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ATCC10864_002185-T1, ATCC10864_002185-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002185-T1
Unique NameATCC10864_002185-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000048:544684..545640+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002185-T1 ID=ATCC10864_002185-T1|Name=ATCC10864_002185-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=957bp|location=Sequence derived from alignment at MCQH01000048:544684..545640+ (Aspergillus niger ATCC 10864)
ATGCCTGGAAGTGACGCTCTTCGCGCACTCAAGTTGCTCTCTCGCAGCTC
CGGGGGTCTCCTCTCGGGCGCTGAGACGACCACGGTAAGACCGACGTTTT
TCGATTCCGCTGCTAGTCTTTTGCACATGGCCGAATGCAAGATACTGACC
ATTGATGCCTCGATCTTATAGCAACGATGCCTGGCGAAGACTTTCTCCCG
CTCGATGGCTACCGAGGCCCAGTCTCCCGTTGACAACCTCACGAGGGAGG
TTCCCAAGCCCGTGTGGAATCCCGAACCCGTCAAGGCGACACTCTACTCA
TTTCCCTCGATGGAGCCCCTGCGCTTCGTTGAGTATCCTCGCAACCACCT
CCTGATGCCGCTACGCAAAGACATCCTGCACCGAGCCGTCGTCTACGAGG
GTGACATGACCCGACAAGGTACCGCAAGCACCAAGTGGAGAGATGATGTG
CATGGAAGTGGCAGGAAGTTGCATGCGCAGAAGGGTACTGGCCGGGCCCG
TGTTGGCGACAAGAAATCCCCGATCCGGAGAGGTGGAGGTGTTGCTTTTG
GCCCTCATCCCCGCGACTTCTCTACGGAGCTCCCTCAGAAAATCTACGAC
CAGGCGTGGCGGATAGCCCTCAGTTACCGCTACAAGCGCGGCCAATTGAT
CATTGTCGACAACGAAATCGCCCTTCCGGAAGGTGCCACTCCCCATATTG
TTGAGGAGATTTTCAAGGTCAACTGCTGGGGCCGGCACTATGGACGGTCA
ACATTGATCACGGACCAGCCGAACGAGGAGCTGTTCGAGACGGTGCGTCA
GGCTGGCGAACACGCGAAGATCCTGGACCGCCGTGACGTGGATGTGAAGG
ACCTGTTGGAGACTGGACGCTTGATCATCGAGAAGCAGGCGCTGGACCGC
ATTCTGTCTCAGCATTCCAAGGATCTGAAGAACAAGCCGGCCAAGGCTTT
GTACTAA
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Coding sequence (CDS) from alignment at MCQH01000048:544684..545640+

>ATCC10864_002185-T1 ID=ATCC10864_002185-T1|Name=ATCC10864_002185-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1740bp|location=Sequence derived from alignment at MCQH01000048:544684..545640+ (Aspergillus niger ATCC 10864)
ATGCCTGGAAGTGACGCTCTTCGCGCACTCAAGTTGCTCTCTCGCAGCTC
CGGGGGTCTCCTCTCGGGCGCTGAGACGACCACGCAACGATGCCTGGCGA
AGACTTTCTCCCGCTCGATGGCTACCGAGGCCCAGTCTCCCGTTGACAAC
CTCACGAGGGAGGTTCCCAAGCCCGTGTGGAATCCCGAACCCGTCAAGGC
GACACTCTACTCATTTCCCTCGATGGAGCCCCTGCGCTTCGTTGAGTATC
CTCGCAACCACCTCCTGATGCCGCTACGCAAAGACATCCTGCACCGAGCC
GTCGTCTACGAGGGTGACATGACCCGACAAGGTACCGCAAGCACCAAGTG
GAGAGATGATGTGCATGGAAGTGGCAGGAAGTTGCATGCGCAGAAGGGTA
CTGGCCGGGCCCGTGTTGGCGACAAGAAATCCCCGATCCGGAGAGGTGGA
GGTGTTGCTTTTGGCCCTCATCCCCGCGACTTCTCTACGGAGCTCCCTCA
GAAAATCTACGACCAGGCGTGGCGGATAGCCCTCAGTTACCGCTACAAGC
GCGGCCAATTGATCATTGTCGACAACGAAATCGCCCTTCCGGAAGGTGCC
ACTCCCCATATTGTTGAGGAGATTTTCAAGGTCAACTGCTGGGGCCGGCA
CTATGGACGGTCAACATTGATCACGGACCAGCCGAACGAGGAGCTGTTCG
AGACGGTGCGTCAGGCTGGCGAACACGCGAAGATCCTGGACCGCCGTGAC
GTGGATGTGAAGGACCTGTTGGAGACTGGACGCTTGATCATCGAGAAGCA
GGCGCTGGACCGCATTCTGTCTCAGCATTCCAAGGATCTGAAGAACAAGC
CGGCCAAGGCTTTGTACTAAATGCCTGGAAGTGACGCTCTTCGCGCACTC
AAGTTGCTCTCTCGCAGCTCCGGGGGTCTCCTCTCGGGCGCTGAGACGAC
CACGCAACGATGCCTGGCGAAGACTTTCTCCCGCTCGATGGCTACCGAGG
CCCAGTCTCCCGTTGACAACCTCACGAGGGAGGTTCCCAAGCCCGTGTGG
AATCCCGAACCCGTCAAGGCGACACTCTACTCATTTCCCTCGATGGAGCC
CCTGCGCTTCGTTGAGTATCCTCGCAACCACCTCCTGATGCCGCTACGCA
AAGACATCCTGCACCGAGCCGTCGTCTACGAGGGTGACATGACCCGACAA
GGTACCGCAAGCACCAAGTGGAGAGATGATGTGCATGGAAGTGGCAGGAA
GTTGCATGCGCAGAAGGGTACTGGCCGGGCCCGTGTTGGCGACAAGAAAT
CCCCGATCCGGAGAGGTGGAGGTGTTGCTTTTGGCCCTCATCCCCGCGAC
TTCTCTACGGAGCTCCCTCAGAAAATCTACGACCAGGCGTGGCGGATAGC
CCTCAGTTACCGCTACAAGCGCGGCCAATTGATCATTGTCGACAACGAAA
TCGCCCTTCCGGAAGGTGCCACTCCCCATATTGTTGAGGAGATTTTCAAG
GTCAACTGCTGGGGCCGGCACTATGGACGGTCAACATTGATCACGGACCA
GCCGAACGAGGAGCTGTTCGAGACGGTGCGTCAGGCTGGCGAACACGCGA
AGATCCTGGACCGCCGTGACGTGGATGTGAAGGACCTGTTGGAGACTGGA
CGCTTGATCATCGAGAAGCAGGCGCTGGACCGCATTCTGTCTCAGCATTC
CAAGGATCTGAAGAACAAGCCGGCCAAGGCTTTGTACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002185ATCC10864_002185Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002185-T1.exon1ATCC10864_002185-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_002185-T1.exon2ATCC10864_002185-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002185-T1.cdsATCC10864_002185-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002185-T1ATCC10864_002185-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR023574
InterProIPR013005
PFAMPF00573
InterProIPR002136
Properties
Property NameValue
NoteBUSCO:EOG09264NNY
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000048supercontigMCQH01000048:544684..545640 +
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