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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000057:5149..7237- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_002954-T1 ID=ATCC10864_002954-T1|Name=ATCC10864_002954-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2089bp|location=Sequence derived from alignment at MCQH01000057:5149..7237- (Aspergillus niger ATCC 10864)
ATGGAGTCGTCACGCGGCCCTCCCAGGGTCAAGAACAAGGCTGCGGCGCC
CGTACAGATCTCAGCGGAGCAGCTGCTTCGCGAGGCCGTGGACCGGCAGG
AGCCCGCATTGCAGGCGCCGACGCAGCGCTTTGCCGACCTGGAAGAATTG
CACGAATACCAGGGCCGCAAGCGAAAAGAGTTCGAAGACTATGTGCGTCG
GAACCGAATTAACATGAACAACTGGATGCGCTATGCGGCATGGGAGCTGG
AGCAAAAGGAGTTCCGCCGGGCGCGTTCAATCTTTGAACGGGCGCTGGAC
GTCAGCCCGACCTCGGTGGTTCTGTGGATTCGGTACATCGAGTCGGAGAT
GCGGAATCGCAACATCAATCATGCCAGGAACTTGCTCGACCGTGCGGTGA
CGATCTTGCCTCGGGTGGATAAACTGTGGTACAAGTATGTCTACATGGAG
GAGACACTGGGCAACATTGCGGGTACACGACAGGTCTTTGAGCGGTGGAT
GTCTTGGGAGCCGGAAGAGGGAGCTTGGAGCGCCTATATCAAGCTGGAAA
AGCGGTACAATGAGTTCGAGAGGGCGCGCGCGATCTTCCAGCGGTTCACC
ATTGTTCACCCTGAACCACGCAATTGGATCAAGTGGGCTCGGTTTGAAGA
GGAGTATGGAACGAGCGATCTCGTGCGGGAGGTGTATGGAATGGCGATTG
AGACTCTGGGAGAGGATTTCATGGACGAGAAGCTCTTCATCGGCTATGCC
AAGTTCGAGGCGAAGTTGAAGGAGTACGAACGTGCCCGGGCGATTTACAA
GTATGCCTTAGACCGACTTCCTCGCTCAAAGTCCATGGCCCTTCACAAGT
CCTATACAACATTCGAGAAACAATATGGTGACCGGGAAGGCGTTGAGGAT
GTTATTCTCTCAAAACGCAGAGTCCAGTACGAGGAGCAACTGAAAGAGAA
CTCGCGGAACTACGACATATGGTTCGACTTTGCCCGGCTGGAGGAAACCT
CGGGTGACCCCGACCGAGTACGCGACATCTACGAACGCGCAATCGCTCAG
ATACCACCATCGCAGGAGAAGCGGCACTGGAGACGGTATATCTACCTGTG
GGTATTCTACGCCATTTGGGAGGAAATGGAAGCCAAGGACGCCGAGCGTG
CGCGCCAAATTTACAACGAGTGTCTCAAGTTGATTCCCCACAAAAAGTTC
ACCTTTGCCAAGATCTGGCTCCTGAAGGCGCAGTTTGAGATCCGTCAGAT
GAATCTCCAAGCCGCTCGTAAGACGCTTGGCCAGGCCATCGGCATGTGCC
CGAAGGATAAACTCTTCCGGGGATACATTGATCTAGAGCGCCAGCTGTTC
GAGTTCGTGCGGTGCCGGACACTGTTCGAAAAGCAGATCGAGTGGAATCC
TTCCAACAGCCAGTCATGGATCAAGTATGCCGAATTGGAGCGCGGGCTGG
ACGACACCGACCGTGCACGAGCCATCTACGAGCTTGGAATTGACCAGCCG
ACTCTCGATATGCCCGAGTTGGTGTGGAAGTCGTACATTGACTTTGAGGA
GTACGAAGGCGAATACGACCGGGTCCGCCAGCTCTACGAGCGTCTGCTGG
AGAAGACAGATCACGTCAAGGTGTGGATTAACTACGCCCGCTTCGAGATC
AACGTCTCCGACGAGGAAGAAGAGGAAGAGGAGGAGGAAGAGGAGCGGCC
GATCAGCGAGGATGCCAAGCGTCGTGCTCGGGCCGTTTTCGAACGAGCTC
ACAAGGTGTTCAAGGAGAAGGAGCTCAAGGAAGAGGTAAGCTGTACTCGA
CATTCCTTTTCTGACATATCCCTGACTAACCATGACACAGCGCGTGGAAT
TGCTCAATGCTTGGCGGTCATTCGAGCACACGCACGGTTCACCAGAAGAC
ATCGACAAGATCGAGAAACAGATGCCCCGGCGAGTCAAGAAGCGGCGCAA
GTTGGACGACGATCGGTACGAGGAGTACATGGATTACGTATTCCCAGCAG
ACGACCAGTCGGCGGCGAATCTGTCGAAGCTGTTGCAAAGAGCTCACCAA
TGGAAGCAGCAACAGCAACAACAGGGGGATGGAGCATAG back to topCoding sequence (CDS) from alignment at MCQH01000057:5149..7237- >ATCC10864_002954-T1 ID=ATCC10864_002954-T1|Name=ATCC10864_002954-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4068bp|location=Sequence derived from alignment at MCQH01000057:5149..7237- (Aspergillus niger ATCC 10864)
CGCGTGGAATTGCTCAATGCTTGGCGGTCATTCGAGCACACGCACGGTTC
ACCAGAAGACATCGACAAGATCGAGAAACAGATGCCCCGGCGAGTCAAGA
AGCGGCGCAAGTTGGACGACGATCGGTACGAGGAGTACATGGATTACGTA
TTCCCAGCAGACGACCAGTCGGCGGCGAATCTGTCGAAGCTGTTGCAAAG
AGCTCACCAATGGAAGCAGCAACAGCAACAACAGGGGGATGGAGCATAGA
TGGAGTCGTCACGCGGCCCTCCCAGGGTCAAGAACAAGGCTGCGGCGCCC
GTACAGATCTCAGCGGAGCAGCTGCTTCGCGAGGCCGTGGACCGGCAGGA
GCCCGCATTGCAGGCGCCGACGCAGCGCTTTGCCGACCTGGAAGAATTGC
ACGAATACCAGGGCCGCAAGCGAAAAGAGTTCGAAGACTATGTGCGTCGG
AACCGAATTAACATGAACAACTGGATGCGCTATGCGGCATGGGAGCTGGA
GCAAAAGGAGTTCCGCCGGGCGCGTTCAATCTTTGAACGGGCGCTGGACG
TCAGCCCGACCTCGGTGGTTCTGTGGATTCGGTACATCGAGTCGGAGATG
CGGAATCGCAACATCAATCATGCCAGGAACTTGCTCGACCGTGCGGTGAC
GATCTTGCCTCGGGTGGATAAACTGTGGTACAAGTATGTCTACATGGAGG
AGACACTGGGCAACATTGCGGGTACACGACAGGTCTTTGAGCGGTGGATG
TCTTGGGAGCCGGAAGAGGGAGCTTGGAGCGCCTATATCAAGCTGGAAAA
GCGGTACAATGAGTTCGAGAGGGCGCGCGCGATCTTCCAGCGGTTCACCA
TTGTTCACCCTGAACCACGCAATTGGATCAAGTGGGCTCGGTTTGAAGAG
GAGTATGGAACGAGCGATCTCGTGCGGGAGGTGTATGGAATGGCGATTGA
GACTCTGGGAGAGGATTTCATGGACGAGAAGCTCTTCATCGGCTATGCCA
AGTTCGAGGCGAAGTTGAAGGAGTACGAACGTGCCCGGGCGATTTACAAG
TATGCCTTAGACCGACTTCCTCGCTCAAAGTCCATGGCCCTTCACAAGTC
CTATACAACATTCGAGAAACAATATGGTGACCGGGAAGGCGTTGAGGATG
TTATTCTCTCAAAACGCAGAGTCCAGTACGAGGAGCAACTGAAAGAGAAC
TCGCGGAACTACGACATATGGTTCGACTTTGCCCGGCTGGAGGAAACCTC
GGGTGACCCCGACCGAGTACGCGACATCTACGAACGCGCAATCGCTCAGA
TACCACCATCGCAGGAGAAGCGGCACTGGAGACGGTATATCTACCTGTGG
GTATTCTACGCCATTTGGGAGGAAATGGAAGCCAAGGACGCCGAGCGTGC
GCGCCAAATTTACAACGAGTGTCTCAAGTTGATTCCCCACAAAAAGTTCA
CCTTTGCCAAGATCTGGCTCCTGAAGGCGCAGTTTGAGATCCGTCAGATG
AATCTCCAAGCCGCTCGTAAGACGCTTGGCCAGGCCATCGGCATGTGCCC
GAAGGATAAACTCTTCCGGGGATACATTGATCTAGAGCGCCAGCTGTTCG
AGTTCGTGCGGTGCCGGACACTGTTCGAAAAGCAGATCGAGTGGAATCCT
TCCAACAGCCAGTCATGGATCAAGTATGCCGAATTGGAGCGCGGGCTGGA
CGACACCGACCGTGCACGAGCCATCTACGAGCTTGGAATTGACCAGCCGA
CTCTCGATATGCCCGAGTTGGTGTGGAAGTCGTACATTGACTTTGAGGAG
TACGAAGGCGAATACGACCGGGTCCGCCAGCTCTACGAGCGTCTGCTGGA
GAAGACAGATCACGTCAAGGTGTGGATTAACTACGCCCGCTTCGAGATCA
ACGTCTCCGACGAGGAAGAAGAGGAAGAGGAGGAGGAAGAGGAGCGGCCG
ATCAGCGAGGATGCCAAGCGTCGTGCTCGGGCCGTTTTCGAACGAGCTCA
CAAGGTGTTCAAGGAGAAGGAGCTCAAGGAAGAGCGCGTGGAATTGCTCA
ATGCTTGGCGGTCATTCGAGCACACGCACGGTTCACCAGAAGACATCGAC
AAGATCGAGAAACAGATGCCCCGGCGAGTCAAGAAGCGGCGCAAGTTGGA
CGACGATCGGTACGAGGAGTACATGGATTACGTATTCCCAGCAGACGACC
AGTCGGCGGCGAATCTGTCGAAGCTGTTGCAAAGAGCTCACCAATGGAAG
CAGCAACAGCAACAACAGGGGGATGGAGCATAGATGGAGTCGTCACGCGG
CCCTCCCAGGGTCAAGAACAAGGCTGCGGCGCCCGTACAGATCTCAGCGG
AGCAGCTGCTTCGCGAGGCCGTGGACCGGCAGGAGCCCGCATTGCAGGCG
CCGACGCAGCGCTTTGCCGACCTGGAAGAATTGCACGAATACCAGGGCCG
CAAGCGAAAAGAGTTCGAAGACTATGTGCGTCGGAACCGAATTAACATGA
ACAACTGGATGCGCTATGCGGCATGGGAGCTGGAGCAAAAGGAGTTCCGC
CGGGCGCGTTCAATCTTTGAACGGGCGCTGGACGTCAGCCCGACCTCGGT
GGTTCTGTGGATTCGGTACATCGAGTCGGAGATGCGGAATCGCAACATCA
ATCATGCCAGGAACTTGCTCGACCGTGCGGTGACGATCTTGCCTCGGGTG
GATAAACTGTGGTACAAGTATGTCTACATGGAGGAGACACTGGGCAACAT
TGCGGGTACACGACAGGTCTTTGAGCGGTGGATGTCTTGGGAGCCGGAAG
AGGGAGCTTGGAGCGCCTATATCAAGCTGGAAAAGCGGTACAATGAGTTC
GAGAGGGCGCGCGCGATCTTCCAGCGGTTCACCATTGTTCACCCTGAACC
ACGCAATTGGATCAAGTGGGCTCGGTTTGAAGAGGAGTATGGAACGAGCG
ATCTCGTGCGGGAGGTGTATGGAATGGCGATTGAGACTCTGGGAGAGGAT
TTCATGGACGAGAAGCTCTTCATCGGCTATGCCAAGTTCGAGGCGAAGTT
GAAGGAGTACGAACGTGCCCGGGCGATTTACAAGTATGCCTTAGACCGAC
TTCCTCGCTCAAAGTCCATGGCCCTTCACAAGTCCTATACAACATTCGAG
AAACAATATGGTGACCGGGAAGGCGTTGAGGATGTTATTCTCTCAAAACG
CAGAGTCCAGTACGAGGAGCAACTGAAAGAGAACTCGCGGAACTACGACA
TATGGTTCGACTTTGCCCGGCTGGAGGAAACCTCGGGTGACCCCGACCGA
GTACGCGACATCTACGAACGCGCAATCGCTCAGATACCACCATCGCAGGA
GAAGCGGCACTGGAGACGGTATATCTACCTGTGGGTATTCTACGCCATTT
GGGAGGAAATGGAAGCCAAGGACGCCGAGCGTGCGCGCCAAATTTACAAC
GAGTGTCTCAAGTTGATTCCCCACAAAAAGTTCACCTTTGCCAAGATCTG
GCTCCTGAAGGCGCAGTTTGAGATCCGTCAGATGAATCTCCAAGCCGCTC
GTAAGACGCTTGGCCAGGCCATCGGCATGTGCCCGAAGGATAAACTCTTC
CGGGGATACATTGATCTAGAGCGCCAGCTGTTCGAGTTCGTGCGGTGCCG
GACACTGTTCGAAAAGCAGATCGAGTGGAATCCTTCCAACAGCCAGTCAT
GGATCAAGTATGCCGAATTGGAGCGCGGGCTGGACGACACCGACCGTGCA
CGAGCCATCTACGAGCTTGGAATTGACCAGCCGACTCTCGATATGCCCGA
GTTGGTGTGGAAGTCGTACATTGACTTTGAGGAGTACGAAGGCGAATACG
ACCGGGTCCGCCAGCTCTACGAGCGTCTGCTGGAGAAGACAGATCACGTC
AAGGTGTGGATTAACTACGCCCGCTTCGAGATCAACGTCTCCGACGAGGA
AGAAGAGGAAGAGGAGGAGGAAGAGGAGCGGCCGATCAGCGAGGATGCCA
AGCGTCGTGCTCGGGCCGTTTTCGAACGAGCTCACAAGGTGTTCAAGGAG
AAGGAGCTCAAGGAAGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006396 | RNA processing |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| PFAM | PF02184 |
| InterPro | IPR019734 |
| PFAM | PF13428 |
| InterPro | IPR013026 |
| InterPro | IPR011990 |
| InterPro | IPR003107 |
Properties
| Property Name | Value |
|---|
| Product | NineTeen Complex (NTC) component |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000057 | supercontig | MCQH01000057:5149..7237 - |
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