You are here

Home

ATCC10864_002724-T1, ATCC10864_002724-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002724-T1
Unique NameATCC10864_002724-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000053:613073..614107+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002724-T1 ID=ATCC10864_002724-T1|Name=ATCC10864_002724-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1035bp|location=Sequence derived from alignment at MCQH01000053:613073..614107+ (Aspergillus niger ATCC 10864)
ATGCCGTCAAATACTTCCACGACTAGCGGTGTCCCACCTGCGGGTGACGG
TGGTGAGCCTGCATCCCTGCAACAATATCCTCAGAGTCTGGGAAGCTAAG
TGATAGCAGGTCAAGAAAAGCAAAAGATGCTTCTCTCTTCCGAAACAGGT
CATTTTAGCATGATCAGGTTAGCCATTGAGAGTCCTTTGCTAGGAATTCA
ACCGAACCGTTGCACTTACACATTTACGCACATCAGGGCTCTGCATCTTG
CTGATCTAGTAACTGAACTCAATGGTAATAAACTAGATCCTTCCTCAGAT
CCGTCTACAGCCCGAATCAAAGGCATCAACTAACACCCATTATAGGATTC
TGTGGAGGCAAGCACAAATTTTCTCCTTCCTTCGAGCCCGACGACCCGGA
ACTAACCGCTCATACACAGTGATGTCCGTTTTTTCTTCGATGCGTTACTG
TCTTGGTGACCCTCGTGATTTTGGTGCAATTTGGGCGGCTCTGATCTTCA
TGCCCTTCGGGCTGTTTTTCGATTTCATGGATGGACGGATTGCTAGGTGG
AGGAAAAAGTCGTCGCTCATGGGACAAGAGCTTGATTCACTGGCCGATTT
GGTACGGTCTCCCACTCCACTTGTCACAATATTCTTTTCACTCATTGTTC
GCTTTCCGTGCTTTAGATTTCCTTCGGAATGGCACCCGCTGCCGCAGCTT
TTGCGCTCGGAATGCGCACCAGCCTCGACCATTTGCTCCTCTCCTTCTTT
GTTCTGTGCGGCCTGACACGCTTGGCACGGTTCAACGTGACTGTTGCTGT
TCTGCCGAAAGACAAGTCTGGAAAGTCGAAGTACTTCGAGGGCACGCCCA
TCCCAACGACCTTGTCAATCACCTTTTTCCTGGCCTACTGCGTCTCTCAA
GACTGGGTGCTGGACGATCTACCCCTCGGCCTTGTAGCCCAGGGCACAGC
GTTCGAGTTCCACCCGCTGGTACTGTTGTTTGTCTTGCACGGATGCCTCA
TGGTCAGCAAAACGCTGCATATCCCTAAGCCTTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000053:613073..614107+

>ATCC10864_002724-T1 ID=ATCC10864_002724-T1|Name=ATCC10864_002724-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3495bp|location=Sequence derived from alignment at MCQH01000053:613073..614107+ (Aspergillus niger ATCC 10864)
ATGCCGTCAAATACTTCCACGACTAGCGGTGTCCCACCTGCGGGTGACGG
TGGTCAAGAAAAGCAAAAGATGCTTCTCTCTTCCGAAACAGGTCATTTTA
GCATGATCAGGGCTCTGCATCTTGCTGATCTAGTAACTGAACTCAATGTG
ATGTCCGTTTTTTCTTCGATGCGTTACTGTCTTGGTGACCCTCGTGATTT
TGGTGCAATTTGGGCGGCTCTGATCTTCATGCCCTTCGGGCTGTTTTTCG
ATTTCATGGATGGACGGATTGCTAGGTGGAGGAAAAAGTCGTCGCTCATG
GGACAAGAGCTTGATTCACTGGCCGATTTGATTTCCTTCGGAATGGCACC
CGCTGCCGCAGCTTTTGCGCTCGGAATGCGCACCAGCCTCGACCATTTGC
TCCTCTCCTTCTTTGTTCTGTGCGGCCTGACACGCTTGGCACGGTTCAAC
GTGACTGTTGCTGTTCTGCCGAAAGACAAGTCTGGAAAGTCGAAGTACTT
CGAGGGCACGCCCATCCCAACGACCTTGTCAATCACCTTTTTCCTGGCCT
ACTGCGTCTCTCAAGACTGGGTGCTGGACGATCTACCCCTCGGCCTTGTA
GCCCAGGGCACAGCGTTCGAGTTCCACCCGCTGGTACTGTTGTTTGTCTT
GCACGGATGCCTCATGGTCAGCAAAACGCTGCATATCCCTAAGCCTTAAA
TGCCGTCAAATACTTCCACGACTAGCGGTGTCCCACCTGCGGGTGACGGT
GGTCAAGAAAAGCAAAAGATGCTTCTCTCTTCCGAAACAGGTCATTTTAG
CATGATCAGGGCTCTGCATCTTGCTGATCTAGTAACTGAACTCAATGTGA
TGTCCGTTTTTTCTTCGATGCGTTACTGTCTTGGTGACCCTCGTGATTTT
GGTGCAATTTGGGCGGCTCTGATCTTCATGCCCTTCGGGCTGTTTTTCGA
TTTCATGGATGGACGGATTGCTAGGTGGAGGAAAAAGTCGTCGCTCATGG
GACAAGAGCTTGATTCACTGGCCGATTTGATTTCCTTCGGAATGGCACCC
GCTGCCGCAGCTTTTGCGCTCGGAATGCGCACCAGCCTCGACCATTTGCT
CCTCTCCTTCTTTGTTCTGTGCGGCCTGACACGCTTGGCACGGTTCAACG
TGACTGTTGCTGTTCTGCCGAAAGACAAGTCTGGAAAGTCGAAGTACTTC
GAGGGCACGCCCATCCCAACGACCTTGTCAATCACCTTTTTCCTGGCCTA
CTGCGTCTCTCAAGACTGGGTGCTGGACGATCTACCCCTCGGCCTTGTAG
CCCAGGGCACAGCGTTCGAGTTCCACCCGCTGGTACTGTTGTTTGTCTTG
CACGGATGCCTCATGGTCAGCAAAACGCTGCATATCCCTAAGCCTTAAAT
GCCGTCAAATACTTCCACGACTAGCGGTGTCCCACCTGCGGGTGACGGTG
GTCAAGAAAAGCAAAAGATGCTTCTCTCTTCCGAAACAGGTCATTTTAGC
ATGATCAGGGCTCTGCATCTTGCTGATCTAGTAACTGAACTCAATGTGAT
GTCCGTTTTTTCTTCGATGCGTTACTGTCTTGGTGACCCTCGTGATTTTG
GTGCAATTTGGGCGGCTCTGATCTTCATGCCCTTCGGGCTGTTTTTCGAT
TTCATGGATGGACGGATTGCTAGGTGGAGGAAAAAGTCGTCGCTCATGGG
ACAAGAGCTTGATTCACTGGCCGATTTGATTTCCTTCGGAATGGCACCCG
CTGCCGCAGCTTTTGCGCTCGGAATGCGCACCAGCCTCGACCATTTGCTC
CTCTCCTTCTTTGTTCTGTGCGGCCTGACACGCTTGGCACGGTTCAACGT
GACTGTTGCTGTTCTGCCGAAAGACAAGTCTGGAAAGTCGAAGTACTTCG
AGGGCACGCCCATCCCAACGACCTTGTCAATCACCTTTTTCCTGGCCTAC
TGCGTCTCTCAAGACTGGGTGCTGGACGATCTACCCCTCGGCCTTGTAGC
CCAGGGCACAGCGTTCGAGTTCCACCCGCTGGTACTGTTGTTTGTCTTGC
ACGGATGCCTCATGGTCAGCAAAACGCTGCATATCCCTAAGCCTTAAATG
CCGTCAAATACTTCCACGACTAGCGGTGTCCCACCTGCGGGTGACGGTGG
TCAAGAAAAGCAAAAGATGCTTCTCTCTTCCGAAACAGGTCATTTTAGCA
TGATCAGGGCTCTGCATCTTGCTGATCTAGTAACTGAACTCAATGTGATG
TCCGTTTTTTCTTCGATGCGTTACTGTCTTGGTGACCCTCGTGATTTTGG
TGCAATTTGGGCGGCTCTGATCTTCATGCCCTTCGGGCTGTTTTTCGATT
TCATGGATGGACGGATTGCTAGGTGGAGGAAAAAGTCGTCGCTCATGGGA
CAAGAGCTTGATTCACTGGCCGATTTGATTTCCTTCGGAATGGCACCCGC
TGCCGCAGCTTTTGCGCTCGGAATGCGCACCAGCCTCGACCATTTGCTCC
TCTCCTTCTTTGTTCTGTGCGGCCTGACACGCTTGGCACGGTTCAACGTG
ACTGTTGCTGTTCTGCCGAAAGACAAGTCTGGAAAGTCGAAGTACTTCGA
GGGCACGCCCATCCCAACGACCTTGTCAATCACCTTTTTCCTGGCCTACT
GCGTCTCTCAAGACTGGGTGCTGGACGATCTACCCCTCGGCCTTGTAGCC
CAGGGCACAGCGTTCGAGTTCCACCCGCTGGTACTGTTGTTTGTCTTGCA
CGGATGCCTCATGGTCAGCAAAACGCTGCATATCCCTAAGCCTTAAATGC
CGTCAAATACTTCCACGACTAGCGGTGTCCCACCTGCGGGTGACGGTGGT
CAAGAAAAGCAAAAGATGCTTCTCTCTTCCGAAACAGGTCATTTTAGCAT
GATCAGGGCTCTGCATCTTGCTGATCTAGTAACTGAACTCAATGTGATGT
CCGTTTTTTCTTCGATGCGTTACTGTCTTGGTGACCCTCGTGATTTTGGT
GCAATTTGGGCGGCTCTGATCTTCATGCCCTTCGGGCTGTTTTTCGATTT
CATGGATGGACGGATTGCTAGGTGGAGGAAAAAGTCGTCGCTCATGGGAC
AAGAGCTTGATTCACTGGCCGATTTGATTTCCTTCGGAATGGCACCCGCT
GCCGCAGCTTTTGCGCTCGGAATGCGCACCAGCCTCGACCATTTGCTCCT
CTCCTTCTTTGTTCTGTGCGGCCTGACACGCTTGGCACGGTTCAACGTGA
CTGTTGCTGTTCTGCCGAAAGACAAGTCTGGAAAGTCGAAGTACTTCGAG
GGCACGCCCATCCCAACGACCTTGTCAATCACCTTTTTCCTGGCCTACTG
CGTCTCTCAAGACTGGGTGCTGGACGATCTACCCCTCGGCCTTGTAGCCC
AGGGCACAGCGTTCGAGTTCCACCCGCTGGTACTGTTGTTTGTCTTGCAC
GGATGCCTCATGGTCAGCAAAACGCTGCATATCCCTAAGCCTTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016780phosphotransferase activity, for other substituted phosphate groups
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0008654phospholipid biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002724ATCC10864_002724Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002724-T1ATCC10864_002724-T1-proteinAspergillus niger ATCC 10864polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002724-T1.exon1ATCC10864_002724-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_002724-T1.exon2ATCC10864_002724-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_002724-T1.exon3ATCC10864_002724-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_002724-T1.exon4ATCC10864_002724-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_002724-T1.exon5ATCC10864_002724-T1.exon5Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002724-T1.cdsATCC10864_002724-T1.cdsAspergillus niger ATCC 10864CDS


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF01066
InterProIPR000462
InterProIPR016271
InterProIPR004533
InterProIPR043130
Properties
Property NameValue
NoteBUSCO:EOG09263MR4
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000053supercontigMCQH01000053:613073..614107 +
Powered by Drupal