|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000048:619675..620884- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_002212-T1 ID=ATCC10864_002212-T1|Name=ATCC10864_002212-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1210bp|location=Sequence derived from alignment at MCQH01000048:619675..620884- (Aspergillus niger ATCC 10864)
ATGATCTCCCCGAAAGCGGAGCGTTTTCATCTCGCTTTCCCAGTCCCTCA
ATCTACTTCTACGGTTGCTGCACTTCTGCCCGCTACGCACTCTACAACGC
TGTCTCGATTTCCAACCAGCCTCGCCATGGATACAGCCATTGATCTGTCC
GATGCCTCCAAGGCCTTGGACCTCGCCAACATCCGCTTCCAGTTAATGTA
AGTGTCTTCCGAGGGATTTCAGTAGTTAGTTAGCCTACTCCAGATCGACC
GAAGATCGGGGAACCAACTCGCATACAATAATTCATATCCCTGCGCGCAA
AGTTCAACCCCGCATCCCCCTCCATTACTGCCAGGGATATAACATCAATG
TCTACCAACACAAACACCTAAAATCAAGCAAAAAAACAACATGTCAGTAA
CTAATCATGCATCGATACAATTAGCCGTCTCGAAGACACCATCACCTTCC
ATCTCATTGAACGGGCGCAATTCCCCCTCAACAAGCCCATCTACCTATCC
GGCGGGGTAAAAATCCCTGGCACCGACCTCAGTCTCCTCGACTACTTCCT
CCGCGAACAAGAACGTCTGGAGTCGCGTGTTCGTCGGTACCAGTCTCCCG
ATGAATACCCCTTCTTCCCGGACTCGCTGGAAGAGCCCATCCTTGCCCCG
ATCAAGTACCCCAAGATCCTGCATGACAACGACGTCAACGTCAATAGCAC
CTTGAAACAGCGCTACATCGAGGATATCCTCCCCGCTGTGTGCGCGCAGT
TCGGGCGCGAAGATCGCGGCGAGGCGCAGGAGAACTATGGATCCGCAGCC
ACATGCGATGTGCACTGCTTGCAGGCCCTGTCGAGGAGAATCCACTTCGG
AAAGTTTGTCGCGGAGGCAAAGTTCCAGCAGGAGACCGAGCGCTTTGTTA
AGCTGATCAAGGCGAATGATCGGAAGGGCATTGATGACGCTATTACCAAG
CCTGAGGTGGAGCTGAAGGTGTTGGAGCGGTTGGCGCTCAAGGCGAAGAC
GTATGGTACCGATCCGGGTTTCCAACCTGAAAATGGACCTAAGATTAATG
TTGATGCTGTTGTGGCCATGTACAAGGTGAGTTTACATCCTCCCCGCAGT
TGATAGAATCAGGATCGTGCTGACGTGTGTAGGAATATGTCATCCCGCTC
ACCAAGGTCGTCGAGGTTGACTACCTCATGCAGCGACTCAAGGGCACCCA
ATGGGAGTAG back to topCoding sequence (CDS) from alignment at MCQH01000048:619675..620884- >ATCC10864_002212-T1 ID=ATCC10864_002212-T1|Name=ATCC10864_002212-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2781bp|location=Sequence derived from alignment at MCQH01000048:619675..620884- (Aspergillus niger ATCC 10864)
GAATATGTCATCCCGCTCACCAAGGTCGTCGAGGTTGACTACCTCATGCA
GCGACTCAAGGGCACCCAATGGGAGTAGCCGTCTCGAAGACACCATCACC
TTCCATCTCATTGAACGGGCGCAATTCCCCCTCAACAAGCCCATCTACCT
ATCCGGCGGGGTAAAAATCCCTGGCACCGACCTCAGTCTCCTCGACTACT
TCCTCCGCGAACAAGAACGTCTGGAGTCGCGTGTTCGTCGGTACCAGTCT
CCCGATGAATACCCCTTCTTCCCGGACTCGCTGGAAGAGCCCATCCTTGC
CCCGATCAAGTACCCCAAGATCCTGCATGACAACGACGTCAACGTCAATA
GCACCTTGAAACAGCGCTACATCGAGGATATCCTCCCCGCTGTGTGCGCG
CAGTTCGGGCGCGAAGATCGCGGCGAGGCGCAGGAGAACTATGGATCCGC
AGCCACATGCGATGTGCACTGCTTGCAGGCCCTGTCGAGGAGAATCCACT
TCGGAAAGTTTGTCGCGGAGGCAAAGTTCCAGCAGGAGACCGAGCGCTTT
GTTAAGCTGATCAAGGCGAATGATCGGAAGGGCATTGATGACGCTATTAC
CAAGCCTGAGGTGGAGCTGAAGGTGTTGGAGCGGTTGGCGCTCAAGGCGA
AGACGTATGGTACCGATCCGGGTTTCCAACCTGAAAATGGACCTAAGATT
AATGTTGATGCTGTTGTGGCCATGTACAAGATGATCTCCCCGAAAGCGGA
GCGTTTTCATCTCGCTTTCCCAGTCCCTCAATCTACTTCTACGGTTGCTG
CACTTCTGCCCGCTACGCACTCTACAACGCTGTCTCGATTTCCAACCAGC
CTCGCCATGGATACAGCCATTGATCTGTCCGATGCCTCCAAGGCCTTGGA
CCTCGCCAACATCCGCTTCCAGTTAATGAATATGTCATCCCGCTCACCAA
GGTCGTCGAGGTTGACTACCTCATGCAGCGACTCAAGGGCACCCAATGGG
AGTAGCCGTCTCGAAGACACCATCACCTTCCATCTCATTGAACGGGCGCA
ATTCCCCCTCAACAAGCCCATCTACCTATCCGGCGGGGTAAAAATCCCTG
GCACCGACCTCAGTCTCCTCGACTACTTCCTCCGCGAACAAGAACGTCTG
GAGTCGCGTGTTCGTCGGTACCAGTCTCCCGATGAATACCCCTTCTTCCC
GGACTCGCTGGAAGAGCCCATCCTTGCCCCGATCAAGTACCCCAAGATCC
TGCATGACAACGACGTCAACGTCAATAGCACCTTGAAACAGCGCTACATC
GAGGATATCCTCCCCGCTGTGTGCGCGCAGTTCGGGCGCGAAGATCGCGG
CGAGGCGCAGGAGAACTATGGATCCGCAGCCACATGCGATGTGCACTGCT
TGCAGGCCCTGTCGAGGAGAATCCACTTCGGAAAGTTTGTCGCGGAGGCA
AAGTTCCAGCAGGAGACCGAGCGCTTTGTTAAGCTGATCAAGGCGAATGA
TCGGAAGGGCATTGATGACGCTATTACCAAGCCTGAGGTGGAGCTGAAGG
TGTTGGAGCGGTTGGCGCTCAAGGCGAAGACGTATGGTACCGATCCGGGT
TTCCAACCTGAAAATGGACCTAAGATTAATGTTGATGCTGTTGTGGCCAT
GTACAAGATGATCTCCCCGAAAGCGGAGCGTTTTCATCTCGCTTTCCCAG
TCCCTCAATCTACTTCTACGGTTGCTGCACTTCTGCCCGCTACGCACTCT
ACAACGCTGTCTCGATTTCCAACCAGCCTCGCCATGGATACAGCCATTGA
TCTGTCCGATGCCTCCAAGGCCTTGGACCTCGCCAACATCCGCTTCCAGT
TAATGAATATGTCATCCCGCTCACCAAGGTCGTCGAGGTTGACTACCTCA
TGCAGCGACTCAAGGGCACCCAATGGGAGTAGCCGTCTCGAAGACACCAT
CACCTTCCATCTCATTGAACGGGCGCAATTCCCCCTCAACAAGCCCATCT
ACCTATCCGGCGGGGTAAAAATCCCTGGCACCGACCTCAGTCTCCTCGAC
TACTTCCTCCGCGAACAAGAACGTCTGGAGTCGCGTGTTCGTCGGTACCA
GTCTCCCGATGAATACCCCTTCTTCCCGGACTCGCTGGAAGAGCCCATCC
TTGCCCCGATCAAGTACCCCAAGATCCTGCATGACAACGACGTCAACGTC
AATAGCACCTTGAAACAGCGCTACATCGAGGATATCCTCCCCGCTGTGTG
CGCGCAGTTCGGGCGCGAAGATCGCGGCGAGGCGCAGGAGAACTATGGAT
CCGCAGCCACATGCGATGTGCACTGCTTGCAGGCCCTGTCGAGGAGAATC
CACTTCGGAAAGTTTGTCGCGGAGGCAAAGTTCCAGCAGGAGACCGAGCG
CTTTGTTAAGCTGATCAAGGCGAATGATCGGAAGGGCATTGATGACGCTA
TTACCAAGCCTGAGGTGGAGCTGAAGGTGTTGGAGCGGTTGGCGCTCAAG
GCGAAGACGTATGGTACCGATCCGGGTTTCCAACCTGAAAATGGACCTAA
GATTAATGTTGATGCTGTTGTGGCCATGTACAAGATGATCTCCCCGAAAG
CGGAGCGTTTTCATCTCGCTTTCCCAGTCCCTCAATCTACTTCTACGGTT
GCTGCACTTCTGCCCGCTACGCACTCTACAACGCTGTCTCGATTTCCAAC
CAGCCTCGCCATGGATACAGCCATTGATCTGTCCGATGCCTCCAAGGCCT
TGGACCTCGCCAACATCCGCTTCCAGTTAAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0046417 | chorismate metabolic process |
| GO:0009073 | aromatic amino acid family biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004106 | chorismate mutase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR037039 |
| InterPro | IPR008238 |
| InterPro | IPR036263 |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264719 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000048 | supercontig | MCQH01000048:619675..620884 - |
|
