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ATCC10864_002221-T1, ATCC10864_002221-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002221-T1
Unique NameATCC10864_002221-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000048:650943..652903+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002221-T1 ID=ATCC10864_002221-T1|Name=ATCC10864_002221-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1961bp|location=Sequence derived from alignment at MCQH01000048:650943..652903+ (Aspergillus niger ATCC 10864)
ATGCCAGAGGTCATCGATCTCCTCTCCTCCACCCCTCCGCCCCCGTTAGA
GCGACGTGAGCAGCTCTCCATCCGCAGAGCGCATTCTCACCCGCCTGTCG
TACCCGCCTCGGACTCCATCTTCTCCGACGAAATTGACCTCTCCGCATTT
ACCTACGATAACCCCATCGAGCAGCCCGCCAAACGACGGCGCTTGAGCCA
TGAGATCACACCCGTCAAAGATGTACCGCTTCCACCAGCTAAGAACTCGC
TGTTCCTCTTCTCCGATGACGACATAATCTTATCCTCGGACGGTCCCGCC
CCTACAAAACCTCCGGCCTGGAATGGAGAATCCGACCCTATTGTCTTCAC
CTCATCGGCGCCTGAACCCACTCATAATCTACCGGTCAGACCAGCCATAA
GCTCGCGTGCTGTAAACACTATCTCACTCGATGATGATGATGCTGGCAAT
TCCAGTGACACCCGCAGTAACAACCGACCCCGGAAAGAGGCGATTCAAGT
GTCCAGCGACCAATTGGATTTCCCGGATGTCGACGATTTACTTGATGTGG
CCCAGCGAGTCGAAGCAAACGCATTTTCAAGTCGGACTGCGAATCTACTA
GCAACCCTTGAAGACCGTTCCCGTGGCAGCAATGGCGAATCTGCGTCCAG
GTCGTCGAGAGGTCGGAGGATCCAGGATCAAAGCGATGATATAGAGGTTG
AAGAGATGCCGCCACCGCGGAAGCCCCAGCGCAAAGCAATCAAGGTTACA
AGCGAAGAGAAGGAGGCTAAAGCCAGAGAGCGGGAGGCGGCTAAGGCACA
AAGGGAACACGACAGGCAACTTGAAAAGGAGCGCAAGCAGAAAGCCAAGG
AAGATAAAGCCCGCGAAAAGCAACTCGCAGCGGACATTGCTGAGGTCAAC
AAGCTCAAGGTGGACAAGAAGGATTCGACGCATGAGATGCTAATTGACCT
CGCCTCTACATTTACCGACACAAGTCTCGGGAATCAGACCTCGGAGCTTA
TGCGCCTTCTCAAAGTTGATCTCTCATTTTTCCCCAGTACCATTCCGAAT
ATCGTCAAGTGGCGTCGCAAGGTTCGGGCTACATATAACGACTCCCTTGG
TCACTGGGAACCGTGCGCGCTTCACATCCGCGACGAAGAGGAGCATGTCC
TATGTTTGATAGCGGCTCAAGACTTTATCAATATGATCGTGGCCCCAACA
ACCGAACCAAGAAATACTATCAACGACCACGTTGAGCGCCTGAAATTAGC
CTACCCAAAGTCTCGACCGATCTATTTAATCGAAGGCTTGACAAGTCTAA
TGCGGAAGAATAACAATGCACAAAACAGAGCCTACCAAGCCGCTGTGCGA
CGACAATATGAAGACAGCTCTGCCCGTCCCTCAACGCGGAGAAAGCAACA
GCAGCCTGAACCGGTTACGCCTATAGACAGCGACACGGTTGAAGACGCTC
TCCTCGATTTACAGGTGACCCATTCGTGCCTAATCCATCATACAAGCTCC
CCTGCAGAGTCCGCGGAATGGATCAAGAACTTCACTGAGTATATTTCCAC
TGTGCCCTATCGCCGGGAGCGGATGGACTTGAATGACTCCGCATTTTGTA
TGGATGTAGGACAAGTAAAGCCCGGCGAGAACCGATCCGACGCATTCGTG
AAGATGCTCCAGGAGGTGAACCGAGTCACGGCGTCAATGGCATATGGCAT
TGCGACGCAATACCCAAGTGCGATGGATTTGGTAAATGCGATGCGGAAAC
ATGGACCGGGGCTATTAGAAGACGTCAAGGTATATTCCTTTACGGCTCCT
CGCCTTATTCGATTATATCTTTGTCTTGGTACTGACCATTATACTTTCAG
AAATCAGCAAACAAAAACGGCGCCCTCACCGATTCACGCATTGGTCCAGC
CGTGAGCAGACGATTGTATAAAGTATTCATGGGAATGGATCCGACGTCGA
CTGATATTTGA
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Coding sequence (CDS) from alignment at MCQH01000048:650943..652903+

>ATCC10864_002221-T1 ID=ATCC10864_002221-T1|Name=ATCC10864_002221-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3780bp|location=Sequence derived from alignment at MCQH01000048:650943..652903+ (Aspergillus niger ATCC 10864)
ATGCCAGAGGTCATCGATCTCCTCTCCTCCACCCCTCCGCCCCCGTTAGA
GCGACGTGAGCAGCTCTCCATCCGCAGAGCGCATTCTCACCCGCCTGTCG
TACCCGCCTCGGACTCCATCTTCTCCGACGAAATTGACCTCTCCGCATTT
ACCTACGATAACCCCATCGAGCAGCCCGCCAAACGACGGCGCTTGAGCCA
TGAGATCACACCCGTCAAAGATGTACCGCTTCCACCAGCTAAGAACTCGC
TGTTCCTCTTCTCCGATGACGACATAATCTTATCCTCGGACGGTCCCGCC
CCTACAAAACCTCCGGCCTGGAATGGAGAATCCGACCCTATTGTCTTCAC
CTCATCGGCGCCTGAACCCACTCATAATCTACCGGTCAGACCAGCCATAA
GCTCGCGTGCTGTAAACACTATCTCACTCGATGATGATGATGCTGGCAAT
TCCAGTGACACCCGCAGTAACAACCGACCCCGGAAAGAGGCGATTCAAGT
GTCCAGCGACCAATTGGATTTCCCGGATGTCGACGATTTACTTGATGTGG
CCCAGCGAGTCGAAGCAAACGCATTTTCAAGTCGGACTGCGAATCTACTA
GCAACCCTTGAAGACCGTTCCCGTGGCAGCAATGGCGAATCTGCGTCCAG
GTCGTCGAGAGGTCGGAGGATCCAGGATCAAAGCGATGATATAGAGGTTG
AAGAGATGCCGCCACCGCGGAAGCCCCAGCGCAAAGCAATCAAGGTTACA
AGCGAAGAGAAGGAGGCTAAAGCCAGAGAGCGGGAGGCGGCTAAGGCACA
AAGGGAACACGACAGGCAACTTGAAAAGGAGCGCAAGCAGAAAGCCAAGG
AAGATAAAGCCCGCGAAAAGCAACTCGCAGCGGACATTGCTGAGGTCAAC
AAGCTCAAGGTGGACAAGAAGGATTCGACGCATGAGATGCTAATTGACCT
CGCCTCTACATTTACCGACACAAGTCTCGGGAATCAGACCTCGGAGCTTA
TGCGCCTTCTCAAAGTTGATCTCTCATTTTTCCCCAGTACCATTCCGAAT
ATCGTCAAGTGGCGTCGCAAGGTTCGGGCTACATATAACGACTCCCTTGG
TCACTGGGAACCGTGCGCGCTTCACATCCGCGACGAAGAGGAGCATGTCC
TATGTTTGATAGCGGCTCAAGACTTTATCAATATGATCGTGGCCCCAACA
ACCGAACCAAGAAATACTATCAACGACCACGTTGAGCGCCTGAAATTAGC
CTACCCAAAGTCTCGACCGATCTATTTAATCGAAGGCTTGACAAGTCTAA
TGCGGAAGAATAACAATGCACAAAACAGAGCCTACCAAGCCGCTGTGCGA
CGACAATATGAAGACAGCTCTGCCCGTCCCTCAACGCGGAGAAAGCAACA
GCAGCCTGAACCGGTTACGCCTATAGACAGCGACACGGTTGAAGACGCTC
TCCTCGATTTACAGGTGACCCATTCGTGCCTAATCCATCATACAAGCTCC
CCTGCAGAGTCCGCGGAATGGATCAAGAACTTCACTGAGTATATTTCCAC
TGTGCCCTATCGCCGGGAGCGGATGGACTTGAATGACTCCGCATTTTGTA
TGGATGTAGGACAAGTAAAGCCCGGCGAGAACCGATCCGACGCATTCGTG
AAGATGCTCCAGGAGGTGAACCGAGTCACGGCGTCAATGGCATATGGCAT
TGCGACGCAATACCCAAGTGCGATGGATTTGGTAAATGCGATGCGGAAAC
ATGGACCGGGGCTATTAGAAGACGTCAAGAAATCAGCAAACAAAAACGGC
GCCCTCACCGATTCACGCATTGGTCCAGCCGTGAGCAGACGATTGTATAA
AGTATTCATGGGAATGGATCCGACGTCGACTGATATTTGAATGCCAGAGG
TCATCGATCTCCTCTCCTCCACCCCTCCGCCCCCGTTAGAGCGACGTGAG
CAGCTCTCCATCCGCAGAGCGCATTCTCACCCGCCTGTCGTACCCGCCTC
GGACTCCATCTTCTCCGACGAAATTGACCTCTCCGCATTTACCTACGATA
ACCCCATCGAGCAGCCCGCCAAACGACGGCGCTTGAGCCATGAGATCACA
CCCGTCAAAGATGTACCGCTTCCACCAGCTAAGAACTCGCTGTTCCTCTT
CTCCGATGACGACATAATCTTATCCTCGGACGGTCCCGCCCCTACAAAAC
CTCCGGCCTGGAATGGAGAATCCGACCCTATTGTCTTCACCTCATCGGCG
CCTGAACCCACTCATAATCTACCGGTCAGACCAGCCATAAGCTCGCGTGC
TGTAAACACTATCTCACTCGATGATGATGATGCTGGCAATTCCAGTGACA
CCCGCAGTAACAACCGACCCCGGAAAGAGGCGATTCAAGTGTCCAGCGAC
CAATTGGATTTCCCGGATGTCGACGATTTACTTGATGTGGCCCAGCGAGT
CGAAGCAAACGCATTTTCAAGTCGGACTGCGAATCTACTAGCAACCCTTG
AAGACCGTTCCCGTGGCAGCAATGGCGAATCTGCGTCCAGGTCGTCGAGA
GGTCGGAGGATCCAGGATCAAAGCGATGATATAGAGGTTGAAGAGATGCC
GCCACCGCGGAAGCCCCAGCGCAAAGCAATCAAGGTTACAAGCGAAGAGA
AGGAGGCTAAAGCCAGAGAGCGGGAGGCGGCTAAGGCACAAAGGGAACAC
GACAGGCAACTTGAAAAGGAGCGCAAGCAGAAAGCCAAGGAAGATAAAGC
CCGCGAAAAGCAACTCGCAGCGGACATTGCTGAGGTCAACAAGCTCAAGG
TGGACAAGAAGGATTCGACGCATGAGATGCTAATTGACCTCGCCTCTACA
TTTACCGACACAAGTCTCGGGAATCAGACCTCGGAGCTTATGCGCCTTCT
CAAAGTTGATCTCTCATTTTTCCCCAGTACCATTCCGAATATCGTCAAGT
GGCGTCGCAAGGTTCGGGCTACATATAACGACTCCCTTGGTCACTGGGAA
CCGTGCGCGCTTCACATCCGCGACGAAGAGGAGCATGTCCTATGTTTGAT
AGCGGCTCAAGACTTTATCAATATGATCGTGGCCCCAACAACCGAACCAA
GAAATACTATCAACGACCACGTTGAGCGCCTGAAATTAGCCTACCCAAAG
TCTCGACCGATCTATTTAATCGAAGGCTTGACAAGTCTAATGCGGAAGAA
TAACAATGCACAAAACAGAGCCTACCAAGCCGCTGTGCGACGACAATATG
AAGACAGCTCTGCCCGTCCCTCAACGCGGAGAAAGCAACAGCAGCCTGAA
CCGGTTACGCCTATAGACAGCGACACGGTTGAAGACGCTCTCCTCGATTT
ACAGGTGACCCATTCGTGCCTAATCCATCATACAAGCTCCCCTGCAGAGT
CCGCGGAATGGATCAAGAACTTCACTGAGTATATTTCCACTGTGCCCTAT
CGCCGGGAGCGGATGGACTTGAATGACTCCGCATTTTGTATGGATGTAGG
ACAAGTAAAGCCCGGCGAGAACCGATCCGACGCATTCGTGAAGATGCTCC
AGGAGGTGAACCGAGTCACGGCGTCAATGGCATATGGCATTGCGACGCAA
TACCCAAGTGCGATGGATTTGGTAAATGCGATGCGGAAACATGGACCGGG
GCTATTAGAAGACGTCAAGAAATCAGCAAACAAAAACGGCGCCCTCACCG
ATTCACGCATTGGTCCAGCCGTGAGCAGACGATTGTATAAAGTATTCATG
GGAATGGATCCGACGTCGACTGATATTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0048476Holliday junction resolvase complex
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0004518nuclease activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002221ATCC10864_002221Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002221-T1.exon1ATCC10864_002221-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_002221-T1.exon2ATCC10864_002221-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002221-T1.cdsATCC10864_002221-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002221-T1ATCC10864_002221-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR006166
InterProIPR033310
InterProIPR042530
PFAMPF02732
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000048supercontigMCQH01000048:650943..652903 +
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