You are here

Home

ATCC10864_003161-T1, ATCC10864_003161-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003161-T1
Unique NameATCC10864_003161-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000066:247547..248963-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003161-T1 ID=ATCC10864_003161-T1|Name=ATCC10864_003161-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1417bp|location=Sequence derived from alignment at MCQH01000066:247547..248963- (Aspergillus niger ATCC 10864)
ATGAGCGGACAAGATCCCAATAGCCAGTCCGAAATCACCAAGCATGATAC
GGGTTGGCGGAGAGTAGTTCGCCATTTCACTCCATCGTACGCAGCACTCG
AACATGTCGCAAGTGGAAATAACTAACATGTCTGCACAGTTGGTTTTCGG
TTACCATGGGCACAGGCATTGTGTCTATTCTACTCAATACTCTTCCGTAC
AATGGCCAGTGGCTATACTGGATCTCTGTTGTCTGTTTTGCTTTTAATGT
CCTCCTTTTTGCCATAGGGTGTATCATCACCTTCCTTCGCTATACCCTAT
ATCCGGAAATCTTCTTCGCCATGATCAAGCATCCAGTCCAGTCCATGTTC
ATAGGAACATTTCCGATGGGATTCGCGACTATCATCAACATGTTCTGTTT
TGTCTGTGTTCCAGCCTGGGGTGACTGGACGCGCAATTTTGCCTGGGGCT
TGTGGATCTTTGATGCAATCTTTTCAGTCATCACTGCCCTCTCTCTGCCC
TTCTTACTGTGCGTCTGGCCCTGCACGGAGACTATGAAGCAATCATAAGC
TCGACTAACATGACTGCAGAATGGCCCATGGAAGTGAAATGCAACTCTCA
TCCATGACAGCTGTCTGGCTTCTTCCCATCGTCAGCTGCATTGTTGCAGC
TTCGTCAGGGGCCATCGTAGCGGATGTCCTCCCCGATCCACAGCACGCTC
TCTGGACCGTGCTCGTGAGCTACGTTCTCTGGGGCATCGGATTACCTCTT
GCACTAATGGTAATGGTGATCTACCTACAGCGACTGACCCTGCACAAATT
GCCTCCTAAAGCGGTGATTGTGAGCGTGTTCCTCCCACTGGGACCACTTG
GTCAGGGCGGCTTCGGGTGAGTCTATGCCTTCCTTCGCTATGTGATCATC
GCATATTAAGTAGTATACTACTAGTATAATGAAACTGGGCCAAGCAGCGC
AGGAAATCTTCCCCAAAACACAGACCCTCGAGGCTGCATCTGGTCCGATC
TTCTATACCATGGGGTTCATGATCGCTCTGATTCTCTGGTCCTTTGGACT
CGTCTGGCTATTTTTTGCCTTGGCATCTATTGCGAGGAGCAAGAGTTTCC
CATTCAATATTGGATGGTGGGGATTCACGTTCCCTTTGGGAGTGTACGCC
ACGAGCACGTGCCAGATGGGCAAGGAGCTGCCGTCGGAGTTTTTTCGGGT
GTTGGGAACGGTAGGTTTGACCTCTTTTAAGCTTTTTGTGATGTTTCCTG
ATGTTGATGTACGACAGATCCTCTCGCTTTGTGTGGTGGTTCTATGGATT
GTGGTCAGTATTGGGACATTGCGGGGAGTCGTGTCAGGCCGGTTGTTCTT
TGCGCCATGTTTGGGGGACTTGAAGGCACGGGACAACGAGAATAAAGATG
GGACAAAGGCAGCCTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000066:247547..248963-

>ATCC10864_003161-T1 ID=ATCC10864_003161-T1|Name=ATCC10864_003161-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5940bp|location=Sequence derived from alignment at MCQH01000066:247547..248963- (Aspergillus niger ATCC 10864)
ATCCTCTCGCTTTGTGTGGTGGTTCTATGGATTGTGGTCAGTATTGGGAC
ATTGCGGGGAGTCGTGTCAGGCCGGTTGTTCTTTGCGCCATGTTTGGGGG
ACTTGAAGGCACGGGACAACGAGAATAAAGATGGGACAAAGGCAGCCTGA
TATAATGAAACTGGGCCAAGCAGCGCAGGAAATCTTCCCCAAAACACAGA
CCCTCGAGGCTGCATCTGGTCCGATCTTCTATACCATGGGGTTCATGATC
GCTCTGATTCTCTGGTCCTTTGGACTCGTCTGGCTATTTTTTGCCTTGGC
ATCTATTGCGAGGAGCAAGAGTTTCCCATTCAATATTGGATGGTGGGGAT
TCACGTTCCCTTTGGGAGTGTACGCCACGAGCACGTGCCAGATGGGCAAG
GAGCTGCCGTCGGAGTTTTTTCGGGTGTTGGGAACGAATGGCCCATGGAA
GTGAAATGCAACTCTCATCCATGACAGCTGTCTGGCTTCTTCCCATCGTC
AGCTGCATTGTTGCAGCTTCGTCAGGGGCCATCGTAGCGGATGTCCTCCC
CGATCCACAGCACGCTCTCTGGACCGTGCTCGTGAGCTACGTTCTCTGGG
GCATCGGATTACCTCTTGCACTAATGGTAATGGTGATCTACCTACAGCGA
CTGACCCTGCACAAATTGCCTCCTAAAGCGGTGATTGTGAGCGTGTTCCT
CCCACTGGGACCACTTGGTCAGGGCGGCTTCGGTTGGTTTTCGGTTACCA
TGGGCACAGGCATTGTGTCTATTCTACTCAATACTCTTCCGTACAATGGC
CAGTGGCTATACTGGATCTCTGTTGTCTGTTTTGCTTTTAATGTCCTCCT
TTTTGCCATAGGGTGTATCATCACCTTCCTTCGCTATACCCTATATCCGG
AAATCTTCTTCGCCATGATCAAGCATCCAGTCCAGTCCATGTTCATAGGA
ACATTTCCGATGGGATTCGCGACTATCATCAACATGTTCTGTTTTGTCTG
TGTTCCAGCCTGGGGTGACTGGACGCGCAATTTTGCCTGGGGCTTGTGGA
TCTTTGATGCAATCTTTTCAGTCATCACTGCCCTCTCTCTGCCCTTCTTA
CTATGAGCGGACAAGATCCCAATAGCCAGTCCGAAATCACCAAGCATGAT
ACGGGTTGGCGGAGAGTAGTTCGCCATTTCACTCCATCATCCTCTCGCTT
TGTGTGGTGGTTCTATGGATTGTGGTCAGTATTGGGACATTGCGGGGAGT
CGTGTCAGGCCGGTTGTTCTTTGCGCCATGTTTGGGGGACTTGAAGGCAC
GGGACAACGAGAATAAAGATGGGACAAAGGCAGCCTGATATAATGAAACT
GGGCCAAGCAGCGCAGGAAATCTTCCCCAAAACACAGACCCTCGAGGCTG
CATCTGGTCCGATCTTCTATACCATGGGGTTCATGATCGCTCTGATTCTC
TGGTCCTTTGGACTCGTCTGGCTATTTTTTGCCTTGGCATCTATTGCGAG
GAGCAAGAGTTTCCCATTCAATATTGGATGGTGGGGATTCACGTTCCCTT
TGGGAGTGTACGCCACGAGCACGTGCCAGATGGGCAAGGAGCTGCCGTCG
GAGTTTTTTCGGGTGTTGGGAACGAATGGCCCATGGAAGTGAAATGCAAC
TCTCATCCATGACAGCTGTCTGGCTTCTTCCCATCGTCAGCTGCATTGTT
GCAGCTTCGTCAGGGGCCATCGTAGCGGATGTCCTCCCCGATCCACAGCA
CGCTCTCTGGACCGTGCTCGTGAGCTACGTTCTCTGGGGCATCGGATTAC
CTCTTGCACTAATGGTAATGGTGATCTACCTACAGCGACTGACCCTGCAC
AAATTGCCTCCTAAAGCGGTGATTGTGAGCGTGTTCCTCCCACTGGGACC
ACTTGGTCAGGGCGGCTTCGGTTGGTTTTCGGTTACCATGGGCACAGGCA
TTGTGTCTATTCTACTCAATACTCTTCCGTACAATGGCCAGTGGCTATAC
TGGATCTCTGTTGTCTGTTTTGCTTTTAATGTCCTCCTTTTTGCCATAGG
GTGTATCATCACCTTCCTTCGCTATACCCTATATCCGGAAATCTTCTTCG
CCATGATCAAGCATCCAGTCCAGTCCATGTTCATAGGAACATTTCCGATG
GGATTCGCGACTATCATCAACATGTTCTGTTTTGTCTGTGTTCCAGCCTG
GGGTGACTGGACGCGCAATTTTGCCTGGGGCTTGTGGATCTTTGATGCAA
TCTTTTCAGTCATCACTGCCCTCTCTCTGCCCTTCTTACTATGAGCGGAC
AAGATCCCAATAGCCAGTCCGAAATCACCAAGCATGATACGGGTTGGCGG
AGAGTAGTTCGCCATTTCACTCCATCATCCTCTCGCTTTGTGTGGTGGTT
CTATGGATTGTGGTCAGTATTGGGACATTGCGGGGAGTCGTGTCAGGCCG
GTTGTTCTTTGCGCCATGTTTGGGGGACTTGAAGGCACGGGACAACGAGA
ATAAAGATGGGACAAAGGCAGCCTGATATAATGAAACTGGGCCAAGCAGC
GCAGGAAATCTTCCCCAAAACACAGACCCTCGAGGCTGCATCTGGTCCGA
TCTTCTATACCATGGGGTTCATGATCGCTCTGATTCTCTGGTCCTTTGGA
CTCGTCTGGCTATTTTTTGCCTTGGCATCTATTGCGAGGAGCAAGAGTTT
CCCATTCAATATTGGATGGTGGGGATTCACGTTCCCTTTGGGAGTGTACG
CCACGAGCACGTGCCAGATGGGCAAGGAGCTGCCGTCGGAGTTTTTTCGG
GTGTTGGGAACGAATGGCCCATGGAAGTGAAATGCAACTCTCATCCATGA
CAGCTGTCTGGCTTCTTCCCATCGTCAGCTGCATTGTTGCAGCTTCGTCA
GGGGCCATCGTAGCGGATGTCCTCCCCGATCCACAGCACGCTCTCTGGAC
CGTGCTCGTGAGCTACGTTCTCTGGGGCATCGGATTACCTCTTGCACTAA
TGGTAATGGTGATCTACCTACAGCGACTGACCCTGCACAAATTGCCTCCT
AAAGCGGTGATTGTGAGCGTGTTCCTCCCACTGGGACCACTTGGTCAGGG
CGGCTTCGGTTGGTTTTCGGTTACCATGGGCACAGGCATTGTGTCTATTC
TACTCAATACTCTTCCGTACAATGGCCAGTGGCTATACTGGATCTCTGTT
GTCTGTTTTGCTTTTAATGTCCTCCTTTTTGCCATAGGGTGTATCATCAC
CTTCCTTCGCTATACCCTATATCCGGAAATCTTCTTCGCCATGATCAAGC
ATCCAGTCCAGTCCATGTTCATAGGAACATTTCCGATGGGATTCGCGACT
ATCATCAACATGTTCTGTTTTGTCTGTGTTCCAGCCTGGGGTGACTGGAC
GCGCAATTTTGCCTGGGGCTTGTGGATCTTTGATGCAATCTTTTCAGTCA
TCACTGCCCTCTCTCTGCCCTTCTTACTATGAGCGGACAAGATCCCAATA
GCCAGTCCGAAATCACCAAGCATGATACGGGTTGGCGGAGAGTAGTTCGC
CATTTCACTCCATCATCCTCTCGCTTTGTGTGGTGGTTCTATGGATTGTG
GTCAGTATTGGGACATTGCGGGGAGTCGTGTCAGGCCGGTTGTTCTTTGC
GCCATGTTTGGGGGACTTGAAGGCACGGGACAACGAGAATAAAGATGGGA
CAAAGGCAGCCTGATATAATGAAACTGGGCCAAGCAGCGCAGGAAATCTT
CCCCAAAACACAGACCCTCGAGGCTGCATCTGGTCCGATCTTCTATACCA
TGGGGTTCATGATCGCTCTGATTCTCTGGTCCTTTGGACTCGTCTGGCTA
TTTTTTGCCTTGGCATCTATTGCGAGGAGCAAGAGTTTCCCATTCAATAT
TGGATGGTGGGGATTCACGTTCCCTTTGGGAGTGTACGCCACGAGCACGT
GCCAGATGGGCAAGGAGCTGCCGTCGGAGTTTTTTCGGGTGTTGGGAACG
AATGGCCCATGGAAGTGAAATGCAACTCTCATCCATGACAGCTGTCTGGC
TTCTTCCCATCGTCAGCTGCATTGTTGCAGCTTCGTCAGGGGCCATCGTA
GCGGATGTCCTCCCCGATCCACAGCACGCTCTCTGGACCGTGCTCGTGAG
CTACGTTCTCTGGGGCATCGGATTACCTCTTGCACTAATGGTAATGGTGA
TCTACCTACAGCGACTGACCCTGCACAAATTGCCTCCTAAAGCGGTGATT
GTGAGCGTGTTCCTCCCACTGGGACCACTTGGTCAGGGCGGCTTCGGTTG
GTTTTCGGTTACCATGGGCACAGGCATTGTGTCTATTCTACTCAATACTC
TTCCGTACAATGGCCAGTGGCTATACTGGATCTCTGTTGTCTGTTTTGCT
TTTAATGTCCTCCTTTTTGCCATAGGGTGTATCATCACCTTCCTTCGCTA
TACCCTATATCCGGAAATCTTCTTCGCCATGATCAAGCATCCAGTCCAGT
CCATGTTCATAGGAACATTTCCGATGGGATTCGCGACTATCATCAACATG
TTCTGTTTTGTCTGTGTTCCAGCCTGGGGTGACTGGACGCGCAATTTTGC
CTGGGGCTTGTGGATCTTTGATGCAATCTTTTCAGTCATCACTGCCCTCT
CTCTGCCCTTCTTACTATGAGCGGACAAGATCCCAATAGCCAGTCCGAAA
TCACCAAGCATGATACGGGTTGGCGGAGAGTAGTTCGCCATTTCACTCCA
TCATCCTCTCGCTTTGTGTGGTGGTTCTATGGATTGTGGTCAGTATTGGG
ACATTGCGGGGAGTCGTGTCAGGCCGGTTGTTCTTTGCGCCATGTTTGGG
GGACTTGAAGGCACGGGACAACGAGAATAAAGATGGGACAAAGGCAGCCT
GATATAATGAAACTGGGCCAAGCAGCGCAGGAAATCTTCCCCAAAACACA
GACCCTCGAGGCTGCATCTGGTCCGATCTTCTATACCATGGGGTTCATGA
TCGCTCTGATTCTCTGGTCCTTTGGACTCGTCTGGCTATTTTTTGCCTTG
GCATCTATTGCGAGGAGCAAGAGTTTCCCATTCAATATTGGATGGTGGGG
ATTCACGTTCCCTTTGGGAGTGTACGCCACGAGCACGTGCCAGATGGGCA
AGGAGCTGCCGTCGGAGTTTTTTCGGGTGTTGGGAACGAATGGCCCATGG
AAGTGAAATGCAACTCTCATCCATGACAGCTGTCTGGCTTCTTCCCATCG
TCAGCTGCATTGTTGCAGCTTCGTCAGGGGCCATCGTAGCGGATGTCCTC
CCCGATCCACAGCACGCTCTCTGGACCGTGCTCGTGAGCTACGTTCTCTG
GGGCATCGGATTACCTCTTGCACTAATGGTAATGGTGATCTACCTACAGC
GACTGACCCTGCACAAATTGCCTCCTAAAGCGGTGATTGTGAGCGTGTTC
CTCCCACTGGGACCACTTGGTCAGGGCGGCTTCGGTTGGTTTTCGGTTAC
CATGGGCACAGGCATTGTGTCTATTCTACTCAATACTCTTCCGTACAATG
GCCAGTGGCTATACTGGATCTCTGTTGTCTGTTTTGCTTTTAATGTCCTC
CTTTTTGCCATAGGGTGTATCATCACCTTCCTTCGCTATACCCTATATCC
GGAAATCTTCTTCGCCATGATCAAGCATCCAGTCCAGTCCATGTTCATAG
GAACATTTCCGATGGGATTCGCGACTATCATCAACATGTTCTGTTTTGTC
TGTGTTCCAGCCTGGGGTGACTGGACGCGCAATTTTGCCTGGGGCTTGTG
GATCTTTGATGCAATCTTTTCAGTCATCACTGCCCTCTCTCTGCCCTTCT
TACTATGAGCGGACAAGATCCCAATAGCCAGTCCGAAATCACCAAGCATG
ATACGGGTTGGCGGAGAGTAGTTCGCCATTTCACTCCATC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003161ATCC10864_003161Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003161-T1ATCC10864_003161-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003161-T1.cdsATCC10864_003161-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003161-T1.exon5ATCC10864_003161-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_003161-T1.exon4ATCC10864_003161-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_003161-T1.exon3ATCC10864_003161-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_003161-T1.exon2ATCC10864_003161-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003161-T1.exon1ATCC10864_003161-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR038665
PFAMPF03595
InterProIPR004695
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000066supercontigMCQH01000066:247547..248963 -
Powered by Drupal