You are here

Home

ATCC10864_002013-T1, ATCC10864_002013-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002013-T1
Unique NameATCC10864_002013-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000048:48596..49597-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002013-T1 ID=ATCC10864_002013-T1|Name=ATCC10864_002013-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1002bp|location=Sequence derived from alignment at MCQH01000048:48596..49597- (Aspergillus niger ATCC 10864)
ATGCCAGGTACGTGTAGCACCTCCACGTCTGCAAATCTGCCGTTTAATGA
CTGACCCAATCCTAGAGGATGATGATGTTCTAAGTCCTATCTCCTGCGAG
GTATGCAGGCAGCGGAAATGCAAGGTGAGTTAAACTTTCGTTCATCTACT
ATTTCTGCAGCGTTAATACCCACATAGTGCGATCGGAGACTGTATGGCGA
ACCTATGAAAATGATATTCCACCTTAAGCGTCGGACTTTGTTGGTCTCTG
ACATACACCTGTAGCCCTTTTTGCTCTCAATGCTCCAATGAATCATCAAA
ATGCAAATACCCTGAAAGCGGCAAGAGGTATGACCATCTCTCTGCGAGAG
ACCCGCACTCCACAGCTAACCAATATTCAATAGAGGTCTACCTCTCGGAT
ATCTCAATCAATTAGAGCAAAGACTTGCAGAAACCGAGTCGGCCCTTTAT
GGTGCTCTCATGGCATTGAGCTCGATGGGACCAGCAACCACTCTGCTCCA
AGCCACTACGAAGCCGGATTCGTTACAAAAATCGAAAGCTGCACGAATGG
AGGAATGGTCGCGATTGCCGCTTCGAGATTGGCCTGACATATACCACTGG
AAGGCGTCCATGAGCGATCAATTTACCCTCAACCAGTTGCAAGGGGAACC
GCTCGTGGAAAGTTCTGCAGTTAGTCATGCCGTTTCAGCTTCGCCTGTGG
CAACTACTGCCCACAGCCACAGCCCTCAAGGTGAAATAGAAGCCCCGGTA
CCGGCTAGTTTTGCTTGGCACCCAGGAGAAGGTGTCCACATGAATAGTCC
TTATAACGTCTACCTCCAACCCCCTGGAATGGTGTCTTCTCCGGTATACC
CAAGAGACCCAGCTTCCGGGTCAACTGGGGCTATAATTAATCCTTTTCCC
GATTATAGTAACGCCACGGCGACGGGGGATAGTGGGAAACAAAATGATCA
CTCCACGATGGCGGACGAGCTGTCTAAAAGCAAGCCGAGTATATACTTTT
GA
back to top

Coding sequence (CDS) from alignment at MCQH01000048:48596..49597-

>ATCC10864_002013-T1 ID=ATCC10864_002013-T1|Name=ATCC10864_002013-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3810bp|location=Sequence derived from alignment at MCQH01000048:48596..49597- (Aspergillus niger ATCC 10864)
AGGTCTACCTCTCGGATATCTCAATCAATTAGAGCAAAGACTTGCAGAAA
CCGAGTCGGCCCTTTATGGTGCTCTCATGGCATTGAGCTCGATGGGACCA
GCAACCACTCTGCTCCAAGCCACTACGAAGCCGGATTCGTTACAAAAATC
GAAAGCTGCACGAATGGAGGAATGGTCGCGATTGCCGCTTCGAGATTGGC
CTGACATATACCACTGGAAGGCGTCCATGAGCGATCAATTTACCCTCAAC
CAGTTGCAAGGGGAACCGCTCGTGGAAAGTTCTGCAGTTAGTCATGCCGT
TTCAGCTTCGCCTGTGGCAACTACTGCCCACAGCCACAGCCCTCAAGGTG
AAATAGAAGCCCCGGTACCGGCTAGTTTTGCTTGGCACCCAGGAGAAGGT
GTCCACATGAATAGTCCTTATAACGTCTACCTCCAACCCCCTGGAATGGT
GTCTTCTCCGGTATACCCAAGAGACCCAGCTTCCGGGTCAACTGGGGCTA
TAATTAATCCTTTTCCCGATTATAGTAACGCCACGGCGACGGGGGATAGT
GGGAAACAAAATGATCACTCCACGATGGCGGACGAGCTGTCTAAAAGCAA
GCCGAGTATATACTTTTGACCCTTTTTGCTCTCAATGCTCCAATGAATCA
TCAAAATGCAAATACCCTGAAAGCGGCAAGAGTGCGATCGGAGACTAGGA
TGATGATGTTCTAAGTCCTATCTCCTGCGAGGTATGCAGGCAGCGGAAAT
GCAAGATGCCAGAGGTCTACCTCTCGGATATCTCAATCAATTAGAGCAAA
GACTTGCAGAAACCGAGTCGGCCCTTTATGGTGCTCTCATGGCATTGAGC
TCGATGGGACCAGCAACCACTCTGCTCCAAGCCACTACGAAGCCGGATTC
GTTACAAAAATCGAAAGCTGCACGAATGGAGGAATGGTCGCGATTGCCGC
TTCGAGATTGGCCTGACATATACCACTGGAAGGCGTCCATGAGCGATCAA
TTTACCCTCAACCAGTTGCAAGGGGAACCGCTCGTGGAAAGTTCTGCAGT
TAGTCATGCCGTTTCAGCTTCGCCTGTGGCAACTACTGCCCACAGCCACA
GCCCTCAAGGTGAAATAGAAGCCCCGGTACCGGCTAGTTTTGCTTGGCAC
CCAGGAGAAGGTGTCCACATGAATAGTCCTTATAACGTCTACCTCCAACC
CCCTGGAATGGTGTCTTCTCCGGTATACCCAAGAGACCCAGCTTCCGGGT
CAACTGGGGCTATAATTAATCCTTTTCCCGATTATAGTAACGCCACGGCG
ACGGGGGATAGTGGGAAACAAAATGATCACTCCACGATGGCGGACGAGCT
GTCTAAAAGCAAGCCGAGTATATACTTTTGACCCTTTTTGCTCTCAATGC
TCCAATGAATCATCAAAATGCAAATACCCTGAAAGCGGCAAGAGTGCGAT
CGGAGACTAGGATGATGATGTTCTAAGTCCTATCTCCTGCGAGGTATGCA
GGCAGCGGAAATGCAAGATGCCAGAGGTCTACCTCTCGGATATCTCAATC
AATTAGAGCAAAGACTTGCAGAAACCGAGTCGGCCCTTTATGGTGCTCTC
ATGGCATTGAGCTCGATGGGACCAGCAACCACTCTGCTCCAAGCCACTAC
GAAGCCGGATTCGTTACAAAAATCGAAAGCTGCACGAATGGAGGAATGGT
CGCGATTGCCGCTTCGAGATTGGCCTGACATATACCACTGGAAGGCGTCC
ATGAGCGATCAATTTACCCTCAACCAGTTGCAAGGGGAACCGCTCGTGGA
AAGTTCTGCAGTTAGTCATGCCGTTTCAGCTTCGCCTGTGGCAACTACTG
CCCACAGCCACAGCCCTCAAGGTGAAATAGAAGCCCCGGTACCGGCTAGT
TTTGCTTGGCACCCAGGAGAAGGTGTCCACATGAATAGTCCTTATAACGT
CTACCTCCAACCCCCTGGAATGGTGTCTTCTCCGGTATACCCAAGAGACC
CAGCTTCCGGGTCAACTGGGGCTATAATTAATCCTTTTCCCGATTATAGT
AACGCCACGGCGACGGGGGATAGTGGGAAACAAAATGATCACTCCACGAT
GGCGGACGAGCTGTCTAAAAGCAAGCCGAGTATATACTTTTGACCCTTTT
TGCTCTCAATGCTCCAATGAATCATCAAAATGCAAATACCCTGAAAGCGG
CAAGAGTGCGATCGGAGACTAGGATGATGATGTTCTAAGTCCTATCTCCT
GCGAGGTATGCAGGCAGCGGAAATGCAAGATGCCAGAGGTCTACCTCTCG
GATATCTCAATCAATTAGAGCAAAGACTTGCAGAAACCGAGTCGGCCCTT
TATGGTGCTCTCATGGCATTGAGCTCGATGGGACCAGCAACCACTCTGCT
CCAAGCCACTACGAAGCCGGATTCGTTACAAAAATCGAAAGCTGCACGAA
TGGAGGAATGGTCGCGATTGCCGCTTCGAGATTGGCCTGACATATACCAC
TGGAAGGCGTCCATGAGCGATCAATTTACCCTCAACCAGTTGCAAGGGGA
ACCGCTCGTGGAAAGTTCTGCAGTTAGTCATGCCGTTTCAGCTTCGCCTG
TGGCAACTACTGCCCACAGCCACAGCCCTCAAGGTGAAATAGAAGCCCCG
GTACCGGCTAGTTTTGCTTGGCACCCAGGAGAAGGTGTCCACATGAATAG
TCCTTATAACGTCTACCTCCAACCCCCTGGAATGGTGTCTTCTCCGGTAT
ACCCAAGAGACCCAGCTTCCGGGTCAACTGGGGCTATAATTAATCCTTTT
CCCGATTATAGTAACGCCACGGCGACGGGGGATAGTGGGAAACAAAATGA
TCACTCCACGATGGCGGACGAGCTGTCTAAAAGCAAGCCGAGTATATACT
TTTGACCCTTTTTGCTCTCAATGCTCCAATGAATCATCAAAATGCAAATA
CCCTGAAAGCGGCAAGAGTGCGATCGGAGACTAGGATGATGATGTTCTAA
GTCCTATCTCCTGCGAGGTATGCAGGCAGCGGAAATGCAAGATGCCAGAG
GTCTACCTCTCGGATATCTCAATCAATTAGAGCAAAGACTTGCAGAAACC
GAGTCGGCCCTTTATGGTGCTCTCATGGCATTGAGCTCGATGGGACCAGC
AACCACTCTGCTCCAAGCCACTACGAAGCCGGATTCGTTACAAAAATCGA
AAGCTGCACGAATGGAGGAATGGTCGCGATTGCCGCTTCGAGATTGGCCT
GACATATACCACTGGAAGGCGTCCATGAGCGATCAATTTACCCTCAACCA
GTTGCAAGGGGAACCGCTCGTGGAAAGTTCTGCAGTTAGTCATGCCGTTT
CAGCTTCGCCTGTGGCAACTACTGCCCACAGCCACAGCCCTCAAGGTGAA
ATAGAAGCCCCGGTACCGGCTAGTTTTGCTTGGCACCCAGGAGAAGGTGT
CCACATGAATAGTCCTTATAACGTCTACCTCCAACCCCCTGGAATGGTGT
CTTCTCCGGTATACCCAAGAGACCCAGCTTCCGGGTCAACTGGGGCTATA
ATTAATCCTTTTCCCGATTATAGTAACGCCACGGCGACGGGGGATAGTGG
GAAACAAAATGATCACTCCACGATGGCGGACGAGCTGTCTAAAAGCAAGC
CGAGTATATACTTTTGACCCTTTTTGCTCTCAATGCTCCAATGAATCATC
AAAATGCAAATACCCTGAAAGCGGCAAGAGTGCGATCGGAGACTAGGATG
ATGATGTTCTAAGTCCTATCTCCTGCGAGGTATGCAGGCAGCGGAAATGC
AAGATGCCAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002013ATCC10864_002013Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002013-T1ATCC10864_002013-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002013-T1.cdsATCC10864_002013-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002013-T1.exon5ATCC10864_002013-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_002013-T1.exon4ATCC10864_002013-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_002013-T1.exon3ATCC10864_002013-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_002013-T1.exon2ATCC10864_002013-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_002013-T1.exon1ATCC10864_002013-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR001138
PFAMPF00172
InterProIPR036864
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000048supercontigMCQH01000048:48596..49597 -
Powered by Drupal