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ATCC10864_002800-T1, ATCC10864_002800-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002800-T1
Unique NameATCC10864_002800-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000053:859631..860873-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002800-T1 ID=ATCC10864_002800-T1|Name=ATCC10864_002800-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1243bp|location=Sequence derived from alignment at MCQH01000053:859631..860873- (Aspergillus niger ATCC 10864)
ATGGTGCACACCAACGTCGTTAGTAAGTGGATCTTTTTCTCCCTTTGGGA
TATATATGGCAAGCAGAGGAGCATGAAGGAAGAATCTAACCGGGATACAT
AGTCATCGGCTCCGGCCCCGCCGCCCACACCGCGGCCATCTACCTTTCCC
GCGCTGAACTCAAGCCCGTCCTCTATGAGGGTATGCTGGCTAACGGCACC
GCCGCTGGCGGTCAGCTCACCACCACCACCGACATCGAGAACTTCCCCGG
TTTCCCGGACGGCATTGGCGGTGGAGAGCTGATGGAGAACATGCGCAAGC
AGTCTGTTCGCTTCGGCACGGAGGTTATCACCGAGACCATCACCAAGGTC
GACTTTTCCCAGAGACCCTTCAAGCTGTGGACGGAATGGAGTGACGGTCC
CACCGACGAGCCCGCTCACACTGCTGACGCCGTCATCATCGCCACCGGCG
CCAACGCTCGTCGCCTCAACCTTCCCGGTGAGGAGAAGTACTGGCAGAAC
GGTATCAGCGCCTGCGCTGTCTGCGACGGTGCCGTGCCCATCTTCCGCAA
CAAGCCCCTCTTCGTCATCGGTGGTGGTGACTCCGCCGCCGAGGAGGCTA
TGTTCCTGGCCAAGTACGGCAGCAGCGTCACTGTCCTTGTCCGTCGCGAC
AAGCTCCGTGCCAGCAAGGCCATGGCCAACCGTCTTCTGTCCCACCCTAA
GGTCACCGTCCGCTTCAACTCCGTCGCTACTGAGGTGCTCGGTGAGGAGA
AGCCCAACGGCCTGATGACCCACCTCAAGGTCAAGAACGTCGTTTCCGGC
GAGGAGGAGGTTGTTGACGCCAACGGTCTCTTCTACGCTGTTGGCCACGA
CCCCGCCACCACCCTGGTCAAGGGTCAGATCAAGCTCGATGAGGACGGAT
ACATCGTTACCCAGCCCGGTACCAGCTACACCAGTGTCGAGGGTGTTTTC
GCTTGCGGTGATGTCCAGGACAAGCGCTACCGCCAGGCCATCACCAGTGC
CGGTAAGCTTTACTCAGTTCCGAATGTATGTCAATTGCAATCAACTAACT
TTGACTCTCAGGATCCGGCTGCATTGCCGCTCTCGAGGCCGAGAAGTACA
TCGCCGAGCGCGAGTCCGGCGAGGAGCCCGCCACCTCCACCGAGAAGGCC
GCTATCAAGCCTGCCACCCAGGAAGTCAACGGTGAAGTCAAGCAGGACGC
CCAGGGTGCCGCCGCCGAGTACAAGTCCAACCCTCTGCTTTAA
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Coding sequence (CDS) from alignment at MCQH01000053:859631..860873-

>ATCC10864_002800-T1 ID=ATCC10864_002800-T1|Name=ATCC10864_002800-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3312bp|location=Sequence derived from alignment at MCQH01000053:859631..860873- (Aspergillus niger ATCC 10864)
GATCCGGCTGCATTGCCGCTCTCGAGGCCGAGAAGTACATCGCCGAGCGC
GAGTCCGGCGAGGAGCCCGCCACCTCCACCGAGAAGGCCGCTATCAAGCC
TGCCACCCAGGAAGTCAACGGTGAAGTCAAGCAGGACGCCCAGGGTGCCG
CCGCCGAGTACAAGTCCAACCCTCTGCTTTAATCATCGGCTCCGGCCCCG
CCGCCCACACCGCGGCCATCTACCTTTCCCGCGCTGAACTCAAGCCCGTC
CTCTATGAGGGTATGCTGGCTAACGGCACCGCCGCTGGCGGTCAGCTCAC
CACCACCACCGACATCGAGAACTTCCCCGGTTTCCCGGACGGCATTGGCG
GTGGAGAGCTGATGGAGAACATGCGCAAGCAGTCTGTTCGCTTCGGCACG
GAGGTTATCACCGAGACCATCACCAAGGTCGACTTTTCCCAGAGACCCTT
CAAGCTGTGGACGGAATGGAGTGACGGTCCCACCGACGAGCCCGCTCACA
CTGCTGACGCCGTCATCATCGCCACCGGCGCCAACGCTCGTCGCCTCAAC
CTTCCCGGTGAGGAGAAGTACTGGCAGAACGGTATCAGCGCCTGCGCTGT
CTGCGACGGTGCCGTGCCCATCTTCCGCAACAAGCCCCTCTTCGTCATCG
GTGGTGGTGACTCCGCCGCCGAGGAGGCTATGTTCCTGGCCAAGTACGGC
AGCAGCGTCACTGTCCTTGTCCGTCGCGACAAGCTCCGTGCCAGCAAGGC
CATGGCCAACCGTCTTCTGTCCCACCCTAAGGTCACCGTCCGCTTCAACT
CCGTCGCTACTGAGGTGCTCGGTGAGGAGAAGCCCAACGGCCTGATGACC
CACCTCAAGGTCAAGAACGTCGTTTCCGGCGAGGAGGAGGTTGTTGACGC
CAACGGTCTCTTCTACGCTGTTGGCCACGACCCCGCCACCACCCTGGTCA
AGGGTCAGATCAAGCTCGATGAGGACGGATACATCGTTACCCAGCCCGGT
ACCAGCTACACCAGTGTCGAGGGTGTTTTCGCTTGCGGTGATGTCCAGGA
CAAGCGCTACCGCCAGGCCATCACCAGTGCCGATGGTGCACACCAACGTC
GTTAGATCCGGCTGCATTGCCGCTCTCGAGGCCGAGAAGTACATCGCCGA
GCGCGAGTCCGGCGAGGAGCCCGCCACCTCCACCGAGAAGGCCGCTATCA
AGCCTGCCACCCAGGAAGTCAACGGTGAAGTCAAGCAGGACGCCCAGGGT
GCCGCCGCCGAGTACAAGTCCAACCCTCTGCTTTAATCATCGGCTCCGGC
CCCGCCGCCCACACCGCGGCCATCTACCTTTCCCGCGCTGAACTCAAGCC
CGTCCTCTATGAGGGTATGCTGGCTAACGGCACCGCCGCTGGCGGTCAGC
TCACCACCACCACCGACATCGAGAACTTCCCCGGTTTCCCGGACGGCATT
GGCGGTGGAGAGCTGATGGAGAACATGCGCAAGCAGTCTGTTCGCTTCGG
CACGGAGGTTATCACCGAGACCATCACCAAGGTCGACTTTTCCCAGAGAC
CCTTCAAGCTGTGGACGGAATGGAGTGACGGTCCCACCGACGAGCCCGCT
CACACTGCTGACGCCGTCATCATCGCCACCGGCGCCAACGCTCGTCGCCT
CAACCTTCCCGGTGAGGAGAAGTACTGGCAGAACGGTATCAGCGCCTGCG
CTGTCTGCGACGGTGCCGTGCCCATCTTCCGCAACAAGCCCCTCTTCGTC
ATCGGTGGTGGTGACTCCGCCGCCGAGGAGGCTATGTTCCTGGCCAAGTA
CGGCAGCAGCGTCACTGTCCTTGTCCGTCGCGACAAGCTCCGTGCCAGCA
AGGCCATGGCCAACCGTCTTCTGTCCCACCCTAAGGTCACCGTCCGCTTC
AACTCCGTCGCTACTGAGGTGCTCGGTGAGGAGAAGCCCAACGGCCTGAT
GACCCACCTCAAGGTCAAGAACGTCGTTTCCGGCGAGGAGGAGGTTGTTG
ACGCCAACGGTCTCTTCTACGCTGTTGGCCACGACCCCGCCACCACCCTG
GTCAAGGGTCAGATCAAGCTCGATGAGGACGGATACATCGTTACCCAGCC
CGGTACCAGCTACACCAGTGTCGAGGGTGTTTTCGCTTGCGGTGATGTCC
AGGACAAGCGCTACCGCCAGGCCATCACCAGTGCCGATGGTGCACACCAA
CGTCGTTAGATCCGGCTGCATTGCCGCTCTCGAGGCCGAGAAGTACATCG
CCGAGCGCGAGTCCGGCGAGGAGCCCGCCACCTCCACCGAGAAGGCCGCT
ATCAAGCCTGCCACCCAGGAAGTCAACGGTGAAGTCAAGCAGGACGCCCA
GGGTGCCGCCGCCGAGTACAAGTCCAACCCTCTGCTTTAATCATCGGCTC
CGGCCCCGCCGCCCACACCGCGGCCATCTACCTTTCCCGCGCTGAACTCA
AGCCCGTCCTCTATGAGGGTATGCTGGCTAACGGCACCGCCGCTGGCGGT
CAGCTCACCACCACCACCGACATCGAGAACTTCCCCGGTTTCCCGGACGG
CATTGGCGGTGGAGAGCTGATGGAGAACATGCGCAAGCAGTCTGTTCGCT
TCGGCACGGAGGTTATCACCGAGACCATCACCAAGGTCGACTTTTCCCAG
AGACCCTTCAAGCTGTGGACGGAATGGAGTGACGGTCCCACCGACGAGCC
CGCTCACACTGCTGACGCCGTCATCATCGCCACCGGCGCCAACGCTCGTC
GCCTCAACCTTCCCGGTGAGGAGAAGTACTGGCAGAACGGTATCAGCGCC
TGCGCTGTCTGCGACGGTGCCGTGCCCATCTTCCGCAACAAGCCCCTCTT
CGTCATCGGTGGTGGTGACTCCGCCGCCGAGGAGGCTATGTTCCTGGCCA
AGTACGGCAGCAGCGTCACTGTCCTTGTCCGTCGCGACAAGCTCCGTGCC
AGCAAGGCCATGGCCAACCGTCTTCTGTCCCACCCTAAGGTCACCGTCCG
CTTCAACTCCGTCGCTACTGAGGTGCTCGGTGAGGAGAAGCCCAACGGCC
TGATGACCCACCTCAAGGTCAAGAACGTCGTTTCCGGCGAGGAGGAGGTT
GTTGACGCCAACGGTCTCTTCTACGCTGTTGGCCACGACCCCGCCACCAC
CCTGGTCAAGGGTCAGATCAAGCTCGATGAGGACGGATACATCGTTACCC
AGCCCGGTACCAGCTACACCAGTGTCGAGGGTGTTTTCGCTTGCGGTGAT
GTCCAGGACAAGCGCTACCGCCAGGCCATCACCAGTGCCGATGGTGCACA
CCAACGTCGTTA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0019430removal of superoxide radicals
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0004791thioredoxin-disulfide reductase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TRR1ATCC10864_002800Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002800-T1ATCC10864_002800-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002800-T1.cdsATCC10864_002800-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002800-T1.exon3ATCC10864_002800-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_002800-T1.exon2ATCC10864_002800-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_002800-T1.exon1ATCC10864_002800-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR023753
PFAMPF13738
InterProIPR036188
InterProIPR005982
PFAMPF07992
InterProIPR008255
PFAMPF00070
Properties
Property NameValue
NoteBUSCO:EOG0926386D
Productthioredoxin-disulfide reductase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000053supercontigMCQH01000053:859631..860873 -
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