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ATCC10864_002671-T1, ATCC10864_002671-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002671-T1
Unique NameATCC10864_002671-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000053:486178..487076+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002671-T1 ID=ATCC10864_002671-T1|Name=ATCC10864_002671-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=899bp|location=Sequence derived from alignment at MCQH01000053:486178..487076+ (Aspergillus niger ATCC 10864)
ATGTCACGACACGCCCAAGTGGAGGAGGTGTATGACTCCGACCCGGAGGA
AGTTGCTCCCTCCGATTCCTCGCCCGCCAACTTTGCCAATGAGTCCCTCC
TTTCTGGAGCCGGAGTACCTATGTCTGGCTCAGTACCCATGAGACCCGCT
CCCGAACCTCAGCGCGAAATCCCCAAGCATTACCAGTGCCTGTATCCGAT
ATACTTCGACAAGTCGCGGACCCGCGCGGAGGGCCGCAAGGTCGGAAGTG
AGCTGGCGGTTGAGAACCCGCTGGCGAGGGACATTGTCGATGCGGTGCAG
ATGTTGGGACTGAATGTCGGGTTCGAGCCTGAGAAGCTGCACCCGAAGGA
CTGGGCCAACCCTGGACGTGTGCGCGTTTTGCTGAAGGACGAGGATGGCA
AATTGGTTAACTCGAGGATCAAGAACAGTTAGTGTACCCCAACTTGTCCG
CAAGTTACTATCAAATCCGACGCCTTTTGATATGGCCTGATCACAGTTCC
CTTTGTCTGACCATAACTACAGAGCACCACCTTTACATCCTCGTGGCGCA
ATACCTCAAGGCTCACCCTACCACCGAAGAATCCCCCTACCGTCTTAGAA
TTCGAGGACTCCCTATGCCCGAGAAACTGCCTGCTGCGCCTGCCGCTCCC
CGCGGATGGAAGATCGGAAAGATCCTGCCGATACACTCTCCGGCCTACAG
CGGTGGTGGAGTCAGCGATAACCCGCTCAAGGACGCCATGGCTGAAATGC
AGAACATGCAGGGTATGCCCGGAATGCCCCAGATACCTGGAATGCCGGAT
CTGGCAGGAATGATGGGAGGAATGGGAGGAATGGGTGGAAGTCCGTCTGC
TGGAGGCAGCGAAAAGAAGAAGAAGGATAAGAAGAAGGGCAAGGCGTGA
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Coding sequence (CDS) from alignment at MCQH01000053:486178..487076+

>ATCC10864_002671-T1 ID=ATCC10864_002671-T1|Name=ATCC10864_002671-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1608bp|location=Sequence derived from alignment at MCQH01000053:486178..487076+ (Aspergillus niger ATCC 10864)
ATGTCACGACACGCCCAAGTGGAGGAGGTGTATGACTCCGACCCGGAGGA
AGTTGCTCCCTCCGATTCCTCGCCCGCCAACTTTGCCAATGAGTCCCTCC
TTTCTGGAGCCGGAGTACCTATGTCTGGCTCAGTACCCATGAGACCCGCT
CCCGAACCTCAGCGCGAAATCCCCAAGCATTACCAGTGCCTGTATCCGAT
ATACTTCGACAAGTCGCGGACCCGCGCGGAGGGCCGCAAGGTCGGAAGTG
AGCTGGCGGTTGAGAACCCGCTGGCGAGGGACATTGTCGATGCGGTGCAG
ATGTTGGGACTGAATGTCGGGTTCGAGCCTGAGAAGCTGCACCCGAAGGA
CTGGGCCAACCCTGGACGTGTGCGCGTTTTGCTGAAGGACGAGGATGGCA
AATTGGTTAACTCGAGGATCAAGAACAAGCACCACCTTTACATCCTCGTG
GCGCAATACCTCAAGGCTCACCCTACCACCGAAGAATCCCCCTACCGTCT
TAGAATTCGAGGACTCCCTATGCCCGAGAAACTGCCTGCTGCGCCTGCCG
CTCCCCGCGGATGGAAGATCGGAAAGATCCTGCCGATACACTCTCCGGCC
TACAGCGGTGGTGGAGTCAGCGATAACCCGCTCAAGGACGCCATGGCTGA
AATGCAGAACATGCAGGGTATGCCCGGAATGCCCCAGATACCTGGAATGC
CGGATCTGGCAGGAATGATGGGAGGAATGGGAGGAATGGGTGGAAGTCCG
TCTGCTGGAGGCAGCGAAAAGAAGAAGAAGGATAAGAAGAAGGGCAAGGC
GTGAATGTCACGACACGCCCAAGTGGAGGAGGTGTATGACTCCGACCCGG
AGGAAGTTGCTCCCTCCGATTCCTCGCCCGCCAACTTTGCCAATGAGTCC
CTCCTTTCTGGAGCCGGAGTACCTATGTCTGGCTCAGTACCCATGAGACC
CGCTCCCGAACCTCAGCGCGAAATCCCCAAGCATTACCAGTGCCTGTATC
CGATATACTTCGACAAGTCGCGGACCCGCGCGGAGGGCCGCAAGGTCGGA
AGTGAGCTGGCGGTTGAGAACCCGCTGGCGAGGGACATTGTCGATGCGGT
GCAGATGTTGGGACTGAATGTCGGGTTCGAGCCTGAGAAGCTGCACCCGA
AGGACTGGGCCAACCCTGGACGTGTGCGCGTTTTGCTGAAGGACGAGGAT
GGCAAATTGGTTAACTCGAGGATCAAGAACAAGCACCACCTTTACATCCT
CGTGGCGCAATACCTCAAGGCTCACCCTACCACCGAAGAATCCCCCTACC
GTCTTAGAATTCGAGGACTCCCTATGCCCGAGAAACTGCCTGCTGCGCCT
GCCGCTCCCCGCGGATGGAAGATCGGAAAGATCCTGCCGATACACTCTCC
GGCCTACAGCGGTGGTGGAGTCAGCGATAACCCGCTCAAGGACGCCATGG
CTGAAATGCAGAACATGCAGGGTATGCCCGGAATGCCCCAGATACCTGGA
ATGCCGGATCTGGCAGGAATGATGGGAGGAATGGGAGGAATGGGTGGAAG
TCCGTCTGCTGGAGGCAGCGAAAAGAAGAAGAAGGATAAGAAGAAGGGCA
AGGCGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0048500signal recognition particle
Vocabulary: Biological Process
TermDefinition
GO:0006614SRP-dependent cotranslational protein targeting to membrane
Vocabulary: Molecular Function
TermDefinition
GO:00083127S RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002671ATCC10864_002671Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002671-T1.exon1ATCC10864_002671-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_002671-T1.exon2ATCC10864_002671-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002671-T1.cdsATCC10864_002671-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002671-T1ATCC10864_002671-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR002778
InterProIPR022938
InterProIPR036521
PFAMPF01922
Properties
Property NameValue
NoteBUSCO:EOG092647CM
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000053supercontigMCQH01000053:486178..487076 +
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