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ATCC10864_002006-T1, ATCC10864_002006-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002006-T1
Unique NameATCC10864_002006-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000048:33527..35737+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002006-T1 ID=ATCC10864_002006-T1|Name=ATCC10864_002006-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2211bp|location=Sequence derived from alignment at MCQH01000048:33527..35737+ (Aspergillus niger ATCC 10864)
ATGGTTTCTCCAGCCAGTGGGAAACGCCGACTGCGCGCCTCCAAGGCGTG
TCAGAGATGCAGTCGGCGCAAGGTCAAGTGTGATGTTGCTGATCTGGGCT
GCCCTTGCAGCCGCTGCCGCATGGATAACATCACCGAGTGTACATTGGTA
ACCTCCCGTCGAGGCACCTATGACCGAACAAGCTTTCGACGACAGACAGT
GAGGACTGCACCATCTGCATCATCAACGTCACCACCGCCAACGTTACAGC
CATCATCGCAGGTTCCTGAAGCTATCCTGACTGCATCGTCAACCCGGTCA
ACTGCATCGAGCGTCCGGAGTCCCGTGCAGGGTCTGCCCTCGCGCCAGTT
CGTGAGCGAAGAAAACCGTCCAAACTCCACTTTCGCAGCAGACCGGCCGG
AGATCATTTCAAATATGGAACAACCAGTCAGCGATCCTCATGCTGTAGAT
TTGACGCGTCCGCCTGATAGTGCACCATCAGCCTCCGCGACAGACCTGTC
GGATCACCGATCACTATCAACAAGGTTCGAAGAATTCCTCGGCCAGGTGG
GGCACCGAAGTTTGTGCAATCCGAAGCTAGTTTTGTTCGGAGAGCCTTCA
CCTTTAACCTTTGCCCTGAAGCTGCAGAAAGGCATCCACTCGGATCTCCA
TGATGCGAGCCAACGCGCCTTAACTAGTGATTCGCTGACTGTTGTCGAGG
ACAATGTTCATCCGGAACACCTACTTCCGCATGACGTTGACTGTTTGAAA
GCAAAGGGGGCGTTCATTTACCCGGAGCCGAACATTCTGGAGGAGATGAT
CAACGCTTTTCTGGAGCATTTCTACCCTTTATACTCCGTCGTGGATCCAA
TAGATCTGCGCAAGGCGCAGCAAGAGCGGAAACTGCCATGGATCCTGCTT
CATTCAATCTGTTTCGTCGCAATGACTTTCTGCGAGCCTGCGCTGATCTT
TAAGGCCGGGTTTAGCTCTCGTGCACAAGCACGTAAGGTCTACTACGACC
GTGCCAAGGCTCTCTTTGACTTCAACTACGAGAACCGTAAGATAATCCTA
GTCAAGGTGGCGATCCTGCTCAGCTTTAAGGGCCCTCAGATGGATTGTTA
CTGGAATCCGTGCTCGTGGATTGAGATCGGGGTGACCATGGCGGTGGCCA
TGGGACTGCACCGCAGGTCTATTGCAATGAGCGGGAACTCTCGTGACAAA
GGTCTGCTTAGACGATTATGGTGGACATTAGTTATCCGTGATACCCATTG
TTCCGCCCTTCTTGGTCGACCATTTCGGATAAACATGTCCCAGGTTGATA
TTGAAATGTTAGCGGAGGATGACTTTCCCAACGTGCACACATGCCGATCA
CAAACAACGTCATCAAGCTGCAACTGTCGCCAGTCAATTGAATACCAGAT
ACAGGCCACAAAGCTATCCCTTATTCTTCGAGAAATCATGTTCTTCCGCT
TCGGGCCGACAAGTGGAAGCTCGACTACTAATCACATCCACGAGCAATTG
GACCGCTGGAAAGCACAGCTCCCCCCTCTCATGCAGTGCCACAGGGGCCA
ATTCTCTACGTCAATCTTTGCTCTGCAACTCGACATCCTGCTAAATTACC
ACATTATGCTCCTCCACATGGACCGACACCTAGAATCGAAACCTATTGAC
TCGTCACTCCCAACCCCAATGTCTAGCAGCTACAACTCCACCGCAATTAC
CGAGTCAGCAGCCCTAGCCGTTTCATCAAGTGCTATTAAGCTAATGACAC
GGACTTCCATCAGCGACGTTCCTCATGAAGTCTTCCCTGGGTTTTTTGTG
GCAGGGATCGTCCTCTACCAACAGGCACATCGGACGCAAGACAACCACTT
CGCAAGCATGGTCCGTGCAAGCTTCGATAACTGCCAAATGCTCCTAAGCC
AAGCCCAAAATACTTGGGACCCCGGGGTGTGGGCGATGAGGGTATTTGAG
TTCCTTTTGTTTGCCGCCGACGCAGCCGACGCAGCAGAAGCCACAAGGGC
ATCGGGAGACACTCACGGCTACCAACCAAACACTACATCTTTGGACACTA
ACACTACTCCATATACACAACCTTCCCATCCAATGAACTCCGACATGGAA
AGTTCAATCTGGTCAGACATCCCCAACATGGAATTTGATCGGAATGTGAC
AATGGATTTGGCGGAATACATGCTTTTGCCCAATTTTTTCACTGCACCGT
TCGGTAACTAG
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Coding sequence (CDS) from alignment at MCQH01000048:33527..35737+

>ATCC10864_002006-T1 ID=ATCC10864_002006-T1|Name=ATCC10864_002006-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2211bp|location=Sequence derived from alignment at MCQH01000048:33527..35737+ (Aspergillus niger ATCC 10864)
ATGGTTTCTCCAGCCAGTGGGAAACGCCGACTGCGCGCCTCCAAGGCGTG
TCAGAGATGCAGTCGGCGCAAGGTCAAGTGTGATGTTGCTGATCTGGGCT
GCCCTTGCAGCCGCTGCCGCATGGATAACATCACCGAGTGTACATTGGTA
ACCTCCCGTCGAGGCACCTATGACCGAACAAGCTTTCGACGACAGACAGT
GAGGACTGCACCATCTGCATCATCAACGTCACCACCGCCAACGTTACAGC
CATCATCGCAGGTTCCTGAAGCTATCCTGACTGCATCGTCAACCCGGTCA
ACTGCATCGAGCGTCCGGAGTCCCGTGCAGGGTCTGCCCTCGCGCCAGTT
CGTGAGCGAAGAAAACCGTCCAAACTCCACTTTCGCAGCAGACCGGCCGG
AGATCATTTCAAATATGGAACAACCAGTCAGCGATCCTCATGCTGTAGAT
TTGACGCGTCCGCCTGATAGTGCACCATCAGCCTCCGCGACAGACCTGTC
GGATCACCGATCACTATCAACAAGGTTCGAAGAATTCCTCGGCCAGGTGG
GGCACCGAAGTTTGTGCAATCCGAAGCTAGTTTTGTTCGGAGAGCCTTCA
CCTTTAACCTTTGCCCTGAAGCTGCAGAAAGGCATCCACTCGGATCTCCA
TGATGCGAGCCAACGCGCCTTAACTAGTGATTCGCTGACTGTTGTCGAGG
ACAATGTTCATCCGGAACACCTACTTCCGCATGACGTTGACTGTTTGAAA
GCAAAGGGGGCGTTCATTTACCCGGAGCCGAACATTCTGGAGGAGATGAT
CAACGCTTTTCTGGAGCATTTCTACCCTTTATACTCCGTCGTGGATCCAA
TAGATCTGCGCAAGGCGCAGCAAGAGCGGAAACTGCCATGGATCCTGCTT
CATTCAATCTGTTTCGTCGCAATGACTTTCTGCGAGCCTGCGCTGATCTT
TAAGGCCGGGTTTAGCTCTCGTGCACAAGCACGTAAGGTCTACTACGACC
GTGCCAAGGCTCTCTTTGACTTCAACTACGAGAACCGTAAGATAATCCTA
GTCAAGGTGGCGATCCTGCTCAGCTTTAAGGGCCCTCAGATGGATTGTTA
CTGGAATCCGTGCTCGTGGATTGAGATCGGGGTGACCATGGCGGTGGCCA
TGGGACTGCACCGCAGGTCTATTGCAATGAGCGGGAACTCTCGTGACAAA
GGTCTGCTTAGACGATTATGGTGGACATTAGTTATCCGTGATACCCATTG
TTCCGCCCTTCTTGGTCGACCATTTCGGATAAACATGTCCCAGGTTGATA
TTGAAATGTTAGCGGAGGATGACTTTCCCAACGTGCACACATGCCGATCA
CAAACAACGTCATCAAGCTGCAACTGTCGCCAGTCAATTGAATACCAGAT
ACAGGCCACAAAGCTATCCCTTATTCTTCGAGAAATCATGTTCTTCCGCT
TCGGGCCGACAAGTGGAAGCTCGACTACTAATCACATCCACGAGCAATTG
GACCGCTGGAAAGCACAGCTCCCCCCTCTCATGCAGTGCCACAGGGGCCA
ATTCTCTACGTCAATCTTTGCTCTGCAACTCGACATCCTGCTAAATTACC
ACATTATGCTCCTCCACATGGACCGACACCTAGAATCGAAACCTATTGAC
TCGTCACTCCCAACCCCAATGTCTAGCAGCTACAACTCCACCGCAATTAC
CGAGTCAGCAGCCCTAGCCGTTTCATCAAGTGCTATTAAGCTAATGACAC
GGACTTCCATCAGCGACGTTCCTCATGAAGTCTTCCCTGGGTTTTTTGTG
GCAGGGATCGTCCTCTACCAACAGGCACATCGGACGCAAGACAACCACTT
CGCAAGCATGGTCCGTGCAAGCTTCGATAACTGCCAAATGCTCCTAAGCC
AAGCCCAAAATACTTGGGACCCCGGGGTGTGGGCGATGAGGGTATTTGAG
TTCCTTTTGTTTGCCGCCGACGCAGCCGACGCAGCAGAAGCCACAAGGGC
ATCGGGAGACACTCACGGCTACCAACCAAACACTACATCTTTGGACACTA
ACACTACTCCATATACACAACCTTCCCATCCAATGAACTCCGACATGGAA
AGTTCAATCTGGTCAGACATCCCCAACATGGAATTTGATCGGAATGTGAC
AATGGATTTGGCGGAATACATGCTTTTGCCCAATTTTTTCACTGCACCGT
TCGGTAACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002006ATCC10864_002006Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002006-T1.exon1ATCC10864_002006-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002006-T1.cdsATCC10864_002006-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002006-T1ATCC10864_002006-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00172
InterProIPR001138
PFAMPF04082
InterProIPR036864
InterProIPR007219
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000048supercontigMCQH01000048:33527..35737 +
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