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ATCC10864_002817-T1, ATCC10864_002817-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002817-T1
Unique NameATCC10864_002817-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000053:907835..908694+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002817-T1 ID=ATCC10864_002817-T1|Name=ATCC10864_002817-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=860bp|location=Sequence derived from alignment at MCQH01000053:907835..908694+ (Aspergillus niger ATCC 10864)
ATGGCCCAGGAAATCCAAAAAGAGAACAATGACCATTTGGTCCAGTCGTC
TGACCCCGAGCATCCCGCCAACTTGATCCCTGATCTCTGTCGCCGGTTCT
ACAATTGGGGCTGGGTCACCGGTACTGGTGGCGGGGTAAGCACTGTTGCA
CCTCCAGGACGATCATGAGTAATCGCTAATCGATTCCTATTTATTTCTGC
ATTAGACTTCCATTCGTCGCGATAATCATATATTCATTGCTCCTTCTGGC
GTGCAGAAGGAGATGATGAAATCCGACAACATCTTTGTCTTGGAATTCCC
TACGCCCAAGTATCCTCCGTCCGATCGCAAATATATTCGCAAGCCGCTCG
ACCTGAAGCCCTCGGCATGCACGCCACTGTTCCTTGCCGCTTTTGAGCGC
GGGGCTGGCTGCTGCATCCACACTCATTCTCAGTGGGCGGTCCTGGTGAC
CCTCCTGGTTGAGCGCGAGAAGGGCCCGAACGCCTGCTTCGAAATTAGCA
ACATTGAACAGATTAAGGGTATTCCCCGTGGAAAGGGCAAGGGCATGATG
GGTTTCTACGATACTCTTCGTATCCCGATTATTGATAACACCGCGTTTGA
GGAAGATCTCACGGGAAGCTTGGAGAAGGCGATGGAGGAGTACCCTGACA
CCTATGCTGTCCTTGTGCGGAGACACGGAATGTAAGTTTCATTTTTTTAA
CCCTTAACTTTCGAGTGACGGCGGGCTTATGTGTGTGTATAGTTATGTGT
GGGGAGACGACGTCGTCAAAGCCAAGACTCAGTGCGAGAGTCTAGACTAC
CTGTTCCAGCTTGCTGTTGAGATGCACAAGCTTGGCCTTCCGTGGGTGAA
AGAAACGTAG
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Coding sequence (CDS) from alignment at MCQH01000053:907835..908694+

>ATCC10864_002817-T1 ID=ATCC10864_002817-T1|Name=ATCC10864_002817-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2187bp|location=Sequence derived from alignment at MCQH01000053:907835..908694+ (Aspergillus niger ATCC 10864)
ATGGCCCAGGAAATCCAAAAAGAGAACAATGACCATTTGGTCCAGTCGTC
TGACCCCGAGCATCCCGCCAACTTGATCCCTGATCTCTGTCGCCGGTTCT
ACAATTGGGGCTGGGTCACCGGTACTGGTGGCGGGACTTCCATTCGTCGC
GATAATCATATATTCATTGCTCCTTCTGGCGTGCAGAAGGAGATGATGAA
ATCCGACAACATCTTTGTCTTGGAATTCCCTACGCCCAAGTATCCTCCGT
CCGATCGCAAATATATTCGCAAGCCGCTCGACCTGAAGCCCTCGGCATGC
ACGCCACTGTTCCTTGCCGCTTTTGAGCGCGGGGCTGGCTGCTGCATCCA
CACTCATTCTCAGTGGGCGGTCCTGGTGACCCTCCTGGTTGAGCGCGAGA
AGGGCCCGAACGCCTGCTTCGAAATTAGCAACATTGAACAGATTAAGGGT
ATTCCCCGTGGAAAGGGCAAGGGCATGATGGGTTTCTACGATACTCTTCG
TATCCCGATTATTGATAACACCGCGTTTGAGGAAGATCTCACGGGAAGCT
TGGAGAAGGCGATGGAGGAGTACCCTGACACCTATGCTGTCCTTGTGCGG
AGACACGGAATTTATGTGTGGGGAGACGACGTCGTCAAAGCCAAGACTCA
GTGCGAGAGTCTAGACTACCTGTTCCAGCTTGCTGTTGAGATGCACAAGC
TTGGCCTTCCGTGGGTGAAAGAAACGTAGATGGCCCAGGAAATCCAAAAA
GAGAACAATGACCATTTGGTCCAGTCGTCTGACCCCGAGCATCCCGCCAA
CTTGATCCCTGATCTCTGTCGCCGGTTCTACAATTGGGGCTGGGTCACCG
GTACTGGTGGCGGGACTTCCATTCGTCGCGATAATCATATATTCATTGCT
CCTTCTGGCGTGCAGAAGGAGATGATGAAATCCGACAACATCTTTGTCTT
GGAATTCCCTACGCCCAAGTATCCTCCGTCCGATCGCAAATATATTCGCA
AGCCGCTCGACCTGAAGCCCTCGGCATGCACGCCACTGTTCCTTGCCGCT
TTTGAGCGCGGGGCTGGCTGCTGCATCCACACTCATTCTCAGTGGGCGGT
CCTGGTGACCCTCCTGGTTGAGCGCGAGAAGGGCCCGAACGCCTGCTTCG
AAATTAGCAACATTGAACAGATTAAGGGTATTCCCCGTGGAAAGGGCAAG
GGCATGATGGGTTTCTACGATACTCTTCGTATCCCGATTATTGATAACAC
CGCGTTTGAGGAAGATCTCACGGGAAGCTTGGAGAAGGCGATGGAGGAGT
ACCCTGACACCTATGCTGTCCTTGTGCGGAGACACGGAATTTATGTGTGG
GGAGACGACGTCGTCAAAGCCAAGACTCAGTGCGAGAGTCTAGACTACCT
GTTCCAGCTTGCTGTTGAGATGCACAAGCTTGGCCTTCCGTGGGTGAAAG
AAACGTAGATGGCCCAGGAAATCCAAAAAGAGAACAATGACCATTTGGTC
CAGTCGTCTGACCCCGAGCATCCCGCCAACTTGATCCCTGATCTCTGTCG
CCGGTTCTACAATTGGGGCTGGGTCACCGGTACTGGTGGCGGGACTTCCA
TTCGTCGCGATAATCATATATTCATTGCTCCTTCTGGCGTGCAGAAGGAG
ATGATGAAATCCGACAACATCTTTGTCTTGGAATTCCCTACGCCCAAGTA
TCCTCCGTCCGATCGCAAATATATTCGCAAGCCGCTCGACCTGAAGCCCT
CGGCATGCACGCCACTGTTCCTTGCCGCTTTTGAGCGCGGGGCTGGCTGC
TGCATCCACACTCATTCTCAGTGGGCGGTCCTGGTGACCCTCCTGGTTGA
GCGCGAGAAGGGCCCGAACGCCTGCTTCGAAATTAGCAACATTGAACAGA
TTAAGGGTATTCCCCGTGGAAAGGGCAAGGGCATGATGGGTTTCTACGAT
ACTCTTCGTATCCCGATTATTGATAACACCGCGTTTGAGGAAGATCTCAC
GGGAAGCTTGGAGAAGGCGATGGAGGAGTACCCTGACACCTATGCTGTCC
TTGTGCGGAGACACGGAATTTATGTGTGGGGAGACGACGTCGTCAAAGCC
AAGACTCAGTGCGAGAGTCTAGACTACCTGTTCCAGCTTGCTGTTGAGAT
GCACAAGCTTGGCCTTCCGTGGGTGAAAGAAACGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Vocabulary: Biological Process
TermDefinition
GO:0019509L-methionine salvage from methylthioadenosine
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MDE1ATCC10864_002817Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002817-T1.exon1ATCC10864_002817-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_002817-T1.exon2ATCC10864_002817-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_002817-T1.exon3ATCC10864_002817-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002817-T1.cdsATCC10864_002817-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002817-T1ATCC10864_002817-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR027514
InterProIPR036409
PFAMPF00596
InterProIPR001303
InterProIPR017714
Properties
Property NameValue
ProductMethylthioribulose-1-phosphate dehydratase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000053supercontigMCQH01000053:907835..908694 +
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