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ATCC10864_003222-T1, ATCC10864_003222-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003222-T1
Unique NameATCC10864_003222-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000066:433725..436070+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003222-T1 ID=ATCC10864_003222-T1|Name=ATCC10864_003222-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2346bp|location=Sequence derived from alignment at MCQH01000066:433725..436070+ (Aspergillus niger ATCC 10864)
ATGTCTGGTCTCAGCTCTCCTTTGATGCCATGCGACCGCTCTGTCTCCAT
CCCTTGTCGGCGATACGATGCGGATGCCACCCTGTTGCTCGTGGGGTTCG
TCGGTGCCGGAAAGAAGACCCTAGGTATTATAGCATCTGTCGCCCTGCGG
CGCAGATTTATTGATTTCGATGCTGTATTTCGTCAGGAGGTGCACTTATC
TCCCCAGGAGTACATTGCACAAAATGGTCCCGCGCGATACCGGGAGCTGG
AGCTGAAATTGACTCGCACTCTGCTAGATAAATGCTCCACAGGATGTGTA
ATTACCATCTCGGGCGTGGGATGGTCGGCAAATCGCCAGCAGCAGGTGCT
TTTGAAGGAGTTTGCACAGAACCATCCCGTGGTGTATGTCAGACGCGACA
GGGTGGATCTTCAACAGTTCATCATGACCACTAGCCCTGACAAGTTCAAC
CGGATCTTTGAAGCGGGCAATGAGTTCTTCCAGTCATGCTCCAGCTTTGA
CTTTTTCAATCACACACAGGAAGACAAGTTGACAGACTATGCTGGTCGCC
CACTCCCGGCGTATATCAAACTCAAGGAAGCTGAACGAGTGTTCCTAAGG
TTCTTGCATCAGGTCTTCGGTCGTGCTTATCATGTGCTCTATTCTTCGGA
CCCGTTTTCACCGTCTCATACATATGCGCTACAGGTGCCGCTAACCTGGC
TGGACTGCAATCCGGACCTGGAACTATTGGAGAGTGGCGCTGACGCGGTT
ACTATTGTGATTGACGGGGGAGTCGGTGATAATTACAATGCCCGATTCCT
GGAAAGAATTGCCAAGCACATGGCGACGATCCGGAAGCATACTCGGATTC
CAATATTCATCGAGATTTCGCAGTCAGATGCTAGACGCGGTGAGCTCTTG
GAGATGCTGCTTCGACTCGCACCCGATGCTGTGGCATGTCCTGTTGACGG
CTGCGAATTTAGCAGATTAAAGTTGGCTAAAGGCCACACTAAGATCATTG
CCACCTATCAGTCAACCTCCTTGGCTAGGGACCAGAGTATCCTTCCTGAA
ATACGTTCTCTTCTGGAGAATTCAGAAGAGCAAGGGTTCGATGCCTTTCG
CGTTACTATAGAGCCCAGCTTCCCAGGGGATCTCACGAATCTTACTTTGC
AGCAACGGCTGGGTGAGGTAACAGACATTCCCATAACCGTATACCATAGT
GGGCCACTCGGACGAGCATCTATATGTCTAAATCCCATTCTCTCGCCAGT
GGTCCTCCCATCTCTTCCGGATAGTGCCACAGGGGTCACACTCGCATCGG
CCCAGCAAGCACTTACATCCTGCTACCTGCTTCCGAAACAAACCTTCACC
GTCTTCGGCCAAAAAGTCCAAAACAGTCTCTCACCAGCAATGCACAATGC
AGCCTACTCTGCCTGCGGTCTACCACACGCCTACAACATATTATGCAGTG
ATCACTTCTCCGACATCCACAAACTCCTAAACAGCGCAGAGCATGGAGGA
ATAGCTGTAACACTACCATACAAAACGGACGTCCTCCCATTACTAGACGA
AGTCAGCCCAGATGCCCAGGACATCCACGCCGTAAACACGGTGGTCATCG
AGCACCGAAATAGCAGTACCAACAGCCCCTCCAAGGTCCTTAAAGGCTAC
AACACAGATTATCTCGGGATCCGCGACTGCATCAACAAACACCTCTCTCC
CGCCAATGCCATCCGACACGGCACCACAGCCTTGGTAATAGGCGCAGGCG
GAATGGCCCGCGCAGCCATCTATGCATGCTACCAGCTCGGCGTCCGCCAG
ATCTGCATCTATAACCGGACTGTTTCGAATGCGCAGAAGCTAGCTGACTA
TTATACCCGGTGGGCTGAGAGGAATAATACCCATCTGAAGATCGAGATTC
TGCGATCGAGTGACGACGCCTGGCCAGAGGGCTTTCGTCAACCGACTATT
ATTGTTGCGTGTTTGCCGGCGCCGGCTGGAGGGCAGTTGAAGTCCCCTAT
TACGATGGAGGTGCCGGAGCAGTGGTTGAGGAGTACGACTGGGGGTGTTT
TCATTGATGTATGTGTTCTCAAATACCCTGATTTTTTAATGAGAGGTGCT
AACTGGACAGGTGGCGTATGGAATGCCGCAGACCAAGCTGAGAATTGGTA
TGAATGAACGAGCGAGTATGGGCTGGGTCGTGGTTGATGGTCTGGTGGTG
TTGTTGGAGCAGGGCATTGCGCAGTATGAGCTGTTTACAAGGAGGCCGGC
GCCGGTGCATGTGATGAGGGGGGTATTGAGGGAGTATACTAATGCAACAC
TTAGCAGGTAGTATGTGTCTCGCATGTTGATACCATTTCTGTTTGA
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Coding sequence (CDS) from alignment at MCQH01000066:433725..436070+

>ATCC10864_003222-T1 ID=ATCC10864_003222-T1|Name=ATCC10864_003222-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6732bp|location=Sequence derived from alignment at MCQH01000066:433725..436070+ (Aspergillus niger ATCC 10864)
ATGTCTGGTCTCAGCTCTCCTTTGATGCCATGCGACCGCTCTGTCTCCAT
CCCTTGTCGGCGATACGATGCGGATGCCACCCTGTTGCTCGTGGGGTTCG
TCGGTGCCGGAAAGAAGACCCTAGGTATTATAGCATCTGTCGCCCTGCGG
CGCAGATTTATTGATTTCGATGCTGTATTTCGTCAGGAGGTGCACTTATC
TCCCCAGGAGTACATTGCACAAAATGGTCCCGCGCGATACCGGGAGCTGG
AGCTGAAATTGACTCGCACTCTGCTAGATAAATGCTCCACAGGATGTGTA
ATTACCATCTCGGGCGTGGGATGGTCGGCAAATCGCCAGCAGCAGGTGCT
TTTGAAGGAGTTTGCACAGAACCATCCCGTGGTGTATGTCAGACGCGACA
GGGTGGATCTTCAACAGTTCATCATGACCACTAGCCCTGACAAGTTCAAC
CGGATCTTTGAAGCGGGCAATGAGTTCTTCCAGTCATGCTCCAGCTTTGA
CTTTTTCAATCACACACAGGAAGACAAGTTGACAGACTATGCTGGTCGCC
CACTCCCGGCGTATATCAAACTCAAGGAAGCTGAACGAGTGTTCCTAAGG
TTCTTGCATCAGGTCTTCGGTCGTGCTTATCATGTGCTCTATTCTTCGGA
CCCGTTTTCACCGTCTCATACATATGCGCTACAGGTGCCGCTAACCTGGC
TGGACTGCAATCCGGACCTGGAACTATTGGAGAGTGGCGCTGACGCGGTT
ACTATTGTGATTGACGGGGGAGTCGGTGATAATTACAATGCCCGATTCCT
GGAAAGAATTGCCAAGCACATGGCGACGATCCGGAAGCATACTCGGATTC
CAATATTCATCGAGATTTCGCAGTCAGATGCTAGACGCGGTGAGCTCTTG
GAGATGCTGCTTCGACTCGCACCCGATGCTGTGGCATGTCCTGTTGACGG
CTGCGAATTTAGCAGATTAAAGTTGGCTAAAGGCCACACTAAGATCATTG
CCACCTATCAGTCAACCTCCTTGGCTAGGGACCAGAGTATCCTTCCTGAA
ATACGTTCTCTTCTGGAGAATTCAGAAGAGCAAGGGTTCGATGCCTTTCG
CGTTACTATAGAGCCCAGCTTCCCAGGGGATCTCACGAATCTTACTTTGC
AGCAACGGCTGGGTGAGGTAACAGACATTCCCATAACCGTATACCATAGT
GGGCCACTCGGACGAGCATCTATATGTCTAAATCCCATTCTCTCGCCAGT
GGTCCTCCCATCTCTTCCGGATAGTGCCACAGGGGTCACACTCGCATCGG
CCCAGCAAGCACTTACATCCTGCTACCTGCTTCCGAAACAAACCTTCACC
GTCTTCGGCCAAAAAGTCCAAAACAGTCTCTCACCAGCAATGCACAATGC
AGCCTACTCTGCCTGCGGTCTACCACACGCCTACAACATATTATGCAGTG
ATCACTTCTCCGACATCCACAAACTCCTAAACAGCGCAGAGCATGGAGGA
ATAGCTGTAACACTACCATACAAAACGGACGTCCTCCCATTACTAGACGA
AGTCAGCCCAGATGCCCAGGACATCCACGCCGTAAACACGGTGGTCATCG
AGCACCGAAATAGCAGTACCAACAGCCCCTCCAAGGTCCTTAAAGGCTAC
AACACAGATTATCTCGGGATCCGCGACTGCATCAACAAACACCTCTCTCC
CGCCAATGCCATCCGACACGGCACCACAGCCTTGGTAATAGGCGCAGGCG
GAATGGCCCGCGCAGCCATCTATGCATGCTACCAGCTCGGCGTCCGCCAG
ATCTGCATCTATAACCGGACTGTTTCGAATGCGCAGAAGCTAGCTGACTA
TTATACCCGGTGGGCTGAGAGGAATAATACCCATCTGAAGATCGAGATTC
TGCGATCGAGTGACGACGCCTGGCCAGAGGGCTTTCGTCAACCGACTATT
ATTGTTGCGTGTTTGCCGGCGCCGGCTGGAGGGCAGTTGAAGTCCCCTAT
TACGATGGAGGTGCCGGAGCAGTGGTTGAGGAGTACGACTGGGGGTGTTT
TCATTGATGTGGCGTATGGAATGCCGCAGACCAAGCTGAGAATTGGTATG
AATGAACGAGCGAGTATGGGCTGGGTCGTGGTTGATGGTCTGGTGGTGTT
GTTGGAGCAGGGCATTGCGCAGTATGAGCTGTTTACAAGGAGGCCGGCGC
CGCAGGTAGTATGTGTCTCGCATGTTGATACCATTTCTGTTTGAATGTCT
GGTCTCAGCTCTCCTTTGATGCCATGCGACCGCTCTGTCTCCATCCCTTG
TCGGCGATACGATGCGGATGCCACCCTGTTGCTCGTGGGGTTCGTCGGTG
CCGGAAAGAAGACCCTAGGTATTATAGCATCTGTCGCCCTGCGGCGCAGA
TTTATTGATTTCGATGCTGTATTTCGTCAGGAGGTGCACTTATCTCCCCA
GGAGTACATTGCACAAAATGGTCCCGCGCGATACCGGGAGCTGGAGCTGA
AATTGACTCGCACTCTGCTAGATAAATGCTCCACAGGATGTGTAATTACC
ATCTCGGGCGTGGGATGGTCGGCAAATCGCCAGCAGCAGGTGCTTTTGAA
GGAGTTTGCACAGAACCATCCCGTGGTGTATGTCAGACGCGACAGGGTGG
ATCTTCAACAGTTCATCATGACCACTAGCCCTGACAAGTTCAACCGGATC
TTTGAAGCGGGCAATGAGTTCTTCCAGTCATGCTCCAGCTTTGACTTTTT
CAATCACACACAGGAAGACAAGTTGACAGACTATGCTGGTCGCCCACTCC
CGGCGTATATCAAACTCAAGGAAGCTGAACGAGTGTTCCTAAGGTTCTTG
CATCAGGTCTTCGGTCGTGCTTATCATGTGCTCTATTCTTCGGACCCGTT
TTCACCGTCTCATACATATGCGCTACAGGTGCCGCTAACCTGGCTGGACT
GCAATCCGGACCTGGAACTATTGGAGAGTGGCGCTGACGCGGTTACTATT
GTGATTGACGGGGGAGTCGGTGATAATTACAATGCCCGATTCCTGGAAAG
AATTGCCAAGCACATGGCGACGATCCGGAAGCATACTCGGATTCCAATAT
TCATCGAGATTTCGCAGTCAGATGCTAGACGCGGTGAGCTCTTGGAGATG
CTGCTTCGACTCGCACCCGATGCTGTGGCATGTCCTGTTGACGGCTGCGA
ATTTAGCAGATTAAAGTTGGCTAAAGGCCACACTAAGATCATTGCCACCT
ATCAGTCAACCTCCTTGGCTAGGGACCAGAGTATCCTTCCTGAAATACGT
TCTCTTCTGGAGAATTCAGAAGAGCAAGGGTTCGATGCCTTTCGCGTTAC
TATAGAGCCCAGCTTCCCAGGGGATCTCACGAATCTTACTTTGCAGCAAC
GGCTGGGTGAGGTAACAGACATTCCCATAACCGTATACCATAGTGGGCCA
CTCGGACGAGCATCTATATGTCTAAATCCCATTCTCTCGCCAGTGGTCCT
CCCATCTCTTCCGGATAGTGCCACAGGGGTCACACTCGCATCGGCCCAGC
AAGCACTTACATCCTGCTACCTGCTTCCGAAACAAACCTTCACCGTCTTC
GGCCAAAAAGTCCAAAACAGTCTCTCACCAGCAATGCACAATGCAGCCTA
CTCTGCCTGCGGTCTACCACACGCCTACAACATATTATGCAGTGATCACT
TCTCCGACATCCACAAACTCCTAAACAGCGCAGAGCATGGAGGAATAGCT
GTAACACTACCATACAAAACGGACGTCCTCCCATTACTAGACGAAGTCAG
CCCAGATGCCCAGGACATCCACGCCGTAAACACGGTGGTCATCGAGCACC
GAAATAGCAGTACCAACAGCCCCTCCAAGGTCCTTAAAGGCTACAACACA
GATTATCTCGGGATCCGCGACTGCATCAACAAACACCTCTCTCCCGCCAA
TGCCATCCGACACGGCACCACAGCCTTGGTAATAGGCGCAGGCGGAATGG
CCCGCGCAGCCATCTATGCATGCTACCAGCTCGGCGTCCGCCAGATCTGC
ATCTATAACCGGACTGTTTCGAATGCGCAGAAGCTAGCTGACTATTATAC
CCGGTGGGCTGAGAGGAATAATACCCATCTGAAGATCGAGATTCTGCGAT
CGAGTGACGACGCCTGGCCAGAGGGCTTTCGTCAACCGACTATTATTGTT
GCGTGTTTGCCGGCGCCGGCTGGAGGGCAGTTGAAGTCCCCTATTACGAT
GGAGGTGCCGGAGCAGTGGTTGAGGAGTACGACTGGGGGTGTTTTCATTG
ATGTGGCGTATGGAATGCCGCAGACCAAGCTGAGAATTGGTATGAATGAA
CGAGCGAGTATGGGCTGGGTCGTGGTTGATGGTCTGGTGGTGTTGTTGGA
GCAGGGCATTGCGCAGTATGAGCTGTTTACAAGGAGGCCGGCGCCGCAGG
TAGTATGTGTCTCGCATGTTGATACCATTTCTGTTTGAATGTCTGGTCTC
AGCTCTCCTTTGATGCCATGCGACCGCTCTGTCTCCATCCCTTGTCGGCG
ATACGATGCGGATGCCACCCTGTTGCTCGTGGGGTTCGTCGGTGCCGGAA
AGAAGACCCTAGGTATTATAGCATCTGTCGCCCTGCGGCGCAGATTTATT
GATTTCGATGCTGTATTTCGTCAGGAGGTGCACTTATCTCCCCAGGAGTA
CATTGCACAAAATGGTCCCGCGCGATACCGGGAGCTGGAGCTGAAATTGA
CTCGCACTCTGCTAGATAAATGCTCCACAGGATGTGTAATTACCATCTCG
GGCGTGGGATGGTCGGCAAATCGCCAGCAGCAGGTGCTTTTGAAGGAGTT
TGCACAGAACCATCCCGTGGTGTATGTCAGACGCGACAGGGTGGATCTTC
AACAGTTCATCATGACCACTAGCCCTGACAAGTTCAACCGGATCTTTGAA
GCGGGCAATGAGTTCTTCCAGTCATGCTCCAGCTTTGACTTTTTCAATCA
CACACAGGAAGACAAGTTGACAGACTATGCTGGTCGCCCACTCCCGGCGT
ATATCAAACTCAAGGAAGCTGAACGAGTGTTCCTAAGGTTCTTGCATCAG
GTCTTCGGTCGTGCTTATCATGTGCTCTATTCTTCGGACCCGTTTTCACC
GTCTCATACATATGCGCTACAGGTGCCGCTAACCTGGCTGGACTGCAATC
CGGACCTGGAACTATTGGAGAGTGGCGCTGACGCGGTTACTATTGTGATT
GACGGGGGAGTCGGTGATAATTACAATGCCCGATTCCTGGAAAGAATTGC
CAAGCACATGGCGACGATCCGGAAGCATACTCGGATTCCAATATTCATCG
AGATTTCGCAGTCAGATGCTAGACGCGGTGAGCTCTTGGAGATGCTGCTT
CGACTCGCACCCGATGCTGTGGCATGTCCTGTTGACGGCTGCGAATTTAG
CAGATTAAAGTTGGCTAAAGGCCACACTAAGATCATTGCCACCTATCAGT
CAACCTCCTTGGCTAGGGACCAGAGTATCCTTCCTGAAATACGTTCTCTT
CTGGAGAATTCAGAAGAGCAAGGGTTCGATGCCTTTCGCGTTACTATAGA
GCCCAGCTTCCCAGGGGATCTCACGAATCTTACTTTGCAGCAACGGCTGG
GTGAGGTAACAGACATTCCCATAACCGTATACCATAGTGGGCCACTCGGA
CGAGCATCTATATGTCTAAATCCCATTCTCTCGCCAGTGGTCCTCCCATC
TCTTCCGGATAGTGCCACAGGGGTCACACTCGCATCGGCCCAGCAAGCAC
TTACATCCTGCTACCTGCTTCCGAAACAAACCTTCACCGTCTTCGGCCAA
AAAGTCCAAAACAGTCTCTCACCAGCAATGCACAATGCAGCCTACTCTGC
CTGCGGTCTACCACACGCCTACAACATATTATGCAGTGATCACTTCTCCG
ACATCCACAAACTCCTAAACAGCGCAGAGCATGGAGGAATAGCTGTAACA
CTACCATACAAAACGGACGTCCTCCCATTACTAGACGAAGTCAGCCCAGA
TGCCCAGGACATCCACGCCGTAAACACGGTGGTCATCGAGCACCGAAATA
GCAGTACCAACAGCCCCTCCAAGGTCCTTAAAGGCTACAACACAGATTAT
CTCGGGATCCGCGACTGCATCAACAAACACCTCTCTCCCGCCAATGCCAT
CCGACACGGCACCACAGCCTTGGTAATAGGCGCAGGCGGAATGGCCCGCG
CAGCCATCTATGCATGCTACCAGCTCGGCGTCCGCCAGATCTGCATCTAT
AACCGGACTGTTTCGAATGCGCAGAAGCTAGCTGACTATTATACCCGGTG
GGCTGAGAGGAATAATACCCATCTGAAGATCGAGATTCTGCGATCGAGTG
ACGACGCCTGGCCAGAGGGCTTTCGTCAACCGACTATTATTGTTGCGTGT
TTGCCGGCGCCGGCTGGAGGGCAGTTGAAGTCCCCTATTACGATGGAGGT
GCCGGAGCAGTGGTTGAGGAGTACGACTGGGGGTGTTTTCATTGATGTGG
CGTATGGAATGCCGCAGACCAAGCTGAGAATTGGTATGAATGAACGAGCG
AGTATGGGCTGGGTCGTGGTTGATGGTCTGGTGGTGTTGTTGGAGCAGGG
CATTGCGCAGTATGAGCTGTTTACAAGGAGGCCGGCGCCGCAGGTAGTAT
GTGTCTCGCATGTTGATACCATTTCTGTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004764shikimate 3-dehydrogenase (NADP+) activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003222ATCC10864_003222Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003222-T1.exon1ATCC10864_003222-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_003222-T1.exon2ATCC10864_003222-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003222-T1.exon3ATCC10864_003222-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003222-T1.cdsATCC10864_003222-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003222-T1ATCC10864_003222-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR006151
PFAMPF01202
InterProIPR027417
InterProIPR013708
InterProIPR036291
InterProIPR031322
InterProIPR013785
PFAMPF08501
PFAMPF01487
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000066supercontigMCQH01000066:433725..436070 +
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