|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000048:510881..511660- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_002173-T1 ID=ATCC10864_002173-T1|Name=ATCC10864_002173-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=780bp|location=Sequence derived from alignment at MCQH01000048:510881..511660- (Aspergillus niger ATCC 10864)
ATGTCGACCGATCCCAAGATCCAGTAATTACCCCTCTTTTCCTACCCTCC
TTTACATCCCGATGAGTCATTAGCTCTTGTCATGGTGTAATCCGCTCCTC
AACCTGCCGGACCTCATTGCTAACCTTGTCTTGCAATTCATTAGGGACCT
GCTCAACAAGCCTAAGAGCGAGCTCACGTACGTTATCGAACCCCTCCTCT
TCTTTCCGGCTTTTATCAAAGCTTTCTATTCCCGTGTTCCTATCACATGA
TGCCCGATCCCCTTTGCACACCTATCAGTCCAACTACCCATGCCCACCAC
AACCCATGATATCCGGATAGTGTCCCGCGCGCCTAATTCTCATCGCGCCA
CATCATATCTATCTATCTACCAACCCATCATCGCCGTCCATTCGCTAACC
TGGCCCCTCATTCAGTGAATACGAGGTCTCCCTCGTCGAGGAACATGAGC
TCACTGCCGGTCCTTTGTCCCTTCTCCAAACCGCTACGCGCACACACACC
CAGGTCCTGATCTCATGCCGGAACAACCGCAAGCTCCTCGCCCGTGTCAA
GGCCTTCGACCGCCACTGCAACATGGTTCTGGAGAACGTCAAGGAGATGT
GGACCGAGAAGCCCAAGGGTGGTAACGGCAAGGGTGTTAACAAGGATCGC
TTCATCAGCAAGATGTAAGCATCGCCATTACCTACACTCACCCTTTCCCC
CCGCCAGAAACAATCCTAACCCAACCTTTTATCGTAGGTTCCTCCGTGGT
GACTCCGTCATCCTCGTCCTGCTCAGCTGA back to topCoding sequence (CDS) from alignment at MCQH01000048:510881..511660- >ATCC10864_002173-T1 ID=ATCC10864_002173-T1|Name=ATCC10864_002173-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1392bp|location=Sequence derived from alignment at MCQH01000048:510881..511660- (Aspergillus niger ATCC 10864)
GTTCCTCCGTGGTGACTCCGTCATCCTCGTCCTGCTCAGCTGATGAATAC
GAGGTCTCCCTCGTCGAGGAACATGAGCTCACTGCCGGTCCTTTGTCCCT
TCTCCAAACCGCTACGCGCACACACACCCAGGTCCTGATCTCATGCCGGA
ACAACCGCAAGCTCCTCGCCCGTGTCAAGGCCTTCGACCGCCACTGCAAC
ATGGTTCTGGAGAACGTCAAGGAGATGTGGACCGAGAAGCCCAAGGGTGG
TAACGGCAAGGGTGTTAACAAGGATCGCTTCATCAGCAAGATGGACCTGC
TCAACAAGCCTAAGAGCGAGCTCACATGTCGACCGATCCCAAGATCCAGT
TCCTCCGTGGTGACTCCGTCATCCTCGTCCTGCTCAGCTGATGAATACGA
GGTCTCCCTCGTCGAGGAACATGAGCTCACTGCCGGTCCTTTGTCCCTTC
TCCAAACCGCTACGCGCACACACACCCAGGTCCTGATCTCATGCCGGAAC
AACCGCAAGCTCCTCGCCCGTGTCAAGGCCTTCGACCGCCACTGCAACAT
GGTTCTGGAGAACGTCAAGGAGATGTGGACCGAGAAGCCCAAGGGTGGTA
ACGGCAAGGGTGTTAACAAGGATCGCTTCATCAGCAAGATGGACCTGCTC
AACAAGCCTAAGAGCGAGCTCACATGTCGACCGATCCCAAGATCCAGTTC
CTCCGTGGTGACTCCGTCATCCTCGTCCTGCTCAGCTGATGAATACGAGG
TCTCCCTCGTCGAGGAACATGAGCTCACTGCCGGTCCTTTGTCCCTTCTC
CAAACCGCTACGCGCACACACACCCAGGTCCTGATCTCATGCCGGAACAA
CCGCAAGCTCCTCGCCCGTGTCAAGGCCTTCGACCGCCACTGCAACATGG
TTCTGGAGAACGTCAAGGAGATGTGGACCGAGAAGCCCAAGGGTGGTAAC
GGCAAGGGTGTTAACAAGGATCGCTTCATCAGCAAGATGGACCTGCTCAA
CAAGCCTAAGAGCGAGCTCACATGTCGACCGATCCCAAGATCCAGTTCCT
CCGTGGTGACTCCGTCATCCTCGTCCTGCTCAGCTGATGAATACGAGGTC
TCCCTCGTCGAGGAACATGAGCTCACTGCCGGTCCTTTGTCCCTTCTCCA
AACCGCTACGCGCACACACACCCAGGTCCTGATCTCATGCCGGAACAACC
GCAAGCTCCTCGCCCGTGTCAAGGCCTTCGACCGCCACTGCAACATGGTT
CTGGAGAACGTCAAGGAGATGTGGACCGAGAAGCCCAAGGGTGGTAACGG
CAAGGGTGTTAACAAGGATCGCTTCATCAGCAAGATGGACCTGCTCAACA
AGCCTAAGAGCGAGCTCACATGTCGACCGATCCCAAGATCCA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008380 | RNA splicing |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0030532 | small nuclear ribonucleoprotein complex |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| PFAM | PF01423 |
| InterPro | IPR001163 |
| InterPro | IPR010920 |
| InterPro | IPR027248 |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265IT6 |
| Product | mRNA splicing protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000048 | supercontig | MCQH01000048:510881..511660 - |
|
