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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000048:537431..538837+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_002180-T1 ID=ATCC10864_002180-T1|Name=ATCC10864_002180-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1407bp|location=Sequence derived from alignment at MCQH01000048:537431..538837+ (Aspergillus niger ATCC 10864)
ATGGCGAAGGTCATTTTTACACCATGGAAGGAGCACTCGCAATTACTCGC
AGTGCGGAGTCAATTCTACCCTGCACCGTTTTATGATGGGCCCGACATGC
GCTCCAAGGCCTGCGCCACTGTATGCGAAAAGGCACCCTGAAATAATATA
GTTATCTTTACTTGACCCTAACATGAATTACAGGTCGCGGCTTGGAAGTT
ACGAGGAAATCTGCCACATCCAGTCGAGGCCACGGCCTTGCTAACGGATG
CTATCCTTCATGATGATGCCCTGAAAAATTCCATCTTTTCTATTCGGGCT
ACGTACTCGGCTGCGTTTTGTCGGTATGACTGTCTGCTTTGATTCATCGA
TTACATGATTACGCAACAAGTGTAACGATCACTAACGCCAGTTAGATTCG
TGACGGGGCTCGTCGACTCCAAGCTGAACGGGCAGCGTAAAACCATGTTC
CAACGAGCCATTGATCTGGGCCTACCGGCCTCATTTGTGGAACTGCGTCA
CGAGGCGACGCATCGTGAACTGCCTTCTCTAACAGTGCTGCGCAATGCCA
CGCAGCGGTCCCTTGAGTGGCTGTGGGACTACTACTGGGCCAAGACTGAT
CTGAGTGCTGATATGATGCCCGTGTCAGAGCCTGAGGCATTTGACGGTGC
TGAAGATGACGTCGAGCCCATCAAGGCGGCTTTAAGAACTGAATTCGAGC
ACTTACTGGCTGAAGAAGATTCGTCAGAACCGCCGCGGAAGAAGAGGAGG
TTCCAGCAGAACGTCTCGTCTACGTCTACGCATTTGGTCTCGATATGCAA
GTCTTCCAGTCGTGGGGCGTCTGCGCTAGCAGGCGTGATCGTGGAGGACT
CGGTGTTGGTTCCTGCTGGACGGAAGTGAGTTTTCTTGATATTCTGATCG
TGTATGAACATCTATAAGCTGACTTGGTACAGAATGGGTGATTCCATGAC
GGGCATGTTCGCTAAGTGGGATTCATTATTGCAGATGCTCGCGGAGGGCC
ATCCCCCGGTCCTGGCATCGCTGATGGAGGAGATGGTGAATGTACTCGCC
TTTTCAGGCTCAAAGAACGTGAAAAGCGACCCTCAGTTCGAAGGATTATA
CATGTGGCTGGACCATATACTTCAATCGCCGGAATGGGGGTCTCGAAGAC
GACTACTGTCCCACGCATATCTTCTTGCCGTTTGCGAGCAGAGTTCCAAC
CACTGGACGACGCTTCTTAAGGAAAGCTTACAGCAGAGGACGGACGATTT
AGCACCTAGCAAGCAGTCGTCCACGTCAAAGAAGCAGTCGAAGAAGGACG
GATCTGGTCTCAAGCGGACTGCAGATGCCGACGATTTGAAAGAGTTGAAG
AAATTCGGATGGGAGACGGTAGATACGTGGGATACGCGACCGTTAGGGAT
AGTATAG back to topCoding sequence (CDS) from alignment at MCQH01000048:537431..538837+ >ATCC10864_002180-T1 ID=ATCC10864_002180-T1|Name=ATCC10864_002180-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4860bp|location=Sequence derived from alignment at MCQH01000048:537431..538837+ (Aspergillus niger ATCC 10864)
ATGGCGAAGGTCATTTTTACACCATGGAAGGAGCACTCGCAATTACTCGC
AGTGCGGAGTCAATTCTACCCTGCACCGTTTTATGATGGGCCCGACATGC
GCTCCAAGGCCTGCGCCACTGTCGCGGCTTGGAAGTTACGAGGAAATCTG
CCACATCCAGTCGAGGCCACGGCCTTGCTAACGGATGCTATCCTTCATGA
TGATGCCCTGAAAAATTCCATCTTTTCTATTCGGGCTACGTACTCGGCTG
CGTTTTGTCGATTCGTGACGGGGCTCGTCGACTCCAAGCTGAACGGGCAG
CGTAAAACCATGTTCCAACGAGCCATTGATCTGGGCCTACCGGCCTCATT
TGTGGAACTGCGTCACGAGGCGACGCATCGTGAACTGCCTTCTCTAACAG
TGCTGCGCAATGCCACGCAGCGGTCCCTTGAGTGGCTGTGGGACTACTAC
TGGGCCAAGACTGATCTGAGTGCTGATATGATGCCCGTGTCAGAGCCTGA
GGCATTTGACGGTGCTGAAGATGACGTCGAGCCCATCAAGGCGGCTTTAA
GAACTGAATTCGAGCACTTACTGGCTGAAGAAGATTCGTCAGAACCGCCG
CGGAAGAAGAGGAGGTTCCAGCAGAACGTCTCGTCTACGTCTACGCATTT
GGTCTCGATATGCAAGTCTTCCAGTCGTGGGGCGTCTGCGCTAGCAGGCG
TGATCGTGGAGGACTCGGTGTTGGTTCCTGCTGGACGGAAAATGGGTGAT
TCCATGACGGGCATGTTCGCTAAGTGGGATTCATTATTGCAGATGCTCGC
GGAGGGCCATCCCCCGGTCCTGGCATCGCTGATGGAGGAGATGGTGAATG
TACTCGCCTTTTCAGGCTCAAAGAACGTGAAAAGCGACCCTCAGTTCGAA
GGATTATACATGTGGCTGGACCATATACTTCAATCGCCGGAATGGGGGTC
TCGAAGACGACTACTGTCCCACGCATATCTTCTTGCCGTTTGCGAGCAGA
GTTCCAACCACTGGACGACGCTTCTTAAGGAAAGCTTACAGCAGAGGACG
GACGATTTAGCACCTAGCAAGCAGTCGTCCACGTCAAAGAAGCAGTCGAA
GAAGGACGGATCTGGTCTCAAGCGGACTGCAGATGCCGACGATTTGAAAG
AGTTGAAGAAATTCGGATGGGAGACGGTAGATACGTGGGATACGCGACCG
TTAGGGATAGTATAGATGGCGAAGGTCATTTTTACACCATGGAAGGAGCA
CTCGCAATTACTCGCAGTGCGGAGTCAATTCTACCCTGCACCGTTTTATG
ATGGGCCCGACATGCGCTCCAAGGCCTGCGCCACTGTCGCGGCTTGGAAG
TTACGAGGAAATCTGCCACATCCAGTCGAGGCCACGGCCTTGCTAACGGA
TGCTATCCTTCATGATGATGCCCTGAAAAATTCCATCTTTTCTATTCGGG
CTACGTACTCGGCTGCGTTTTGTCGATTCGTGACGGGGCTCGTCGACTCC
AAGCTGAACGGGCAGCGTAAAACCATGTTCCAACGAGCCATTGATCTGGG
CCTACCGGCCTCATTTGTGGAACTGCGTCACGAGGCGACGCATCGTGAAC
TGCCTTCTCTAACAGTGCTGCGCAATGCCACGCAGCGGTCCCTTGAGTGG
CTGTGGGACTACTACTGGGCCAAGACTGATCTGAGTGCTGATATGATGCC
CGTGTCAGAGCCTGAGGCATTTGACGGTGCTGAAGATGACGTCGAGCCCA
TCAAGGCGGCTTTAAGAACTGAATTCGAGCACTTACTGGCTGAAGAAGAT
TCGTCAGAACCGCCGCGGAAGAAGAGGAGGTTCCAGCAGAACGTCTCGTC
TACGTCTACGCATTTGGTCTCGATATGCAAGTCTTCCAGTCGTGGGGCGT
CTGCGCTAGCAGGCGTGATCGTGGAGGACTCGGTGTTGGTTCCTGCTGGA
CGGAAAATGGGTGATTCCATGACGGGCATGTTCGCTAAGTGGGATTCATT
ATTGCAGATGCTCGCGGAGGGCCATCCCCCGGTCCTGGCATCGCTGATGG
AGGAGATGGTGAATGTACTCGCCTTTTCAGGCTCAAAGAACGTGAAAAGC
GACCCTCAGTTCGAAGGATTATACATGTGGCTGGACCATATACTTCAATC
GCCGGAATGGGGGTCTCGAAGACGACTACTGTCCCACGCATATCTTCTTG
CCGTTTGCGAGCAGAGTTCCAACCACTGGACGACGCTTCTTAAGGAAAGC
TTACAGCAGAGGACGGACGATTTAGCACCTAGCAAGCAGTCGTCCACGTC
AAAGAAGCAGTCGAAGAAGGACGGATCTGGTCTCAAGCGGACTGCAGATG
CCGACGATTTGAAAGAGTTGAAGAAATTCGGATGGGAGACGGTAGATACG
TGGGATACGCGACCGTTAGGGATAGTATAGATGGCGAAGGTCATTTTTAC
ACCATGGAAGGAGCACTCGCAATTACTCGCAGTGCGGAGTCAATTCTACC
CTGCACCGTTTTATGATGGGCCCGACATGCGCTCCAAGGCCTGCGCCACT
GTCGCGGCTTGGAAGTTACGAGGAAATCTGCCACATCCAGTCGAGGCCAC
GGCCTTGCTAACGGATGCTATCCTTCATGATGATGCCCTGAAAAATTCCA
TCTTTTCTATTCGGGCTACGTACTCGGCTGCGTTTTGTCGATTCGTGACG
GGGCTCGTCGACTCCAAGCTGAACGGGCAGCGTAAAACCATGTTCCAACG
AGCCATTGATCTGGGCCTACCGGCCTCATTTGTGGAACTGCGTCACGAGG
CGACGCATCGTGAACTGCCTTCTCTAACAGTGCTGCGCAATGCCACGCAG
CGGTCCCTTGAGTGGCTGTGGGACTACTACTGGGCCAAGACTGATCTGAG
TGCTGATATGATGCCCGTGTCAGAGCCTGAGGCATTTGACGGTGCTGAAG
ATGACGTCGAGCCCATCAAGGCGGCTTTAAGAACTGAATTCGAGCACTTA
CTGGCTGAAGAAGATTCGTCAGAACCGCCGCGGAAGAAGAGGAGGTTCCA
GCAGAACGTCTCGTCTACGTCTACGCATTTGGTCTCGATATGCAAGTCTT
CCAGTCGTGGGGCGTCTGCGCTAGCAGGCGTGATCGTGGAGGACTCGGTG
TTGGTTCCTGCTGGACGGAAAATGGGTGATTCCATGACGGGCATGTTCGC
TAAGTGGGATTCATTATTGCAGATGCTCGCGGAGGGCCATCCCCCGGTCC
TGGCATCGCTGATGGAGGAGATGGTGAATGTACTCGCCTTTTCAGGCTCA
AAGAACGTGAAAAGCGACCCTCAGTTCGAAGGATTATACATGTGGCTGGA
CCATATACTTCAATCGCCGGAATGGGGGTCTCGAAGACGACTACTGTCCC
ACGCATATCTTCTTGCCGTTTGCGAGCAGAGTTCCAACCACTGGACGACG
CTTCTTAAGGAAAGCTTACAGCAGAGGACGGACGATTTAGCACCTAGCAA
GCAGTCGTCCACGTCAAAGAAGCAGTCGAAGAAGGACGGATCTGGTCTCA
AGCGGACTGCAGATGCCGACGATTTGAAAGAGTTGAAGAAATTCGGATGG
GAGACGGTAGATACGTGGGATACGCGACCGTTAGGGATAGTATAGATGGC
GAAGGTCATTTTTACACCATGGAAGGAGCACTCGCAATTACTCGCAGTGC
GGAGTCAATTCTACCCTGCACCGTTTTATGATGGGCCCGACATGCGCTCC
AAGGCCTGCGCCACTGTCGCGGCTTGGAAGTTACGAGGAAATCTGCCACA
TCCAGTCGAGGCCACGGCCTTGCTAACGGATGCTATCCTTCATGATGATG
CCCTGAAAAATTCCATCTTTTCTATTCGGGCTACGTACTCGGCTGCGTTT
TGTCGATTCGTGACGGGGCTCGTCGACTCCAAGCTGAACGGGCAGCGTAA
AACCATGTTCCAACGAGCCATTGATCTGGGCCTACCGGCCTCATTTGTGG
AACTGCGTCACGAGGCGACGCATCGTGAACTGCCTTCTCTAACAGTGCTG
CGCAATGCCACGCAGCGGTCCCTTGAGTGGCTGTGGGACTACTACTGGGC
CAAGACTGATCTGAGTGCTGATATGATGCCCGTGTCAGAGCCTGAGGCAT
TTGACGGTGCTGAAGATGACGTCGAGCCCATCAAGGCGGCTTTAAGAACT
GAATTCGAGCACTTACTGGCTGAAGAAGATTCGTCAGAACCGCCGCGGAA
GAAGAGGAGGTTCCAGCAGAACGTCTCGTCTACGTCTACGCATTTGGTCT
CGATATGCAAGTCTTCCAGTCGTGGGGCGTCTGCGCTAGCAGGCGTGATC
GTGGAGGACTCGGTGTTGGTTCCTGCTGGACGGAAAATGGGTGATTCCAT
GACGGGCATGTTCGCTAAGTGGGATTCATTATTGCAGATGCTCGCGGAGG
GCCATCCCCCGGTCCTGGCATCGCTGATGGAGGAGATGGTGAATGTACTC
GCCTTTTCAGGCTCAAAGAACGTGAAAAGCGACCCTCAGTTCGAAGGATT
ATACATGTGGCTGGACCATATACTTCAATCGCCGGAATGGGGGTCTCGAA
GACGACTACTGTCCCACGCATATCTTCTTGCCGTTTGCGAGCAGAGTTCC
AACCACTGGACGACGCTTCTTAAGGAAAGCTTACAGCAGAGGACGGACGA
TTTAGCACCTAGCAAGCAGTCGTCCACGTCAAAGAAGCAGTCGAAGAAGG
ACGGATCTGGTCTCAAGCGGACTGCAGATGCCGACGATTTGAAAGAGTTG
AAGAAATTCGGATGGGAGACGGTAGATACGTGGGATACGCGACCGTTAGG
GATAGTATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006364 | rRNA processing |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004519 | endonuclease activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0090730 | Las1 complex |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000048 | supercontig | MCQH01000048:537431..538837 + |
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