You are here

Home

ATCC10864_002986-T1, ATCC10864_002986-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002986-T1
Unique NameATCC10864_002986-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000058:69827..71989-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002986-T1 ID=ATCC10864_002986-T1|Name=ATCC10864_002986-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2163bp|location=Sequence derived from alignment at MCQH01000058:69827..71989- (Aspergillus niger ATCC 10864)
ATGGCTTTTCGGGCTCGCTCCGTCGCCCTTCTTCGTTGGGGGTTGGAGCC
GAGATCATCCCAGCTGAGTGTGCTGGGTAGGAGACGTGGGTTGGCGACAG
TGTCAGATGGGACGCGGTATGTTTTTCCATCCTGTACGTGGTTTTCTTTG
GTGGTTAGGTGCTAATTCTGGTTTGTTCACAGGGCATATGATGTGGTGGT
CATTGGAGGAGGCCATGCTGGCTCCGAAGCCTGTGCCGCGGCTGCTCGTT
CAGGCGCCCGAACCGCATTAATCACGCCCTCGCTATCCAACATCGGTGTC
TGTTCGTGTAATCCGAGTTTCGGTGGAATCGGAAAGGGTACCATGATACG
AGAAGTTGATGCGATGGACGGAGTCGCGGGACGAATTATTGATAAGGCCG
GTATTATGTTTCGCACGCTGAACCGATCCAAGGGCCCAGCTGTTTGGGGT
CCCCGTGCTCAGATTGATCGCGATCTGTATAAGAAGTATATGCAGGAGGA
GTTGCAGGGGACGGAAGGATTGAGCATCGTCGAGGGTAAGGTTGCGGATA
TCGTGGTGTCGAAGGATGGGGTCGAGCATACTCCCGGGGCGCAGGGCAAG
ATTGTTGGTGTTAGGCTGGAGTCTGGCGAGGTTATACCCACTGGCAAGGT
GGTTATCACAACGGGCACGTTCTTGGGTGGGGAGATTCATATTGGGCTTG
AAGCATACCCGTCTGGTCGGATGGGTGAAGCTGCTACCTTCGGACTCAGT
AAGTCCTTGCGGGATGCCGGGTTCACGTTGGGTCGTTTGAAGACGGGCAC
ACCTCCGCGGTTGGATAGAAAGACGATCAATTTTGCGCCTCTGGAAGTTC
AGGAGGGTGATCACCCCCCGAGTCCGTTCTCCTATCTCAATGACAGGGTT
CAGGTCGACGATGAGGCCCAGCTTACTTGCTGGATGACCTACACTAATGA
CGATGTTCACGATATTGTCCGAGCGAACCTGGACAAGACCATTCACATCC
GCGAGACCGTTAGGGGCCCCAGATACTGTCCTTCGCTCGAGTCTAAGATC
ATCCGCTTCACCGATAAGAAGCGCCATCTGATCTGGCTCGAGCCAGAGGG
TTTCGCGCCAAACGACGTCATCTACCCTAACGGTATCTCCATGACCATTC
CCGCCGATGCCCAGTACGCCATGCTGCGAAAGGTCCACGGTCTCGAGAAC
GTGACCATGCTTCAACCCGGCTACGGAGTCGAGTACGACTACATCGACCC
GCGCAATCTCCGACCCACGCTCGAAACCAAACTCATCAGCGGTCTCTACC
TTGCCGGTCAGATCAACGGTACCACCGGCTACGAAGAAGCCGCTGGACAA
GGTATCATCGCTGGTACCAACGCTGGATTATCCGCCCAAGGTCGGGAACC
GCTCACTCTCCGCCGGTCCGACGCATTCATCGGCATCATGATCGACGACC
TCATCACAAAGGGCGTCTCCGAGCCCTACCGCATGTTCACAACGCGAAGC
GAATACCGCATTACCACTCGCTCCGACAACGCCGATCTCCGTCTCACCCG
GATGGCCCGCGAAGCCGGAATCGTCTCCGACAAGCGCTGGCGACACTTCA
CGGAAACGGAAGCGCAAATCAACGAGCTTCAAACCCTCCTCGAGAACACC
AAAATGTCCTCCTACGCCTGGGCTCGCAAAGGCTTCAAGGCCCGCATCGA
CCCCTCTCAACGCTCCGCTCTCGACCTCCTCTGTCTCCGCGAGAGCGATA
TTGACTCCCTCATCCCACATATTGAGTCCCCCACCGGCACCGTCTACTCT
GCCTCTTCCTTCCCTCCGGAGATCCGTAACCGTGTCTCCATTGAAGGCCG
CTACGCTCCCTTTGTGATCCGCCAGGAAAACGCAGCCAAGAAATCCCTCC
GCGACGAAAATTTGTCTATCCCTGCTGACTTGGACTATGCTACTGTTCAG
GGCATCAGCATCGAGGAAAAGCAGGCCCTGGAGCGCGTCCGTCCCGTCAG
TATCGGCATGGCGAGGCGCATCGAGGGCGTTACTCCGTCCGGTGTCCTGA
GGGTGCTCATGCATGTGCATAGGACCAGTAGGGATAGGACTGCTGCTTCT
GCTCCTCCTGCTTCGGAGGGGCTTGAGGAGACCCCTGATGATGTTATCAG
CCAGGCACCTTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000058:69827..71989-

>ATCC10864_002986-T1 ID=ATCC10864_002986-T1|Name=ATCC10864_002986-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4194bp|location=Sequence derived from alignment at MCQH01000058:69827..71989- (Aspergillus niger ATCC 10864)
GGCATATGATGTGGTGGTCATTGGAGGAGGCCATGCTGGCTCCGAAGCCT
GTGCCGCGGCTGCTCGTTCAGGCGCCCGAACCGCATTAATCACGCCCTCG
CTATCCAACATCGGTGTCTGTTCGTGTAATCCGAGTTTCGGTGGAATCGG
AAAGGGTACCATGATACGAGAAGTTGATGCGATGGACGGAGTCGCGGGAC
GAATTATTGATAAGGCCGGTATTATGTTTCGCACGCTGAACCGATCCAAG
GGCCCAGCTGTTTGGGGTCCCCGTGCTCAGATTGATCGCGATCTGTATAA
GAAGTATATGCAGGAGGAGTTGCAGGGGACGGAAGGATTGAGCATCGTCG
AGGGTAAGGTTGCGGATATCGTGGTGTCGAAGGATGGGGTCGAGCATACT
CCCGGGGCGCAGGGCAAGATTGTTGGTGTTAGGCTGGAGTCTGGCGAGGT
TATACCCACTGGCAAGGTGGTTATCACAACGGGCACGTTCTTGGGTGGGG
AGATTCATATTGGGCTTGAAGCATACCCGTCTGGTCGGATGGGTGAAGCT
GCTACCTTCGGACTCAGTAAGTCCTTGCGGGATGCCGGGTTCACGTTGGG
TCGTTTGAAGACGGGCACACCTCCGCGGTTGGATAGAAAGACGATCAATT
TTGCGCCTCTGGAAGTTCAGGAGGGTGATCACCCCCCGAGTCCGTTCTCC
TATCTCAATGACAGGGTTCAGGTCGACGATGAGGCCCAGCTTACTTGCTG
GATGACCTACACTAATGACGATGTTCACGATATTGTCCGAGCGAACCTGG
ACAAGACCATTCACATCCGCGAGACCGTTAGGGGCCCCAGATACTGTCCT
TCGCTCGAGTCTAAGATCATCCGCTTCACCGATAAGAAGCGCCATCTGAT
CTGGCTCGAGCCAGAGGGTTTCGCGCCAAACGACGTCATCTACCCTAACG
GTATCTCCATGACCATTCCCGCCGATGCCCAGTACGCCATGCTGCGAAAG
GTCCACGGTCTCGAGAACGTGACCATGCTTCAACCCGGCTACGGAGTCGA
GTACGACTACATCGACCCGCGCAATCTCCGACCCACGCTCGAAACCAAAC
TCATCAGCGGTCTCTACCTTGCCGGTCAGATCAACGGTACCACCGGCTAC
GAAGAAGCCGCTGGACAAGGTATCATCGCTGGTACCAACGCTGGATTATC
CGCCCAAGGTCGGGAACCGCTCACTCTCCGCCGGTCCGACGCATTCATCG
GCATCATGATCGACGACCTCATCACAAAGGGCGTCTCCGAGCCCTACCGC
ATGTTCACAACGCGAAGCGAATACCGCATTACCACTCGCTCCGACAACGC
CGATCTCCGTCTCACCCGGATGGCCCGCGAAGCCGGAATCGTCTCCGACA
AGCGCTGGCGACACTTCACGGAAACGGAAGCGCAAATCAACGAGCTTCAA
ACCCTCCTCGAGAACACCAAAATGTCCTCCTACGCCTGGGCTCGCAAAGG
CTTCAAGGCCCGCATCGACCCCTCTCAACGCTCCGCTCTCGACCTCCTCT
GTCTCCGCGAGAGCGATATTGACTCCCTCATCCCACATATTGAGTCCCCC
ACCGGCACCGTCTACTCTGCCTCTTCCTTCCCTCCGGAGATCCGTAACCG
TGTCTCCATTGAAGGCCGCTACGCTCCCTTTGTGATCCGCCAGGAAAACG
CAGCCAAGAAATCCCTCCGCGACGAAAATTTGTCTATCCCTGCTGACTTG
GACTATGCTACTGTTCAGGGCATCAGCATCGAGGAAAAGCAGGCCCTGGA
GCGCGTCCGTCCCGTCAGTATCGGCATGGCGAGGCGCATCGAGGGCGTTA
CTCCGTCCGGTGTCCTGAGGGTGCTCATGCATGTGCATAGGACCAGTAGG
GATAGGACTGCTGCTTCTGCTCCTCCTGCTTCGGAGGGGCTTGAGGAGAC
CCCTGATGATGTTATCAGCCAGGCACCTTGAATGGCTTTTCGGGCTCGCT
CCGTCGCCCTTCTTCGTTGGGGGTTGGAGCCGAGATCATCCCAGCTGAGT
GTGCTGGGTAGGAGACGTGGGTTGGCGACAGTGTCAGATGGGACGCGGGC
ATATGATGTGGTGGTCATTGGAGGAGGCCATGCTGGCTCCGAAGCCTGTG
CCGCGGCTGCTCGTTCAGGCGCCCGAACCGCATTAATCACGCCCTCGCTA
TCCAACATCGGTGTCTGTTCGTGTAATCCGAGTTTCGGTGGAATCGGAAA
GGGTACCATGATACGAGAAGTTGATGCGATGGACGGAGTCGCGGGACGAA
TTATTGATAAGGCCGGTATTATGTTTCGCACGCTGAACCGATCCAAGGGC
CCAGCTGTTTGGGGTCCCCGTGCTCAGATTGATCGCGATCTGTATAAGAA
GTATATGCAGGAGGAGTTGCAGGGGACGGAAGGATTGAGCATCGTCGAGG
GTAAGGTTGCGGATATCGTGGTGTCGAAGGATGGGGTCGAGCATACTCCC
GGGGCGCAGGGCAAGATTGTTGGTGTTAGGCTGGAGTCTGGCGAGGTTAT
ACCCACTGGCAAGGTGGTTATCACAACGGGCACGTTCTTGGGTGGGGAGA
TTCATATTGGGCTTGAAGCATACCCGTCTGGTCGGATGGGTGAAGCTGCT
ACCTTCGGACTCAGTAAGTCCTTGCGGGATGCCGGGTTCACGTTGGGTCG
TTTGAAGACGGGCACACCTCCGCGGTTGGATAGAAAGACGATCAATTTTG
CGCCTCTGGAAGTTCAGGAGGGTGATCACCCCCCGAGTCCGTTCTCCTAT
CTCAATGACAGGGTTCAGGTCGACGATGAGGCCCAGCTTACTTGCTGGAT
GACCTACACTAATGACGATGTTCACGATATTGTCCGAGCGAACCTGGACA
AGACCATTCACATCCGCGAGACCGTTAGGGGCCCCAGATACTGTCCTTCG
CTCGAGTCTAAGATCATCCGCTTCACCGATAAGAAGCGCCATCTGATCTG
GCTCGAGCCAGAGGGTTTCGCGCCAAACGACGTCATCTACCCTAACGGTA
TCTCCATGACCATTCCCGCCGATGCCCAGTACGCCATGCTGCGAAAGGTC
CACGGTCTCGAGAACGTGACCATGCTTCAACCCGGCTACGGAGTCGAGTA
CGACTACATCGACCCGCGCAATCTCCGACCCACGCTCGAAACCAAACTCA
TCAGCGGTCTCTACCTTGCCGGTCAGATCAACGGTACCACCGGCTACGAA
GAAGCCGCTGGACAAGGTATCATCGCTGGTACCAACGCTGGATTATCCGC
CCAAGGTCGGGAACCGCTCACTCTCCGCCGGTCCGACGCATTCATCGGCA
TCATGATCGACGACCTCATCACAAAGGGCGTCTCCGAGCCCTACCGCATG
TTCACAACGCGAAGCGAATACCGCATTACCACTCGCTCCGACAACGCCGA
TCTCCGTCTCACCCGGATGGCCCGCGAAGCCGGAATCGTCTCCGACAAGC
GCTGGCGACACTTCACGGAAACGGAAGCGCAAATCAACGAGCTTCAAACC
CTCCTCGAGAACACCAAAATGTCCTCCTACGCCTGGGCTCGCAAAGGCTT
CAAGGCCCGCATCGACCCCTCTCAACGCTCCGCTCTCGACCTCCTCTGTC
TCCGCGAGAGCGATATTGACTCCCTCATCCCACATATTGAGTCCCCCACC
GGCACCGTCTACTCTGCCTCTTCCTTCCCTCCGGAGATCCGTAACCGTGT
CTCCATTGAAGGCCGCTACGCTCCCTTTGTGATCCGCCAGGAAAACGCAG
CCAAGAAATCCCTCCGCGACGAAAATTTGTCTATCCCTGCTGACTTGGAC
TATGCTACTGTTCAGGGCATCAGCATCGAGGAAAAGCAGGCCCTGGAGCG
CGTCCGTCCCGTCAGTATCGGCATGGCGAGGCGCATCGAGGGCGTTACTC
CGTCCGGTGTCCTGAGGGTGCTCATGCATGTGCATAGGACCAGTAGGGAT
AGGACTGCTGCTTCTGCTCCTCCTGCTTCGGAGGGGCTTGAGGAGACCCC
TGATGATGTTATCAGCCAGGCACCTTGAATGGCTTTTCGGGCTCGCTCCG
TCGCCCTTCTTCGTTGGGGGTTGGAGCCGAGATCATCCCAGCTGAGTGTG
CTGGGTAGGAGACGTGGGTTGGCGACAGTGTCAGATGGGACGCG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0050660flavin adenine dinucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0002098tRNA wobble uridine modification
GO:0008033tRNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002986ATCC10864_002986Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002986-T1ATCC10864_002986-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002986-T1.cdsATCC10864_002986-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002986-T1.exon2ATCC10864_002986-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_002986-T1.exon1ATCC10864_002986-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR020595
PFAMPF01134
InterProIPR004416
InterProIPR036188
InterProIPR026904
InterProIPR040131
PFAMPF13932
InterProIPR002218
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000058supercontigMCQH01000058:69827..71989 -
Powered by Drupal