You are here

Home

ATCC10864_002918-T1, ATCC10864_002918-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002918-T1
Unique NameATCC10864_002918-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000054:195635..196728+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002918-T1 ID=ATCC10864_002918-T1|Name=ATCC10864_002918-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1094bp|location=Sequence derived from alignment at MCQH01000054:195635..196728+ (Aspergillus niger ATCC 10864)
ATGGGTGTCTTCATTGCTATTGCTGGAATGGAGATGTCATTGCAGTCATC
CAATCTCCATTCGCTGGCTCTACAAAGTTACCTATTTGCCATAACTAGCA
TCAAGACGGGTCTAATGGAGGGACGTCATACCGGTACTGAGGATTGGCTT
CTGGCCACCACCACCTTCTTGTGTCTTTTTGAAGTAGGTGCCTCCCTTCC
CATGCTAACCCCTTGCTGCTCTCAGTGCCCCAGCTAAACCTCCCATCAAA
GAACTCTCGCCGCGATGCGATGCCAAATGCCCTGTCTCATGTGTTGGCAT
CAGGCCAGATGTTGTCCCTTCGTAGGCCAAAGCCCCGAAACGCCTCGCAA
GAGGCCATTGTCTTCGAACGCATTTGTGTAGAATCATTTCTGTACCACGC
CGCTCTACTCACACTGTTTGATTCTTCAGTCAACTGCCTGCCTCTTATCC
AGGGGGGTTTAAATCTGGAGGGCTATTTTGCAGACCCGGATCACCCGAAC
GATGTCCCGCCAGGGACCTTAACGTCAACCCAGCCGATTCTAGATGCATC
CTATGAATTCTTTCTTTTGGTTCACGATGTTACAAAGCTCGCTCAATCGT
GTCCCCTGACCACCAGTACTGAATTTGACATGTGGTCTCGAGCACAAGAC
ATGGTTGTTCATTGGGAGAAGGCGATTGACAACCAACAGACGCCCATGTC
AGAGAATCACGTCGGACGACTCTATACTGTGGCGATCCGAATTCTACTTC
TACACGCAGATTCCAGGCGCTCCATGGTCGACTGCGTTCAATTGCTAGAA
TTATATCTTTTACGTGGCCTTGAAATCATAACAGCATTGGTTGTTGACGA
GTGGTTTTCGTTCTACTATCTGTGGCCGCTATTAGTGGTGGGCTCAGTAG
CCGTCCTACCGGGAGAGAAGCAGATCGTCCAAGCCAAGCTTTCTCAGGTT
TCAGGCTCACGGCAGGGAGGCCCCGTTAATCTGGCCCATTATCGCCTGCA
GAAAGTCTGGAGGTCAGGTGCTCGGTATAGTGACTCTGATCGTGGACAGG
TTGTTTCAAGGCAGCTTCGGACCTTGCTAAAAGAAGATCGATAG
back to top

Coding sequence (CDS) from alignment at MCQH01000054:195635..196728+

>ATCC10864_002918-T1 ID=ATCC10864_002918-T1|Name=ATCC10864_002918-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2052bp|location=Sequence derived from alignment at MCQH01000054:195635..196728+ (Aspergillus niger ATCC 10864)
ATGGGTGTCTTCATTGCTATTGCTGGAATGGAGATGTCATTGCAGTCATC
CAATCTCCATTCGCTGGCTCTACAAAGTTACCTATTTGCCATAACTAGCA
TCAAGACGGGTCTAATGGAGGGACGTCATACCGGTACTGAGGATTGGCTT
CTGGCCACCACCACCTTCTTGTGTCTTTTTGAAAACTCTCGCCGCGATGC
GATGCCAAATGCCCTGTCTCATGTGTTGGCATCAGGCCAGATGTTGTCCC
TTCGTAGGCCAAAGCCCCGAAACGCCTCGCAAGAGGCCATTGTCTTCGAA
CGCATTTGTGTAGAATCATTTCTGTACCACGCCGCTCTACTCACACTGTT
TGATTCTTCAGTCAACTGCCTGCCTCTTATCCAGGGGGGTTTAAATCTGG
AGGGCTATTTTGCAGACCCGGATCACCCGAACGATGTCCCGCCAGGGACC
TTAACGTCAACCCAGCCGATTCTAGATGCATCCTATGAATTCTTTCTTTT
GGTTCACGATGTTACAAAGCTCGCTCAATCGTGTCCCCTGACCACCAGTA
CTGAATTTGACATGTGGTCTCGAGCACAAGACATGGTTGTTCATTGGGAG
AAGGCGATTGACAACCAACAGACGCCCATGTCAGAGAATCACGTCGGACG
ACTCTATACTGTGGCGATCCGAATTCTACTTCTACACGCAGATTCCAGGC
GCTCCATGGTCGACTGCGTTCAATTGCTAGAATTATATCTTTTACGTGGC
CTTGAAATCATAACAGCATTGGTTGTTGACGAGTGGTTTTCGTTCTACTA
TCTGTGGCCGCTATTAGTGGTGGGCTCAGTAGCCGTCCTACCGGGAGAGA
AGCAGATCGTCCAAGCCAAGCTTTCTCAGGTTTCAGGCTCACGGCAGGGA
GGCCCCGTTAATCTGGCCCATTATCGCCTGCAGAAAGTCTGGAGGTCAGG
TGCTCGGTATAGTGACTCTGATCGTGGACAGGTTGTTTCAAGGCAGCTTC
GGACCTTGCTAAAAGAAGATCGATAGATGGGTGTCTTCATTGCTATTGCT
GGAATGGAGATGTCATTGCAGTCATCCAATCTCCATTCGCTGGCTCTACA
AAGTTACCTATTTGCCATAACTAGCATCAAGACGGGTCTAATGGAGGGAC
GTCATACCGGTACTGAGGATTGGCTTCTGGCCACCACCACCTTCTTGTGT
CTTTTTGAAAACTCTCGCCGCGATGCGATGCCAAATGCCCTGTCTCATGT
GTTGGCATCAGGCCAGATGTTGTCCCTTCGTAGGCCAAAGCCCCGAAACG
CCTCGCAAGAGGCCATTGTCTTCGAACGCATTTGTGTAGAATCATTTCTG
TACCACGCCGCTCTACTCACACTGTTTGATTCTTCAGTCAACTGCCTGCC
TCTTATCCAGGGGGGTTTAAATCTGGAGGGCTATTTTGCAGACCCGGATC
ACCCGAACGATGTCCCGCCAGGGACCTTAACGTCAACCCAGCCGATTCTA
GATGCATCCTATGAATTCTTTCTTTTGGTTCACGATGTTACAAAGCTCGC
TCAATCGTGTCCCCTGACCACCAGTACTGAATTTGACATGTGGTCTCGAG
CACAAGACATGGTTGTTCATTGGGAGAAGGCGATTGACAACCAACAGACG
CCCATGTCAGAGAATCACGTCGGACGACTCTATACTGTGGCGATCCGAAT
TCTACTTCTACACGCAGATTCCAGGCGCTCCATGGTCGACTGCGTTCAAT
TGCTAGAATTATATCTTTTACGTGGCCTTGAAATCATAACAGCATTGGTT
GTTGACGAGTGGTTTTCGTTCTACTATCTGTGGCCGCTATTAGTGGTGGG
CTCAGTAGCCGTCCTACCGGGAGAGAAGCAGATCGTCCAAGCCAAGCTTT
CTCAGGTTTCAGGCTCACGGCAGGGAGGCCCCGTTAATCTGGCCCATTAT
CGCCTGCAGAAAGTCTGGAGGTCAGGTGCTCGGTATAGTGACTCTGATCG
TGGACAGGTTGTTTCAAGGCAGCTTCGGACCTTGCTAAAAGAAGATCGAT
AG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002918ATCC10864_002918Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002918-T1.exon1ATCC10864_002918-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_002918-T1.exon2ATCC10864_002918-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002918-T1.cdsATCC10864_002918-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002918-T1ATCC10864_002918-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF11951
InterProIPR021858
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000054supercontigMCQH01000054:195635..196728 +
Powered by Drupal