You are here

Home

ATCC10864_003302-T1, ATCC10864_003302-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003302-T1
Unique NameATCC10864_003302-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000066:721457..723219+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003302-T1 ID=ATCC10864_003302-T1|Name=ATCC10864_003302-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1763bp|location=Sequence derived from alignment at MCQH01000066:721457..723219+ (Aspergillus niger ATCC 10864)
ATGGCGTTCAACTTCAACTGGTCGCCTTTAATGGCGGACGCGAGCTTCTA
CACTCGCGCCCAAGAGCTGTTAACTGCCGCTTTGAATAAATCGCCAAAAC
CGCCGATAATCGTGGACGATATCCATGTCACCGAACTAAATCTCGGTTCT
ATCCCGCCGGAGCTGGAGATCTTGGAAATCGGAGACTTGGCTGAGGATCG
CTTTCGAGGCATCTTTAAGATGTCCTATACGGGCGATGCCTTTCTGACCC
TGAAAACCCGCGTCCAAGCAAATCCGCTCAATACCTATCTTCTCACCCGA
CCGTCCTTTGCGACTCCCTTACCGGTCGCTGCAGCGTATGTGTTGTTGGA
TTACCCTAATACGCAGCCAAGCGCATCCTTGCTGACCTGATCGCCATGAA
TTGCAGAACTCCGTTGACTATTCCTCTTCAAATCACCCTTTCCGACTTCA
AACTTTCCGGCTTCGTCATATTAGTCTTTTCGAAGCAAAAAGGCATTACA
GTCGTCTTCCGAAATGACCCCCTTGAGTCACTCAAAGTATCATCGACATT
CGATTCGATTCCCTTCGTGCGCGACTTTCTACAGCGAGAAATAGAAGGCC
AGCTTCGCGTTTTGTTCATGGATGAGTTGCCCGCCATCATCCATCGGCTG
TCTCTCCGATTATGGGTTCCAGAATACCGGGCTGGAGAGGAAATGGCGAA
CCGTGCCACCAACACCGCAGGTGAGGGGCCTGGCCAGGACCCCTTGGCGA
GTCCTCCACAGGATCCTGTAGATGCTCAAGGCAACGCTTTGGATGAATCG
GAGATCGCTTCACTTTCCTTGGATTCCTCGGTCGAGACGCACTCCTTGTT
CTCACAGAAGAACCTGCTACGTCTGGCCGCACTTACGGACTCCCAGCGAA
CGCTATCGCTGTTTACTCCGTCTATTCAAGAAGTGGTTTACCGCGCATGG
ACTTCGCCTTCTGATGCGGGCGAAGTTTCGGGTGGCGTCATGTCTCCCCT
GAGCCCAGCACTTTCCCGGACCCAATCCCAAGTCGGCGGGATGTCGTCTT
TCCATGATACAGCCAGCATGGTGTCCTCACAGACTCGGTCTTCGACGAAC
ACCCACACTTTCAGCAGCTACGGTCTGAGCTTGGGAGCCGGTCGTCACTC
GAAATCCAATGCTCGCAGGCGGAAGAAGCGCGTGGTGGACCTGCGTCGTC
CCAAGACTACTGAGGATGCCGTCAGTGTGAGCGGCGAGAGCACTTATACG
GAGACCACCAGCGCACCGTCTATCTGCTCTGCACCTTTGCCGGTGGTCAG
CGAACAGACCGATGACCCAGTGACTCCCCCGTTGTCTCCGGACAGTGAAC
TCCACCTTCCTACGGTTCCCGAACGACACCGCTTGAGTATTTCCAGGCAG
ATGCCCCGCCGCGATATTGCGACTGAAATGTTGCGTGAGACCGGAGAGTC
GTCGGCTCAGCCGGTCAACCATTCGGCGGTTGATGTTAACGCTACTCCGC
GGGTGGCTGTACACCCCTACATTGCTGCTCAACATGAGAGCGAGAAGGAA
GAAGCAAGCGCCCCACGCCAACTCCCTTCCAAGGCGCTTCCACTGTCCGA
TGCCAAGCCGACATCCAGCATCGTTGACCAAGCGCTGGTTGAACGACTGG
CCGGAGAAATTGCTCGTCGCATGCGGGAGGAGAAATTGACTCCCGGCAAT
TCGTGCAGTTCGTTCTGGGATCGTCTCAGCCATGATGATGCCCCCCCGGC
GTATGGTCAGTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000066:721457..723219+

>ATCC10864_003302-T1 ID=ATCC10864_003302-T1|Name=ATCC10864_003302-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3384bp|location=Sequence derived from alignment at MCQH01000066:721457..723219+ (Aspergillus niger ATCC 10864)
ATGGCGTTCAACTTCAACTGGTCGCCTTTAATGGCGGACGCGAGCTTCTA
CACTCGCGCCCAAGAGCTGTTAACTGCCGCTTTGAATAAATCGCCAAAAC
CGCCGATAATCGTGGACGATATCCATGTCACCGAACTAAATCTCGGTTCT
ATCCCGCCGGAGCTGGAGATCTTGGAAATCGGAGACTTGGCTGAGGATCG
CTTTCGAGGCATCTTTAAGATGTCCTATACGGGCGATGCCTTTCTGACCC
TGAAAACCCGCGTCCAAGCAAATCCGCTCAATACCTATCTTCTCACCCGA
CCGTCCTTTGCGACTCCCTTACCGGTCGCTGCAGCAACTCCGTTGACTAT
TCCTCTTCAAATCACCCTTTCCGACTTCAAACTTTCCGGCTTCGTCATAT
TAGTCTTTTCGAAGCAAAAAGGCATTACAGTCGTCTTCCGAAATGACCCC
CTTGAGTCACTCAAAGTATCATCGACATTCGATTCGATTCCCTTCGTGCG
CGACTTTCTACAGCGAGAAATAGAAGGCCAGCTTCGCGTTTTGTTCATGG
ATGAGTTGCCCGCCATCATCCATCGGCTGTCTCTCCGATTATGGGTTCCA
GAATACCGGGCTGGAGAGGAAATGGCGAACCGTGCCACCAACACCGCAGG
TGAGGGGCCTGGCCAGGACCCCTTGGCGAGTCCTCCACAGGATCCTGTAG
ATGCTCAAGGCAACGCTTTGGATGAATCGGAGATCGCTTCACTTTCCTTG
GATTCCTCGGTCGAGACGCACTCCTTGTTCTCACAGAAGAACCTGCTACG
TCTGGCCGCACTTACGGACTCCCAGCGAACGCTATCGCTGTTTACTCCGT
CTATTCAAGAAGTGGTTTACCGCGCATGGACTTCGCCTTCTGATGCGGGC
GAAGTTTCGGGTGGCGTCATGTCTCCCCTGAGCCCAGCACTTTCCCGGAC
CCAATCCCAAGTCGGCGGGATGTCGTCTTTCCATGATACAGCCAGCATGG
TGTCCTCACAGACTCGGTCTTCGACGAACACCCACACTTTCAGCAGCTAC
GGTCTGAGCTTGGGAGCCGGTCGTCACTCGAAATCCAATGCTCGCAGGCG
GAAGAAGCGCGTGGTGGACCTGCGTCGTCCCAAGACTACTGAGGATGCCG
TCAGTGTGAGCGGCGAGAGCACTTATACGGAGACCACCAGCGCACCGTCT
ATCTGCTCTGCACCTTTGCCGGTGGTCAGCGAACAGACCGATGACCCAGT
GACTCCCCCGTTGTCTCCGGACAGTGAACTCCACCTTCCTACGGTTCCCG
AACGACACCGCTTGAGTATTTCCAGGCAGATGCCCCGCCGCGATATTGCG
ACTGAAATGTTGCGTGAGACCGGAGAGTCGTCGGCTCAGCCGGTCAACCA
TTCGGCGGTTGATGTTAACGCTACTCCGCGGGTGGCTGTACACCCCTACA
TTGCTGCTCAACATGAGAGCGAGAAGGAAGAAGCAAGCGCCCCACGCCAA
CTCCCTTCCAAGGCGCTTCCACTGTCCGATGCCAAGCCGACATCCAGCAT
CGTTGACCAAGCGCTGGTTGAACGACTGGCCGGAGAAATTGCTCGTCGCA
TGCGGGAGGAGAAATTGACTCCCGGCAATTCGTGCAGTTCGTTCTGGGAT
CGTCTCAGCCATGATGATGCCCCCCCGGCGTATGGTCAGTGAATGGCGTT
CAACTTCAACTGGTCGCCTTTAATGGCGGACGCGAGCTTCTACACTCGCG
CCCAAGAGCTGTTAACTGCCGCTTTGAATAAATCGCCAAAACCGCCGATA
ATCGTGGACGATATCCATGTCACCGAACTAAATCTCGGTTCTATCCCGCC
GGAGCTGGAGATCTTGGAAATCGGAGACTTGGCTGAGGATCGCTTTCGAG
GCATCTTTAAGATGTCCTATACGGGCGATGCCTTTCTGACCCTGAAAACC
CGCGTCCAAGCAAATCCGCTCAATACCTATCTTCTCACCCGACCGTCCTT
TGCGACTCCCTTACCGGTCGCTGCAGCAACTCCGTTGACTATTCCTCTTC
AAATCACCCTTTCCGACTTCAAACTTTCCGGCTTCGTCATATTAGTCTTT
TCGAAGCAAAAAGGCATTACAGTCGTCTTCCGAAATGACCCCCTTGAGTC
ACTCAAAGTATCATCGACATTCGATTCGATTCCCTTCGTGCGCGACTTTC
TACAGCGAGAAATAGAAGGCCAGCTTCGCGTTTTGTTCATGGATGAGTTG
CCCGCCATCATCCATCGGCTGTCTCTCCGATTATGGGTTCCAGAATACCG
GGCTGGAGAGGAAATGGCGAACCGTGCCACCAACACCGCAGGTGAGGGGC
CTGGCCAGGACCCCTTGGCGAGTCCTCCACAGGATCCTGTAGATGCTCAA
GGCAACGCTTTGGATGAATCGGAGATCGCTTCACTTTCCTTGGATTCCTC
GGTCGAGACGCACTCCTTGTTCTCACAGAAGAACCTGCTACGTCTGGCCG
CACTTACGGACTCCCAGCGAACGCTATCGCTGTTTACTCCGTCTATTCAA
GAAGTGGTTTACCGCGCATGGACTTCGCCTTCTGATGCGGGCGAAGTTTC
GGGTGGCGTCATGTCTCCCCTGAGCCCAGCACTTTCCCGGACCCAATCCC
AAGTCGGCGGGATGTCGTCTTTCCATGATACAGCCAGCATGGTGTCCTCA
CAGACTCGGTCTTCGACGAACACCCACACTTTCAGCAGCTACGGTCTGAG
CTTGGGAGCCGGTCGTCACTCGAAATCCAATGCTCGCAGGCGGAAGAAGC
GCGTGGTGGACCTGCGTCGTCCCAAGACTACTGAGGATGCCGTCAGTGTG
AGCGGCGAGAGCACTTATACGGAGACCACCAGCGCACCGTCTATCTGCTC
TGCACCTTTGCCGGTGGTCAGCGAACAGACCGATGACCCAGTGACTCCCC
CGTTGTCTCCGGACAGTGAACTCCACCTTCCTACGGTTCCCGAACGACAC
CGCTTGAGTATTTCCAGGCAGATGCCCCGCCGCGATATTGCGACTGAAAT
GTTGCGTGAGACCGGAGAGTCGTCGGCTCAGCCGGTCAACCATTCGGCGG
TTGATGTTAACGCTACTCCGCGGGTGGCTGTACACCCCTACATTGCTGCT
CAACATGAGAGCGAGAAGGAAGAAGCAAGCGCCCCACGCCAACTCCCTTC
CAAGGCGCTTCCACTGTCCGATGCCAAGCCGACATCCAGCATCGTTGACC
AAGCGCTGGTTGAACGACTGGCCGGAGAAATTGCTCGTCGCATGCGGGAG
GAGAAATTGACTCCCGGCAATTCGTGCAGTTCGTTCTGGGATCGTCTCAG
CCATGATGATGCCCCCCCGGCGTATGGTCAGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008289lipid binding
Vocabulary: Biological Process
TermDefinition
GO:0007005mitochondrion organization
Vocabulary: Cellular Component
TermDefinition
GO:0032865ERMES complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MDM34ATCC10864_003302Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003302-T1.exon1ATCC10864_003302-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_003302-T1.exon2ATCC10864_003302-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003302-T1.cdsATCC10864_003302-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003302-T1ATCC10864_003302-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR027536
InterProIPR031468
Properties
Property NameValue
NoteBUSCO:EOG09261S0S
ProductERMES complex subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000066supercontigMCQH01000066:721457..723219 +
Powered by Drupal