|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000048:226258..228076- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_002082-T1 ID=ATCC10864_002082-T1|Name=ATCC10864_002082-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1819bp|location=Sequence derived from alignment at MCQH01000048:226258..228076- (Aspergillus niger ATCC 10864)
ATGGCTGAAGGCTTCGTTGACGCCTCGCGCGTCGAGGCCCCAGTCACCCT
CAAGACCTACTTGATGTGTGCCTTTGCGGCTTTTGGTGGTATCTTCTTCG
GTTATGACTCTGGTTATATCAGCGGTGTCATGGGAATGAGATACTTCATC
GAGGAGTTTGAGGGCTTGGTACGTAGCGTCGTTGCATCAAACTATTATGA
AGCGGGAGGGACTGACTTCGATGTAGGACTATAACACTACCCCCACCGAT
TCCTTCGTCCTCCCGTCCTGGAAAAAATCGTTGATCACGTCGATCCTCTC
GGCTGGAACCTTCTTTGGTGCCCTCATTGCTGGTGACTTGGCAGACTGGT
TCGGTCGTCGCACTACCATTGTCAGTGGTTGTGTTGTCTTCATCGTTGGT
GTTATCCTGCAGACCGCTTCGACCTCCTTGGGTCTGCTTGTTGCCGGCCG
TCTGGTCGCGGGATTTGGTGTGGGCTTCGTCTCCGCCATCATTATCCTGT
ACATGTCTGAGATTGCACCTCGCAAGGTTCGCGGTGCTATTGTCTCAGGG
TACCAGTTCTGCATCACCATCGGGCTCATGTTGGCCTCGTGCGTCGACTA
CGGCACTGAGAACCGTCTCGACTCTGGCTCCTACCGTATCCCAATCGGCC
TCCAGCTCGCCTGGGCCTTGATCCTGGGAGGTGGTCTGCTCTGCCTGCCC
GAGTCCCCTCGTTACTTTGTTAAAAAGGGCGACCTGGCTAAGGCTGCGGA
GGTTCTTGCCCGCGTTCGTGGTCAACCCCAAGACTCGGATTATATCAAGG
ATGAGCTGGCGGAGATTGTGGCAAATCATGAGTACGAGATGCAGGTGATT
CCGGAAGGTGGATATTTCGTCAGCTGGATGAACTGCTTCCGTGGCAGTAT
ATTCTCGCCCAACAGCAATCTCCGTCGGACTGTCCTAGGTACTTCTCTGC
AGATGATGCAACAGTAAGTCTCAACCTTGCCACACACACACACACACACA
CACACAGAAAGGGAAAGAAATACTGACCGTCCTCTAGGTGGACCGGTGTC
AACTTTGTCTTCTACTTTGGAACGACCTTTTTCCAGTCGGTGAGTAAGCT
CGATCTGTGCTTGAGATGATGCGCTGACGGAGTTATAGCTGGGAACCATC
GATGACCCCTTCCTCATCAGCATGATTACCACTATCGTCAACGTCTGCTC
GACCCCCGTCTCGTTCTACACAATTGAGAAGTTTGGCCGCCGTTCGCTCC
TTTTGTGGGGAGCACTTGGTATGGTCATCTGCCAGTTCATTGTCGCTATC
GTCGGCACCGTGGACGGTAGCAATAAGCACGCTGTCAGTGCAGAGATTTC
TTTCATCTGCATTTACATCTTCTTCTTTGCTAGCACGTGGGGCCCGGGCG
CCTGGGTTGTGATTGGCGAGATTTTCCCCCTACCTATTCGGTCGCGTGGT
GTGGCTCTGTCGACGGCATCGAACTGGCTGTGGAATTGCGTAAGTAGATT
GCTCCCCTATTGATGAAACATGCTGACCGGTCAGATCATCGCTGTCATCA
CCCCTTACATGGTCGACAAGGACAAGGGTGACTTGAAGGCCAAGGTGTTC
TTCATCTGGGGCTCGCTGTGTGCCTGCGCTTTTGTCTACACGTACTTCCT
AATTCCGGAGACCAAGGGTCTTACTCTTGAGCAGGTGGACAAGATGATGG
AAGAGACCACGCCTCGCACCTCAGCTAAGTGGACTCCACATGGCACCTTC
ACGGCCGAGATGGGTCTTACTGCGAATGCCGTGGCCGAAAAGGCTACTGC
GGTTCACCAGGAGGTGTGA back to topCoding sequence (CDS) from alignment at MCQH01000048:226258..228076- >ATCC10864_002082-T1 ID=ATCC10864_002082-T1|Name=ATCC10864_002082-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=7965bp|location=Sequence derived from alignment at MCQH01000048:226258..228076- (Aspergillus niger ATCC 10864)
ATCATCGCTGTCATCACCCCTTACATGGTCGACAAGGACAAGGGTGACTT
GAAGGCCAAGGTGTTCTTCATCTGGGGCTCGCTGTGTGCCTGCGCTTTTG
TCTACACGTACTTCCTAATTCCGGAGACCAAGGGTCTTACTCTTGAGCAG
GTGGACAAGATGATGGAAGAGACCACGCCTCGCACCTCAGCTAAGTGGAC
TCCACATGGCACCTTCACGGCCGAGATGGGTCTTACTGCGAATGCCGTGG
CCGAAAAGGCTACTGCGGTTCACCAGGAGGTGTGACTGGGAACCATCGAT
GACCCCTTCCTCATCAGCATGATTACCACTATCGTCAACGTCTGCTCGAC
CCCCGTCTCGTTCTACACAATTGAGAAGTTTGGCCGCCGTTCGCTCCTTT
TGTGGGGAGCACTTGGTATGGTCATCTGCCAGTTCATTGTCGCTATCGTC
GGCACCGTGGACGGTAGCAATAAGCACGCTGTCAGTGCAGAGATTTCTTT
CATCTGCATTTACATCTTCTTCTTTGCTAGCACGTGGGGCCCGGGCGCCT
GGGTTGTGATTGGCGAGATTTTCCCCCTACCTATTCGGTCGCGTGGTGTG
GCTCTGTCGACGGCATCGAACTGGCTGTGGAATTGCGTGGACCGGTGTCA
ACTTTGTCTTCTACTTTGGAACGACCTTTTTCCAGTCGGACTATAACACT
ACCCCCACCGATTCCTTCGTCCTCCCGTCCTGGAAAAAATCGTTGATCAC
GTCGATCCTCTCGGCTGGAACCTTCTTTGGTGCCCTCATTGCTGGTGACT
TGGCAGACTGGTTCGGTCGTCGCACTACCATTGTCAGTGGTTGTGTTGTC
TTCATCGTTGGTGTTATCCTGCAGACCGCTTCGACCTCCTTGGGTCTGCT
TGTTGCCGGCCGTCTGGTCGCGGGATTTGGTGTGGGCTTCGTCTCCGCCA
TCATTATCCTGTACATGTCTGAGATTGCACCTCGCAAGGTTCGCGGTGCT
ATTGTCTCAGGGTACCAGTTCTGCATCACCATCGGGCTCATGTTGGCCTC
GTGCGTCGACTACGGCACTGAGAACCGTCTCGACTCTGGCTCCTACCGTA
TCCCAATCGGCCTCCAGCTCGCCTGGGCCTTGATCCTGGGAGGTGGTCTG
CTCTGCCTGCCCGAGTCCCCTCGTTACTTTGTTAAAAAGGGCGACCTGGC
TAAGGCTGCGGAGGTTCTTGCCCGCGTTCGTGGTCAACCCCAAGACTCGG
ATTATATCAAGGATGAGCTGGCGGAGATTGTGGCAAATCATGAGTACGAG
ATGCAGGTGATTCCGGAAGGTGGATATTTCGTCAGCTGGATGAACTGCTT
CCGTGGCAGTATATTCTCGCCCAACAGCAATCTCCGTCGGACTGTCCTAG
GTACTTCTCTGCAGATGATGCAACAATGGCTGAAGGCTTCGTTGACGCCT
CGCGCGTCGAGGCCCCAGTCACCCTCAAGACCTACTTGATGTGTGCCTTT
GCGGCTTTTGGTGGTATCTTCTTCGGTTATGACTCTGGTTATATCAGCGG
TGTCATGGGAATGAGATACTTCATCGAGGAGTTTGAGGGCTTGATCATCG
CTGTCATCACCCCTTACATGGTCGACAAGGACAAGGGTGACTTGAAGGCC
AAGGTGTTCTTCATCTGGGGCTCGCTGTGTGCCTGCGCTTTTGTCTACAC
GTACTTCCTAATTCCGGAGACCAAGGGTCTTACTCTTGAGCAGGTGGACA
AGATGATGGAAGAGACCACGCCTCGCACCTCAGCTAAGTGGACTCCACAT
GGCACCTTCACGGCCGAGATGGGTCTTACTGCGAATGCCGTGGCCGAAAA
GGCTACTGCGGTTCACCAGGAGGTGTGACTGGGAACCATCGATGACCCCT
TCCTCATCAGCATGATTACCACTATCGTCAACGTCTGCTCGACCCCCGTC
TCGTTCTACACAATTGAGAAGTTTGGCCGCCGTTCGCTCCTTTTGTGGGG
AGCACTTGGTATGGTCATCTGCCAGTTCATTGTCGCTATCGTCGGCACCG
TGGACGGTAGCAATAAGCACGCTGTCAGTGCAGAGATTTCTTTCATCTGC
ATTTACATCTTCTTCTTTGCTAGCACGTGGGGCCCGGGCGCCTGGGTTGT
GATTGGCGAGATTTTCCCCCTACCTATTCGGTCGCGTGGTGTGGCTCTGT
CGACGGCATCGAACTGGCTGTGGAATTGCGTGGACCGGTGTCAACTTTGT
CTTCTACTTTGGAACGACCTTTTTCCAGTCGGACTATAACACTACCCCCA
CCGATTCCTTCGTCCTCCCGTCCTGGAAAAAATCGTTGATCACGTCGATC
CTCTCGGCTGGAACCTTCTTTGGTGCCCTCATTGCTGGTGACTTGGCAGA
CTGGTTCGGTCGTCGCACTACCATTGTCAGTGGTTGTGTTGTCTTCATCG
TTGGTGTTATCCTGCAGACCGCTTCGACCTCCTTGGGTCTGCTTGTTGCC
GGCCGTCTGGTCGCGGGATTTGGTGTGGGCTTCGTCTCCGCCATCATTAT
CCTGTACATGTCTGAGATTGCACCTCGCAAGGTTCGCGGTGCTATTGTCT
CAGGGTACCAGTTCTGCATCACCATCGGGCTCATGTTGGCCTCGTGCGTC
GACTACGGCACTGAGAACCGTCTCGACTCTGGCTCCTACCGTATCCCAAT
CGGCCTCCAGCTCGCCTGGGCCTTGATCCTGGGAGGTGGTCTGCTCTGCC
TGCCCGAGTCCCCTCGTTACTTTGTTAAAAAGGGCGACCTGGCTAAGGCT
GCGGAGGTTCTTGCCCGCGTTCGTGGTCAACCCCAAGACTCGGATTATAT
CAAGGATGAGCTGGCGGAGATTGTGGCAAATCATGAGTACGAGATGCAGG
TGATTCCGGAAGGTGGATATTTCGTCAGCTGGATGAACTGCTTCCGTGGC
AGTATATTCTCGCCCAACAGCAATCTCCGTCGGACTGTCCTAGGTACTTC
TCTGCAGATGATGCAACAATGGCTGAAGGCTTCGTTGACGCCTCGCGCGT
CGAGGCCCCAGTCACCCTCAAGACCTACTTGATGTGTGCCTTTGCGGCTT
TTGGTGGTATCTTCTTCGGTTATGACTCTGGTTATATCAGCGGTGTCATG
GGAATGAGATACTTCATCGAGGAGTTTGAGGGCTTGATCATCGCTGTCAT
CACCCCTTACATGGTCGACAAGGACAAGGGTGACTTGAAGGCCAAGGTGT
TCTTCATCTGGGGCTCGCTGTGTGCCTGCGCTTTTGTCTACACGTACTTC
CTAATTCCGGAGACCAAGGGTCTTACTCTTGAGCAGGTGGACAAGATGAT
GGAAGAGACCACGCCTCGCACCTCAGCTAAGTGGACTCCACATGGCACCT
TCACGGCCGAGATGGGTCTTACTGCGAATGCCGTGGCCGAAAAGGCTACT
GCGGTTCACCAGGAGGTGTGACTGGGAACCATCGATGACCCCTTCCTCAT
CAGCATGATTACCACTATCGTCAACGTCTGCTCGACCCCCGTCTCGTTCT
ACACAATTGAGAAGTTTGGCCGCCGTTCGCTCCTTTTGTGGGGAGCACTT
GGTATGGTCATCTGCCAGTTCATTGTCGCTATCGTCGGCACCGTGGACGG
TAGCAATAAGCACGCTGTCAGTGCAGAGATTTCTTTCATCTGCATTTACA
TCTTCTTCTTTGCTAGCACGTGGGGCCCGGGCGCCTGGGTTGTGATTGGC
GAGATTTTCCCCCTACCTATTCGGTCGCGTGGTGTGGCTCTGTCGACGGC
ATCGAACTGGCTGTGGAATTGCGTGGACCGGTGTCAACTTTGTCTTCTAC
TTTGGAACGACCTTTTTCCAGTCGGACTATAACACTACCCCCACCGATTC
CTTCGTCCTCCCGTCCTGGAAAAAATCGTTGATCACGTCGATCCTCTCGG
CTGGAACCTTCTTTGGTGCCCTCATTGCTGGTGACTTGGCAGACTGGTTC
GGTCGTCGCACTACCATTGTCAGTGGTTGTGTTGTCTTCATCGTTGGTGT
TATCCTGCAGACCGCTTCGACCTCCTTGGGTCTGCTTGTTGCCGGCCGTC
TGGTCGCGGGATTTGGTGTGGGCTTCGTCTCCGCCATCATTATCCTGTAC
ATGTCTGAGATTGCACCTCGCAAGGTTCGCGGTGCTATTGTCTCAGGGTA
CCAGTTCTGCATCACCATCGGGCTCATGTTGGCCTCGTGCGTCGACTACG
GCACTGAGAACCGTCTCGACTCTGGCTCCTACCGTATCCCAATCGGCCTC
CAGCTCGCCTGGGCCTTGATCCTGGGAGGTGGTCTGCTCTGCCTGCCCGA
GTCCCCTCGTTACTTTGTTAAAAAGGGCGACCTGGCTAAGGCTGCGGAGG
TTCTTGCCCGCGTTCGTGGTCAACCCCAAGACTCGGATTATATCAAGGAT
GAGCTGGCGGAGATTGTGGCAAATCATGAGTACGAGATGCAGGTGATTCC
GGAAGGTGGATATTTCGTCAGCTGGATGAACTGCTTCCGTGGCAGTATAT
TCTCGCCCAACAGCAATCTCCGTCGGACTGTCCTAGGTACTTCTCTGCAG
ATGATGCAACAATGGCTGAAGGCTTCGTTGACGCCTCGCGCGTCGAGGCC
CCAGTCACCCTCAAGACCTACTTGATGTGTGCCTTTGCGGCTTTTGGTGG
TATCTTCTTCGGTTATGACTCTGGTTATATCAGCGGTGTCATGGGAATGA
GATACTTCATCGAGGAGTTTGAGGGCTTGATCATCGCTGTCATCACCCCT
TACATGGTCGACAAGGACAAGGGTGACTTGAAGGCCAAGGTGTTCTTCAT
CTGGGGCTCGCTGTGTGCCTGCGCTTTTGTCTACACGTACTTCCTAATTC
CGGAGACCAAGGGTCTTACTCTTGAGCAGGTGGACAAGATGATGGAAGAG
ACCACGCCTCGCACCTCAGCTAAGTGGACTCCACATGGCACCTTCACGGC
CGAGATGGGTCTTACTGCGAATGCCGTGGCCGAAAAGGCTACTGCGGTTC
ACCAGGAGGTGTGACTGGGAACCATCGATGACCCCTTCCTCATCAGCATG
ATTACCACTATCGTCAACGTCTGCTCGACCCCCGTCTCGTTCTACACAAT
TGAGAAGTTTGGCCGCCGTTCGCTCCTTTTGTGGGGAGCACTTGGTATGG
TCATCTGCCAGTTCATTGTCGCTATCGTCGGCACCGTGGACGGTAGCAAT
AAGCACGCTGTCAGTGCAGAGATTTCTTTCATCTGCATTTACATCTTCTT
CTTTGCTAGCACGTGGGGCCCGGGCGCCTGGGTTGTGATTGGCGAGATTT
TCCCCCTACCTATTCGGTCGCGTGGTGTGGCTCTGTCGACGGCATCGAAC
TGGCTGTGGAATTGCGTGGACCGGTGTCAACTTTGTCTTCTACTTTGGAA
CGACCTTTTTCCAGTCGGACTATAACACTACCCCCACCGATTCCTTCGTC
CTCCCGTCCTGGAAAAAATCGTTGATCACGTCGATCCTCTCGGCTGGAAC
CTTCTTTGGTGCCCTCATTGCTGGTGACTTGGCAGACTGGTTCGGTCGTC
GCACTACCATTGTCAGTGGTTGTGTTGTCTTCATCGTTGGTGTTATCCTG
CAGACCGCTTCGACCTCCTTGGGTCTGCTTGTTGCCGGCCGTCTGGTCGC
GGGATTTGGTGTGGGCTTCGTCTCCGCCATCATTATCCTGTACATGTCTG
AGATTGCACCTCGCAAGGTTCGCGGTGCTATTGTCTCAGGGTACCAGTTC
TGCATCACCATCGGGCTCATGTTGGCCTCGTGCGTCGACTACGGCACTGA
GAACCGTCTCGACTCTGGCTCCTACCGTATCCCAATCGGCCTCCAGCTCG
CCTGGGCCTTGATCCTGGGAGGTGGTCTGCTCTGCCTGCCCGAGTCCCCT
CGTTACTTTGTTAAAAAGGGCGACCTGGCTAAGGCTGCGGAGGTTCTTGC
CCGCGTTCGTGGTCAACCCCAAGACTCGGATTATATCAAGGATGAGCTGG
CGGAGATTGTGGCAAATCATGAGTACGAGATGCAGGTGATTCCGGAAGGT
GGATATTTCGTCAGCTGGATGAACTGCTTCCGTGGCAGTATATTCTCGCC
CAACAGCAATCTCCGTCGGACTGTCCTAGGTACTTCTCTGCAGATGATGC
AACAATGGCTGAAGGCTTCGTTGACGCCTCGCGCGTCGAGGCCCCAGTCA
CCCTCAAGACCTACTTGATGTGTGCCTTTGCGGCTTTTGGTGGTATCTTC
TTCGGTTATGACTCTGGTTATATCAGCGGTGTCATGGGAATGAGATACTT
CATCGAGGAGTTTGAGGGCTTGATCATCGCTGTCATCACCCCTTACATGG
TCGACAAGGACAAGGGTGACTTGAAGGCCAAGGTGTTCTTCATCTGGGGC
TCGCTGTGTGCCTGCGCTTTTGTCTACACGTACTTCCTAATTCCGGAGAC
CAAGGGTCTTACTCTTGAGCAGGTGGACAAGATGATGGAAGAGACCACGC
CTCGCACCTCAGCTAAGTGGACTCCACATGGCACCTTCACGGCCGAGATG
GGTCTTACTGCGAATGCCGTGGCCGAAAAGGCTACTGCGGTTCACCAGGA
GGTGTGACTGGGAACCATCGATGACCCCTTCCTCATCAGCATGATTACCA
CTATCGTCAACGTCTGCTCGACCCCCGTCTCGTTCTACACAATTGAGAAG
TTTGGCCGCCGTTCGCTCCTTTTGTGGGGAGCACTTGGTATGGTCATCTG
CCAGTTCATTGTCGCTATCGTCGGCACCGTGGACGGTAGCAATAAGCACG
CTGTCAGTGCAGAGATTTCTTTCATCTGCATTTACATCTTCTTCTTTGCT
AGCACGTGGGGCCCGGGCGCCTGGGTTGTGATTGGCGAGATTTTCCCCCT
ACCTATTCGGTCGCGTGGTGTGGCTCTGTCGACGGCATCGAACTGGCTGT
GGAATTGCGTGGACCGGTGTCAACTTTGTCTTCTACTTTGGAACGACCTT
TTTCCAGTCGGACTATAACACTACCCCCACCGATTCCTTCGTCCTCCCGT
CCTGGAAAAAATCGTTGATCACGTCGATCCTCTCGGCTGGAACCTTCTTT
GGTGCCCTCATTGCTGGTGACTTGGCAGACTGGTTCGGTCGTCGCACTAC
CATTGTCAGTGGTTGTGTTGTCTTCATCGTTGGTGTTATCCTGCAGACCG
CTTCGACCTCCTTGGGTCTGCTTGTTGCCGGCCGTCTGGTCGCGGGATTT
GGTGTGGGCTTCGTCTCCGCCATCATTATCCTGTACATGTCTGAGATTGC
ACCTCGCAAGGTTCGCGGTGCTATTGTCTCAGGGTACCAGTTCTGCATCA
CCATCGGGCTCATGTTGGCCTCGTGCGTCGACTACGGCACTGAGAACCGT
CTCGACTCTGGCTCCTACCGTATCCCAATCGGCCTCCAGCTCGCCTGGGC
CTTGATCCTGGGAGGTGGTCTGCTCTGCCTGCCCGAGTCCCCTCGTTACT
TTGTTAAAAAGGGCGACCTGGCTAAGGCTGCGGAGGTTCTTGCCCGCGTT
CGTGGTCAACCCCAAGACTCGGATTATATCAAGGATGAGCTGGCGGAGAT
TGTGGCAAATCATGAGTACGAGATGCAGGTGATTCCGGAAGGTGGATATT
TCGTCAGCTGGATGAACTGCTTCCGTGGCAGTATATTCTCGCCCAACAGC
AATCTCCGTCGGACTGTCCTAGGTACTTCTCTGCAGATGATGCAACAATG
GCTGAAGGCTTCGTTGACGCCTCGCGCGTCGAGGCCCCAGTCACCCTCAA
GACCTACTTGATGTGTGCCTTTGCGGCTTTTGGTGGTATCTTCTTCGGTT
ATGACTCTGGTTATATCAGCGGTGTCATGGGAATGAGATACTTCATCGAG
GAGTTTGAGGGCTTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| PFAM | PF07690 |
| InterPro | IPR036259 |
| PFAM | PF00083 |
| InterPro | IPR020846 |
| InterPro | IPR005828 |
| InterPro | IPR003663 |
| InterPro | IPR005829 |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000048 | supercontig | MCQH01000048:226258..228076 - |
|
