You are here

Home

ATCC10864_002805-T1, ATCC10864_002805-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002805-T1
Unique NameATCC10864_002805-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000053:878531..880082+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002805-T1 ID=ATCC10864_002805-T1|Name=ATCC10864_002805-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1552bp|location=Sequence derived from alignment at MCQH01000053:878531..880082+ (Aspergillus niger ATCC 10864)
ATGGATCAGCACGACGACTTCGACAGCGTCTCGTGGAGGCATGACCCGGA
CAGCGATCTCTCGCGACCCACGACCTCCGGAACAGACACAGAGGAACAGG
CGCCATACACTCACGATGTCAATGGCAAACGGAGGATGAGCAACGCTCAA
GAAAGCCCTCAGGCTGGACCACTGGCGGATGCCGTCGACCTGGCGGGCAT
CGGCGACGGCGTACTAGAGTGTCGGGTAGATTCACCGTTGAAGGAGAATG
ATGGAACGAAAGACGCTTATATCTCCTATTTGGTTACAACTACGGTGGGT
TATCTTTACCTTCAGTGATCTCAGATGGAAAAGGCTGTGCGGTTGCAGTG
CATGCTGACTAGAATGATAGACCGATTTCAAGTCCTTCCAGAAACCCGAG
TTCACCGTGCGACGCAGATTCACCGACTTCTACTTCCTATACAAGACACT
TTATCGCGAATACCCTGCCTGCGCCGTCCCGCCGCTGCCGGATAAGCATA
AGATGGAGTATGTCCGCGGCGATCGGTTCGGACCCGAATTCACTACCCGG
CGAGCATGGTCTTTACATCGCTTTTTGAAACGGCTTACGCTGCATCCCGT
GCTTCGTCGCGCACCGTTACTGGCCATCTTCCTGGAATCGCCCGACTGGA
ATGCACACATGCGGTTGCGGTCCACGCGCAACTCGACCAGCACCTCGGAC
GGCAGCGGGGTCCCTGGGATCTTTGACAACTTTACCGACACCTTTGTCAA
CGCTTTCACCAAGGTGCATAAGCCGGATAAGCGGTTTATTGAAGTGCGGG
AGAAGGCCGATAAACTGGACGAGGACCTCAATCATGTGGAGAAGATTGTA
GCCCGAGTGGCTCGGCGGGAATCGGATCTTGAGGCAGACTATAATGACCT
GGCTACGCAGTTCCGCAAACTTGTACCCCTGGAACCGGAGGTGGAGGTGC
CCCTACAAGTCTTTGCGGCCTCGGTAGAGGAGACGGGGCGCGGGCTCAAG
ACGCTCAAGGATCACACTGACCAGAATTATCTGGGGTCGCTGCGGGATAT
GGAGGCGTACATTGTCTCGCTTAAAGCCCTCCTCAAAACGCGCGAGCAGA
AACAGCTCGACTTCGAAGCGCTGGTTGACTATCGAAACAAGGCGGTGGCG
GAGCGGGACTCCCTCGCCTCTAACCCCTCGTCCTACTATGCCTCCAACCC
GCTGACCTCGTCCCCGGCCTCGTTCATCCGGTCCAAGATGGAGGACATGC
GGGGCGTCGACCACGAGCAGTCGCGACGCGAGAGGGTGCGGAAGTTGGAG
CTTCGCATTGACGAGCTCACGCGCGAGGTCGAATCGGCTAAAACGACGTC
GGAGATGTTCGACGAGGAAGTCGTGCGCGAGGTGGCAGACTTTGAGCGCA
TCAAGGCCGTAGAGTTCCGGGATACGCTGGGAGCGTTGGCCGAGAAGCAG
ATCGAGTTCTACCAGGGGGTACTGAATACCTGGGAACGATTTGTGGCTGA
GATGGAGGGAGATCTGGAAGAAGAGCATGACCCAGGCACGGAGGCCAGGT
GA
back to top

Coding sequence (CDS) from alignment at MCQH01000053:878531..880082+

>ATCC10864_002805-T1 ID=ATCC10864_002805-T1|Name=ATCC10864_002805-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2952bp|location=Sequence derived from alignment at MCQH01000053:878531..880082+ (Aspergillus niger ATCC 10864)
ATGGATCAGCACGACGACTTCGACAGCGTCTCGTGGAGGCATGACCCGGA
CAGCGATCTCTCGCGACCCACGACCTCCGGAACAGACACAGAGGAACAGG
CGCCATACACTCACGATGTCAATGGCAAACGGAGGATGAGCAACGCTCAA
GAAAGCCCTCAGGCTGGACCACTGGCGGATGCCGTCGACCTGGCGGGCAT
CGGCGACGGCGTACTAGAGTGTCGGGTAGATTCACCGTTGAAGGAGAATG
ATGGAACGAAAGACGCTTATATCTCCTATTTGGTTACAACTACGACCGAT
TTCAAGTCCTTCCAGAAACCCGAGTTCACCGTGCGACGCAGATTCACCGA
CTTCTACTTCCTATACAAGACACTTTATCGCGAATACCCTGCCTGCGCCG
TCCCGCCGCTGCCGGATAAGCATAAGATGGAGTATGTCCGCGGCGATCGG
TTCGGACCCGAATTCACTACCCGGCGAGCATGGTCTTTACATCGCTTTTT
GAAACGGCTTACGCTGCATCCCGTGCTTCGTCGCGCACCGTTACTGGCCA
TCTTCCTGGAATCGCCCGACTGGAATGCACACATGCGGTTGCGGTCCACG
CGCAACTCGACCAGCACCTCGGACGGCAGCGGGGTCCCTGGGATCTTTGA
CAACTTTACCGACACCTTTGTCAACGCTTTCACCAAGGTGCATAAGCCGG
ATAAGCGGTTTATTGAAGTGCGGGAGAAGGCCGATAAACTGGACGAGGAC
CTCAATCATGTGGAGAAGATTGTAGCCCGAGTGGCTCGGCGGGAATCGGA
TCTTGAGGCAGACTATAATGACCTGGCTACGCAGTTCCGCAAACTTGTAC
CCCTGGAACCGGAGGTGGAGGTGCCCCTACAAGTCTTTGCGGCCTCGGTA
GAGGAGACGGGGCGCGGGCTCAAGACGCTCAAGGATCACACTGACCAGAA
TTATCTGGGGTCGCTGCGGGATATGGAGGCGTACATTGTCTCGCTTAAAG
CCCTCCTCAAAACGCGCGAGCAGAAACAGCTCGACTTCGAAGCGCTGGTT
GACTATCGAAACAAGGCGGTGGCGGAGCGGGACTCCCTCGCCTCTAACCC
CTCGTCCTACTATGCCTCCAACCCGCTGACCTCGTCCCCGGCCTCGTTCA
TCCGGTCCAAGATGGAGGACATGCGGGGCGTCGACCACGAGCAGTCGCGA
CGCGAGAGGGTGCGGAAGTTGGAGCTTCGCATTGACGAGCTCACGCGCGA
GGTCGAATCGGCTAAAACGACGTCGGAGATGTTCGACGAGGAAGTCGTGC
GCGAGGTGGCAGACTTTGAGCGCATCAAGGCCGTAGAGTTCCGGGATACG
CTGGGAGCGTTGGCCGAGAAGCAGATCGAGTTCTACCAGGGGGTACTGAA
TACCTGGGAACGATTTGTGGCTGAGATGGAGGGAGATCTGGAAGAAGAGC
ATGACCCAGGCACGGAGGCCAGGTGAATGGATCAGCACGACGACTTCGAC
AGCGTCTCGTGGAGGCATGACCCGGACAGCGATCTCTCGCGACCCACGAC
CTCCGGAACAGACACAGAGGAACAGGCGCCATACACTCACGATGTCAATG
GCAAACGGAGGATGAGCAACGCTCAAGAAAGCCCTCAGGCTGGACCACTG
GCGGATGCCGTCGACCTGGCGGGCATCGGCGACGGCGTACTAGAGTGTCG
GGTAGATTCACCGTTGAAGGAGAATGATGGAACGAAAGACGCTTATATCT
CCTATTTGGTTACAACTACGACCGATTTCAAGTCCTTCCAGAAACCCGAG
TTCACCGTGCGACGCAGATTCACCGACTTCTACTTCCTATACAAGACACT
TTATCGCGAATACCCTGCCTGCGCCGTCCCGCCGCTGCCGGATAAGCATA
AGATGGAGTATGTCCGCGGCGATCGGTTCGGACCCGAATTCACTACCCGG
CGAGCATGGTCTTTACATCGCTTTTTGAAACGGCTTACGCTGCATCCCGT
GCTTCGTCGCGCACCGTTACTGGCCATCTTCCTGGAATCGCCCGACTGGA
ATGCACACATGCGGTTGCGGTCCACGCGCAACTCGACCAGCACCTCGGAC
GGCAGCGGGGTCCCTGGGATCTTTGACAACTTTACCGACACCTTTGTCAA
CGCTTTCACCAAGGTGCATAAGCCGGATAAGCGGTTTATTGAAGTGCGGG
AGAAGGCCGATAAACTGGACGAGGACCTCAATCATGTGGAGAAGATTGTA
GCCCGAGTGGCTCGGCGGGAATCGGATCTTGAGGCAGACTATAATGACCT
GGCTACGCAGTTCCGCAAACTTGTACCCCTGGAACCGGAGGTGGAGGTGC
CCCTACAAGTCTTTGCGGCCTCGGTAGAGGAGACGGGGCGCGGGCTCAAG
ACGCTCAAGGATCACACTGACCAGAATTATCTGGGGTCGCTGCGGGATAT
GGAGGCGTACATTGTCTCGCTTAAAGCCCTCCTCAAAACGCGCGAGCAGA
AACAGCTCGACTTCGAAGCGCTGGTTGACTATCGAAACAAGGCGGTGGCG
GAGCGGGACTCCCTCGCCTCTAACCCCTCGTCCTACTATGCCTCCAACCC
GCTGACCTCGTCCCCGGCCTCGTTCATCCGGTCCAAGATGGAGGACATGC
GGGGCGTCGACCACGAGCAGTCGCGACGCGAGAGGGTGCGGAAGTTGGAG
CTTCGCATTGACGAGCTCACGCGCGAGGTCGAATCGGCTAAAACGACGTC
GGAGATGTTCGACGAGGAAGTCGTGCGCGAGGTGGCAGACTTTGAGCGCA
TCAAGGCCGTAGAGTTCCGGGATACGCTGGGAGCGTTGGCCGAGAAGCAG
ATCGAGTTCTACCAGGGGGTACTGAATACCTGGGAACGATTTGTGGCTGA
GATGGAGGGAGATCTGGAAGAAGAGCATGACCCAGGCACGGAGGCCAGGT
GA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0035091phosphatidylinositol binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SNX4ATCC10864_002805Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002805-T1.exon1ATCC10864_002805-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_002805-T1.exon2ATCC10864_002805-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002805-T1.cdsATCC10864_002805-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002805-T1ATCC10864_002805-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR027267
PFAMPF09325
InterProIPR001683
PFAMPF00787
InterProIPR015404
InterProIPR036871
Properties
Property NameValue
NoteBUSCO:EOG09261PNZ
Productintercellular trafficking and secretion
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000053supercontigMCQH01000053:878531..880082 +
Powered by Drupal