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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000051:178565..180211+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_002392-T1 ID=ATCC10864_002392-T1|Name=ATCC10864_002392-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1647bp|location=Sequence derived from alignment at MCQH01000051:178565..180211+ (Aspergillus niger ATCC 10864)
ATGACACGTGAATCGAATATCGTAGGCGGATCGCTTGCAGCGGCACTCCC
AGTCACAGACAAGTACTGGTTTCAGCAACCGCATTTGCTACGACTGAACC
TAGTCCTTCTCATACCGCTGCTCTCGTCCTCCACGTTTGGCTACGATGGT
GAGGAGTGTATACAATAGTCACTTGTGTGACTCTAAAGACTAAAGACATG
ATATTACAGGGTCGTTGATGAACGGACTGCAATCCTTGGAACAATGGCAG
ACATACTTCAACAATCCCACGGGCAGCCTCTTGGGAACCATAGTGGCCGC
GCAGTCCATCGGCAGTGTCATCGCGCTTCCATTCCTAGGAAACCTCTGCG
ACTGGTATGGTCGCAAGCCGATTCTATTTACCGGACTTATCCTCATCTGC
ATTGCCGCAACTATCCAATGTGCGTCGGTAAATCTGGCTATGTTCATAGT
AGCCCGCATTTTGATTGGAATTGGAGGGATGTTCAGCTCCCAGCCAAGCC
CGATGCTGATTGCGGAATTGGCATACCCTACACATCGTGGTAAATATACT
TCGGCTTATTGGACCATGTACTACCTAGGTGCCATTCTATCCTCATGGTG
CACGTTTGGCACACAATCACTATCTGGAAGTTGGTCTTGGCGCACCCCGT
CCATCTTGCAAGCAGGGTATCCTGTGGTGCAGCTAGCCTTCCTCTACTGG
GTTCCGGAATCCCCTCGCTGGCTGGTAGCCCAGAACCGGATCCAAGAGGC
TACTGATATTCTAAAGATATACCACGCGGGCCAAAGGAATCCGGATGAAG
TGCCTTCACCACTTGTTTCAGTGGAGATGGCCGAGATTTCGCATGCCATC
GAACTCGAGAAGAGCTTCGAAGCCACGGGATGGTCCGCTTTAGTAGCAAC
ACCAGGTAATTTCGCCTATTCTCTCCCTTGTTTAGACCGGCTACCGATAC
TAACAACAAAAACAAAGGCAACCGCAAACGAACCACGATCGCAATTTGCG
TCGGCGCCTTCGCACAATGGAACGGCATAGCCGTAGTCTCGTACTATCTC
TCCCTGGTCCTAGACTCTGTCGGTATTACATCCTCCTACACGCAAACCTT
GATCAACGGCTTCCTCCAACTCTTCAACTTCGCCGCCGCACTAATGGCCG
CCTTCCTCGTCGACCGACTCGGTCGCCGCACGTTATTTGTCTGGAGCAGC
ATAGGCATGTTCATCTCCTTTATAGTATGGGCAATTTGTTCGGCCCTCAA
CAGCGAGACTGGCTCCAAAGCCGCAGGCTACGTCGTCATAATCTGTGTCT
TCGTCGTATACTTCCACTACGATATCGCCTGGACTCCCTTACTCCTCGGG
TACCCCACAGAAATCTTTCCTTACTCGCTTCGCTCGAAGGGGCTAGCCGT
CGAGATGATGTCCGTTTATGGATCACTTATCATTGCATCGTTCTGCAACC
CGATAGGAATGGAGAATTTGGGATGGAGGTATTATATTGTGTTCTGTGTC
TTCCTTATGGGGATCTTGGCCACGGTTTATTTCTATTTTCCGGAGACAAA
GGGTCATACGCTAGAAGAGATTGCCGTTATTTTTGATGGGGACCGATCGG
ATCTGCGGCACGGTGATGATGATTGTCTCGCGGATGGGAAGAAATGA back to topCoding sequence (CDS) from alignment at MCQH01000051:178565..180211+ >ATCC10864_002392-T1 ID=ATCC10864_002392-T1|Name=ATCC10864_002392-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4572bp|location=Sequence derived from alignment at MCQH01000051:178565..180211+ (Aspergillus niger ATCC 10864)
ATGACACGTGAATCGAATATCGTAGGCGGATCGCTTGCAGCGGCACTCCC
AGTCACAGACAAGTACTGGTTTCAGCAACCGCATTTGCTACGACTGAACC
TAGTCCTTCTCATACCGCTGCTCTCGTCCTCCACGTTTGGCTACGATGGG
TCGTTGATGAACGGACTGCAATCCTTGGAACAATGGCAGACATACTTCAA
CAATCCCACGGGCAGCCTCTTGGGAACCATAGTGGCCGCGCAGTCCATCG
GCAGTGTCATCGCGCTTCCATTCCTAGGAAACCTCTGCGACTGGTATGGT
CGCAAGCCGATTCTATTTACCGGACTTATCCTCATCTGCATTGCCGCAAC
TATCCAATGTGCGTCGGTAAATCTGGCTATGTTCATAGTAGCCCGCATTT
TGATTGGAATTGGAGGGATGTTCAGCTCCCAGCCAAGCCCGATGCTGATT
GCGGAATTGGCATACCCTACACATCGTGGTAAATATACTTCGGCTTATTG
GACCATGTACTACCTAGGTGCCATTCTATCCTCATGGTGCACGTTTGGCA
CACAATCACTATCTGGAAGTTGGTCTTGGCGCACCCCGTCCATCTTGCAA
GCAGGGTATCCTGTGGTGCAGCTAGCCTTCCTCTACTGGGTTCCGGAATC
CCCTCGCTGGCTGGTAGCCCAGAACCGGATCCAAGAGGCTACTGATATTC
TAAAGATATACCACGCGGGCCAAAGGAATCCGGATGAAGTGCCTTCACCA
CTTGTTTCAGTGGAGATGGCCGAGATTTCGCATGCCATCGAACTCGAGAA
GAGCTTCGAAGCCACGGGATGGTCCGCTTTAGTAGCAACACCAGGCAACC
GCAAACGAACCACGATCGCAATTTGCGTCGGCGCCTTCGCACAATGGAAC
GGCATAGCCGTAGTCTCGTACTATCTCTCCCTGGTCCTAGACTCTGTCGG
TATTACATCCTCCTACACGCAAACCTTGATCAACGGCTTCCTCCAACTCT
TCAACTTCGCCGCCGCACTAATGGCCGCCTTCCTCGTCGACCGACTCGGT
CGCCGCACGTTATTTGTCTGGAGCAGCATAGGCATGTTCATCTCCTTTAT
AGTATGGGCAATTTGTTCGGCCCTCAACAGCGAGACTGGCTCCAAAGCCG
CAGGCTACGTCGTCATAATCTGTGTCTTCGTCGTATACTTCCACTACGAT
ATCGCCTGGACTCCCTTACTCCTCGGGTACCCCACAGAAATCTTTCCTTA
CTCGCTTCGCTCGAAGGGGCTAGCCGTCGAGATGATGTCCGTTTATGGAT
CACTTATCATTGCATCGTTCTGCAACCCGATAGGAATGGAGAATTTGGGA
TGGAGGTATTATATTGTGTTCTGTGTCTTCCTTATGGGGATCTTGGCCAC
GGTTTATTTCTATTTTCCGGAGACAAAGGGTCATACGCTAGAAGAGATTG
CCGTTATTTTTGATGGGGACCGATCGGATCTGCGGCACGGTGATGATGAT
TGTCTCGCGGATGGGAAGAAATGAATGACACGTGAATCGAATATCGTAGG
CGGATCGCTTGCAGCGGCACTCCCAGTCACAGACAAGTACTGGTTTCAGC
AACCGCATTTGCTACGACTGAACCTAGTCCTTCTCATACCGCTGCTCTCG
TCCTCCACGTTTGGCTACGATGGGTCGTTGATGAACGGACTGCAATCCTT
GGAACAATGGCAGACATACTTCAACAATCCCACGGGCAGCCTCTTGGGAA
CCATAGTGGCCGCGCAGTCCATCGGCAGTGTCATCGCGCTTCCATTCCTA
GGAAACCTCTGCGACTGGTATGGTCGCAAGCCGATTCTATTTACCGGACT
TATCCTCATCTGCATTGCCGCAACTATCCAATGTGCGTCGGTAAATCTGG
CTATGTTCATAGTAGCCCGCATTTTGATTGGAATTGGAGGGATGTTCAGC
TCCCAGCCAAGCCCGATGCTGATTGCGGAATTGGCATACCCTACACATCG
TGGTAAATATACTTCGGCTTATTGGACCATGTACTACCTAGGTGCCATTC
TATCCTCATGGTGCACGTTTGGCACACAATCACTATCTGGAAGTTGGTCT
TGGCGCACCCCGTCCATCTTGCAAGCAGGGTATCCTGTGGTGCAGCTAGC
CTTCCTCTACTGGGTTCCGGAATCCCCTCGCTGGCTGGTAGCCCAGAACC
GGATCCAAGAGGCTACTGATATTCTAAAGATATACCACGCGGGCCAAAGG
AATCCGGATGAAGTGCCTTCACCACTTGTTTCAGTGGAGATGGCCGAGAT
TTCGCATGCCATCGAACTCGAGAAGAGCTTCGAAGCCACGGGATGGTCCG
CTTTAGTAGCAACACCAGGCAACCGCAAACGAACCACGATCGCAATTTGC
GTCGGCGCCTTCGCACAATGGAACGGCATAGCCGTAGTCTCGTACTATCT
CTCCCTGGTCCTAGACTCTGTCGGTATTACATCCTCCTACACGCAAACCT
TGATCAACGGCTTCCTCCAACTCTTCAACTTCGCCGCCGCACTAATGGCC
GCCTTCCTCGTCGACCGACTCGGTCGCCGCACGTTATTTGTCTGGAGCAG
CATAGGCATGTTCATCTCCTTTATAGTATGGGCAATTTGTTCGGCCCTCA
ACAGCGAGACTGGCTCCAAAGCCGCAGGCTACGTCGTCATAATCTGTGTC
TTCGTCGTATACTTCCACTACGATATCGCCTGGACTCCCTTACTCCTCGG
GTACCCCACAGAAATCTTTCCTTACTCGCTTCGCTCGAAGGGGCTAGCCG
TCGAGATGATGTCCGTTTATGGATCACTTATCATTGCATCGTTCTGCAAC
CCGATAGGAATGGAGAATTTGGGATGGAGGTATTATATTGTGTTCTGTGT
CTTCCTTATGGGGATCTTGGCCACGGTTTATTTCTATTTTCCGGAGACAA
AGGGTCATACGCTAGAAGAGATTGCCGTTATTTTTGATGGGGACCGATCG
GATCTGCGGCACGGTGATGATGATTGTCTCGCGGATGGGAAGAAATGAAT
GACACGTGAATCGAATATCGTAGGCGGATCGCTTGCAGCGGCACTCCCAG
TCACAGACAAGTACTGGTTTCAGCAACCGCATTTGCTACGACTGAACCTA
GTCCTTCTCATACCGCTGCTCTCGTCCTCCACGTTTGGCTACGATGGGTC
GTTGATGAACGGACTGCAATCCTTGGAACAATGGCAGACATACTTCAACA
ATCCCACGGGCAGCCTCTTGGGAACCATAGTGGCCGCGCAGTCCATCGGC
AGTGTCATCGCGCTTCCATTCCTAGGAAACCTCTGCGACTGGTATGGTCG
CAAGCCGATTCTATTTACCGGACTTATCCTCATCTGCATTGCCGCAACTA
TCCAATGTGCGTCGGTAAATCTGGCTATGTTCATAGTAGCCCGCATTTTG
ATTGGAATTGGAGGGATGTTCAGCTCCCAGCCAAGCCCGATGCTGATTGC
GGAATTGGCATACCCTACACATCGTGGTAAATATACTTCGGCTTATTGGA
CCATGTACTACCTAGGTGCCATTCTATCCTCATGGTGCACGTTTGGCACA
CAATCACTATCTGGAAGTTGGTCTTGGCGCACCCCGTCCATCTTGCAAGC
AGGGTATCCTGTGGTGCAGCTAGCCTTCCTCTACTGGGTTCCGGAATCCC
CTCGCTGGCTGGTAGCCCAGAACCGGATCCAAGAGGCTACTGATATTCTA
AAGATATACCACGCGGGCCAAAGGAATCCGGATGAAGTGCCTTCACCACT
TGTTTCAGTGGAGATGGCCGAGATTTCGCATGCCATCGAACTCGAGAAGA
GCTTCGAAGCCACGGGATGGTCCGCTTTAGTAGCAACACCAGGCAACCGC
AAACGAACCACGATCGCAATTTGCGTCGGCGCCTTCGCACAATGGAACGG
CATAGCCGTAGTCTCGTACTATCTCTCCCTGGTCCTAGACTCTGTCGGTA
TTACATCCTCCTACACGCAAACCTTGATCAACGGCTTCCTCCAACTCTTC
AACTTCGCCGCCGCACTAATGGCCGCCTTCCTCGTCGACCGACTCGGTCG
CCGCACGTTATTTGTCTGGAGCAGCATAGGCATGTTCATCTCCTTTATAG
TATGGGCAATTTGTTCGGCCCTCAACAGCGAGACTGGCTCCAAAGCCGCA
GGCTACGTCGTCATAATCTGTGTCTTCGTCGTATACTTCCACTACGATAT
CGCCTGGACTCCCTTACTCCTCGGGTACCCCACAGAAATCTTTCCTTACT
CGCTTCGCTCGAAGGGGCTAGCCGTCGAGATGATGTCCGTTTATGGATCA
CTTATCATTGCATCGTTCTGCAACCCGATAGGAATGGAGAATTTGGGATG
GAGGTATTATATTGTGTTCTGTGTCTTCCTTATGGGGATCTTGGCCACGG
TTTATTTCTATTTTCCGGAGACAAAGGGTCATACGCTAGAAGAGATTGCC
GTTATTTTTGATGGGGACCGATCGGATCTGCGGCACGGTGATGATGATTG
TCTCGCGGATGGGAAGAAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| PFAM | PF07690 |
| InterPro | IPR036259 |
| PFAM | PF00083 |
| InterPro | IPR020846 |
| InterPro | IPR005828 |
| InterPro | IPR003663 |
| InterPro | IPR005829 |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000051 | supercontig | MCQH01000051:178565..180211 + |
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