTCCCCAACCGGATTG
CCGTTCATGGAGTTGATGGTGGAGACAGTAGGCCTGGAAGGTGGGGCCAC
ACTCATCGCTTTATTCATCTTTAATGGCCTGGGCCAGGGAATTAGTATCC
TAACGACCGCTTCTCGACTAACTTGGGGCTTTGCACGAGATGGTGGCTTA
CCTTGGAGCGGATACTTCATGCTGGTCGATCCGGTATGGAAGGTTCCGGC
ACGAGCACTATGGTTCCAGGGCTTTTGGATTGCATTGGTCGGAATCCTTT
ATCTGTTCGCCAACACGGTGCTCGATGCGATCTTGAGTGTTAGTACGATC
GCTTTGACCATCTCATATGGTCTTCCCATTGCTGCCCTTCTGGTAGTCGG
GCGCGATAAGCTGCCACCAGGCCAGTTCCATCTGGGACGATGGGGGAAGC
TGATCAACTGGGTCAGCATCATCTACTGCATAATCACGACAGTATTCTTC
CTATTCCCAGGGTCCCCGAACCCGTCACCTAGCGATATGAATTATGCGAT
TGCTGTGTTTGGAGTGATGCTGGTGGTCGCCGTTGGATTTTGGTTCGTTC
AAGGAAACCGCACGTATTTGAAGACGGAGGATGCCATCGACCAGATGATT
CAGGCACAGAGGCTTGAAATCAATACGGCGACGCAGGCGCAAGACAAGAA
GAAATAGATGCCGATGGACTTGGAAAACAACGGGCCGATCAAACCGATCC
AGTCGGTCGACCAGAGCGTCCAAGATGCTCATGATCTTGCGGCCATGGGC
CATGACCAGGCCATGACTCGAAAATTCGATATTTGGAGCATGTTGTCTCT
CGCGTTTTGTGTCTTAGGCACCTACTCTACTTTCGCGCAGGATTTAGATA
GCGGACTCACCAATGGCGGCTCCGTGACCATTCTCTGGGGTCTCGTGCTG
GTCACGGTCTGCAACTTGTGTGTCGCAGTTTCGCTTGGAGAGCTCACTAG
TAGCATGCCGACCGCTCTGGGCCAGGCGTATTGGGTGTTTCGACTTTGGG
ACACCCCGTTGGGTCGATTTACCTCGTACATGTGCGCATGGATCAACATG
TTCGGCTGGTGGACCTTGACAGCGTCCCAGGTTGCTTTCATGGCTGAATT
TCTGCTGGGAATGAAAGTTATGTTCGATAATTCATGGGGCGGGGCCAGCA
CTGGATGGCTAAATTTCATCGTCTACATCGGTACAGTCTTGGTGTTGACT
GTCATCAACCTAGTCGGCTGTAGGAAGGAAAAGGTCCTCCCATGGCTCAA
CAACTTTGTCGGCATATGGTTTACCGGCTTGTTCGTCGTCTTGTCACTTG
CGCTGCTCATCTCCGTCGGTGTGAAGAAAGATCTCTCCTTCCAACCTGCG
TCTTTCGTCTTTGGAGCTTGGCTGAACGAAACCGGTTGGGGAAACGGGGT
CGTTTGGTTCACGGGCCTAGTGCAGGCCGCCTATGGTCTTACGGCTTTCG
ATGCCGTTATCCATATGGTCGAGGAGATCCCTGCCCCGCGTCGCAACGCC
CCAAAAGTCATGTGGCTTTCCGTACTCATGGGGGCCATCACTGGTTTTAT
CTTCATGATGGTGTGCTTGTTTTGCATTCAGGACATCAACGAGGTTATCA
ACTCCCCAACCGGATTGCCGTTCATGGAGTTGATGGTGGAGACAGTAGGC
CTGGAAGGTGGGGCCACACTCATCGCTTTATTCATCTTTAATGGCCTGGG
CCAGGGAATTAGTATCCTAACGACCGCTTCTCGACTAACTTGGGGCTTTG
CACGAGATGGTGGCTTACCTTGGAGCGGATACTTCATGCTGGTCGATCCG
GTATGGAAGGTTCCGGCACGAGCACTATGGTTCCAGGGCTTTTGGATTGC
ATTGGTCGGAATCCTTTATCTGTTCGCCAACACGGTGCTCGATGCGATCT
TGAGTGTTAGTACGATCGCTTTGACCATCTCATATGGTCTTCCCATTGCT
GCCCTTCTGGTAGTCGGGCGCGATAAGCTGCCACCAGGCCAGTTCCATCT
GGGACGATGGGGGAAGCTGATCAACTGGGTCAGCATCATCTACTGCATAA
TCACGACAGTATTCTTCCTATTCCCAGGGTCCCCGAACCCGTCACCTAGC
GATATGAATTATGCGATTGCTGTGTTTGGAGTGATGCTGGTGGTCGCCGT
TGGATTTTGGTTCGTTCAAGGAAACCGCACGTATTTGAAGACGGAGGATG
CCATCGACCAGATGATTCAGGCACAGAGGCTTGAAATCAATACGGCGACG
CAGGCGCAAGACAAGAAGAAATAGATGCCGATGGACTTGGAAAACAACGG
GCCGATCAAACCGATCCAGTCGGTCGACCAGAGCGTCCAAGATGCTCATG
ATCTTGCGGCCATGGGCCATGACCAGGCCATGACTCGAAAATTCGATATT
TGGAGCATGTTGTCTCTCGCGTTTTGTGTCTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001879ATCC10864_001879Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001879-T1ATCC10864_001879-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001879-T1.cdsATCC10864_001879-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001879-T1.exon2ATCC10864_001879-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001879-T1.exon1ATCC10864_001879-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF13520
PFAMPF00324
InterProIPR002293
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000036supercontigMCQH01000036:62884..64594 -
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