You are here

Home

ATCC10864_002820-T1, ATCC10864_002820-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002820-T1
Unique NameATCC10864_002820-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000053:912567..913538+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002820-T1 ID=ATCC10864_002820-T1|Name=ATCC10864_002820-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=972bp|location=Sequence derived from alignment at MCQH01000053:912567..913538+ (Aspergillus niger ATCC 10864)
ATGAATTTGGAGGGCTCCGAGAGTCTTTCTGTTGCTTTCCTCTCCTCTGT
TCTTCTGCCCGTCTTTCCGTGAGCTGCGAGCTCCGTCCGCCGCGGGATAA
TAATGCTTCCTTATTCTAGATCTATACTTGCGGCCTGTCGGACGGTGGGC
CAGTTCACAGGTTAGCTGCGCGGTTTTCCATGCCTGCAAATTGCATTTGC
TAATCAATTGTTTTCATGTAAAGGGCAATATGTACCATCTATCGGACCAG
CTCTCCGGTTCGGTCAACTGCAATCCCGAACGGTCACCAAAGTCGCCGCA
GCCGCTAGGAACCCTCAATCTGACTCGAAAGGGGCTCGGCATGCAAATAA
TGATGTCGCCTCCTTATCCGATCAAGTCCGTCTCTTGATGAGACGAGTCC
CCTACCCTGTCGCCATCATCACGGCCACTGATCCCTATGGCCCGGCAGAT
AAGGCCTTCCGCGGAATGACCGTCTCCTCCTTCAACACCGTTACACTCAG
TCCGGAACCCGTCATATCGTTTAACGTGCGCCGGCCCTCCGAGACGCTTA
GCGCACTCCAATCGTCCAAGCGCTTCCTTGTGCACCTCCTGGCTCCTCGA
CAGGCAACCGCTACCCTTGCGCGGGACTTCTCCAAGGGCAACCACAATTT
GTCCCTCTTGGAGGGGAAGAGTGAATATGAGTTCGTTGCGCACGAACATT
CCCTTTCTGGTAATGAAACTTCCGGCAGGCCTCTTCCGCTGTTGCGGAGG
AAGCAGGATGCTACGTCTACAGGATCGGAGGACTTTCCGTTCGTATTGGA
GTGTCAGCTCCATCCACAGAGTATACAGGTCCAGGACCATACGATCGTCG
TGGGAACTGTTGTTCAGGCACTTTCAGGGGAGTTGTTGAGCCTTGACTCG
GAAACTAAGGCTGGAGACCTTTGCCTCACGTACGCCAATACCCACTTCTG
GGAAATGGGCCACGAGATATGA
back to top

Coding sequence (CDS) from alignment at MCQH01000053:912567..913538+

>ATCC10864_002820-T1 ID=ATCC10864_002820-T1|Name=ATCC10864_002820-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2574bp|location=Sequence derived from alignment at MCQH01000053:912567..913538+ (Aspergillus niger ATCC 10864)
ATGAATTTGGAGGGCTCCGAGAGTCTTTCTGTTGCTTTCCTCTCCTCTGT
TCTTCTGCCCGTCTTTCCATCTATACTTGCGGCCTGTCGGACGGTGGGCC
AGTTCACAGGGCAATATGTACCATCTATCGGACCAGCTCTCCGGTTCGGT
CAACTGCAATCCCGAACGGTCACCAAAGTCGCCGCAGCCGCTAGGAACCC
TCAATCTGACTCGAAAGGGGCTCGGCATGCAAATAATGATGTCGCCTCCT
TATCCGATCAAGTCCGTCTCTTGATGAGACGAGTCCCCTACCCTGTCGCC
ATCATCACGGCCACTGATCCCTATGGCCCGGCAGATAAGGCCTTCCGCGG
AATGACCGTCTCCTCCTTCAACACCGTTACACTCAGTCCGGAACCCGTCA
TATCGTTTAACGTGCGCCGGCCCTCCGAGACGCTTAGCGCACTCCAATCG
TCCAAGCGCTTCCTTGTGCACCTCCTGGCTCCTCGACAGGCAACCGCTAC
CCTTGCGCGGGACTTCTCCAAGGGCAACCACAATTTGTCCCTCTTGGAGG
GGAAGAGTGAATATGAGTTCGTTGCGCACGAACATTCCCTTTCTGGTAAT
GAAACTTCCGGCAGGCCTCTTCCGCTGTTGCGGAGGAAGCAGGATGCTAC
GTCTACAGGATCGGAGGACTTTCCGTTCGTATTGGAGTGTCAGCTCCATC
CACAGAGTATACAGGTCCAGGACCATACGATCGTCGTGGGAACTGTTGTT
CAGGCACTTTCAGGGGAGTTGTTGAGCCTTGACTCGGAAACTAAGGCTGG
AGACCTTTGCCTCACGTACGCCAATACCCACTTCTGGGAAATGGGCCACG
AGATATGAATGAATTTGGAGGGCTCCGAGAGTCTTTCTGTTGCTTTCCTC
TCCTCTGTTCTTCTGCCCGTCTTTCCATCTATACTTGCGGCCTGTCGGAC
GGTGGGCCAGTTCACAGGGCAATATGTACCATCTATCGGACCAGCTCTCC
GGTTCGGTCAACTGCAATCCCGAACGGTCACCAAAGTCGCCGCAGCCGCT
AGGAACCCTCAATCTGACTCGAAAGGGGCTCGGCATGCAAATAATGATGT
CGCCTCCTTATCCGATCAAGTCCGTCTCTTGATGAGACGAGTCCCCTACC
CTGTCGCCATCATCACGGCCACTGATCCCTATGGCCCGGCAGATAAGGCC
TTCCGCGGAATGACCGTCTCCTCCTTCAACACCGTTACACTCAGTCCGGA
ACCCGTCATATCGTTTAACGTGCGCCGGCCCTCCGAGACGCTTAGCGCAC
TCCAATCGTCCAAGCGCTTCCTTGTGCACCTCCTGGCTCCTCGACAGGCA
ACCGCTACCCTTGCGCGGGACTTCTCCAAGGGCAACCACAATTTGTCCCT
CTTGGAGGGGAAGAGTGAATATGAGTTCGTTGCGCACGAACATTCCCTTT
CTGGTAATGAAACTTCCGGCAGGCCTCTTCCGCTGTTGCGGAGGAAGCAG
GATGCTACGTCTACAGGATCGGAGGACTTTCCGTTCGTATTGGAGTGTCA
GCTCCATCCACAGAGTATACAGGTCCAGGACCATACGATCGTCGTGGGAA
CTGTTGTTCAGGCACTTTCAGGGGAGTTGTTGAGCCTTGACTCGGAAACT
AAGGCTGGAGACCTTTGCCTCACGTACGCCAATACCCACTTCTGGGAAAT
GGGCCACGAGATATGAATGAATTTGGAGGGCTCCGAGAGTCTTTCTGTTG
CTTTCCTCTCCTCTGTTCTTCTGCCCGTCTTTCCATCTATACTTGCGGCC
TGTCGGACGGTGGGCCAGTTCACAGGGCAATATGTACCATCTATCGGACC
AGCTCTCCGGTTCGGTCAACTGCAATCCCGAACGGTCACCAAAGTCGCCG
CAGCCGCTAGGAACCCTCAATCTGACTCGAAAGGGGCTCGGCATGCAAAT
AATGATGTCGCCTCCTTATCCGATCAAGTCCGTCTCTTGATGAGACGAGT
CCCCTACCCTGTCGCCATCATCACGGCCACTGATCCCTATGGCCCGGCAG
ATAAGGCCTTCCGCGGAATGACCGTCTCCTCCTTCAACACCGTTACACTC
AGTCCGGAACCCGTCATATCGTTTAACGTGCGCCGGCCCTCCGAGACGCT
TAGCGCACTCCAATCGTCCAAGCGCTTCCTTGTGCACCTCCTGGCTCCTC
GACAGGCAACCGCTACCCTTGCGCGGGACTTCTCCAAGGGCAACCACAAT
TTGTCCCTCTTGGAGGGGAAGAGTGAATATGAGTTCGTTGCGCACGAACA
TTCCCTTTCTGGTAATGAAACTTCCGGCAGGCCTCTTCCGCTGTTGCGGA
GGAAGCAGGATGCTACGTCTACAGGATCGGAGGACTTTCCGTTCGTATTG
GAGTGTCAGCTCCATCCACAGAGTATACAGGTCCAGGACCATACGATCGT
CGTGGGAACTGTTGTTCAGGCACTTTCAGGGGAGTTGTTGAGCCTTGACT
CGGAAACTAAGGCTGGAGACCTTTGCCTCACGTACGCCAATACCCACTTC
TGGGAAATGGGCCACGAGATATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0010181FMN binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002820ATCC10864_002820Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002820-T1.exon1ATCC10864_002820-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_002820-T1.exon2ATCC10864_002820-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_002820-T1.exon3ATCC10864_002820-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002820-T1.cdsATCC10864_002820-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002820-T1ATCC10864_002820-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF01613
InterProIPR012349
InterProIPR002563
Properties
Property NameValue
NoteSECRETED:SignalP(1-27)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000053supercontigMCQH01000053:912567..913538 +
Powered by Drupal