|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000066:727998..730472- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_003305-T1 ID=ATCC10864_003305-T1|Name=ATCC10864_003305-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2475bp|location=Sequence derived from alignment at MCQH01000066:727998..730472- (Aspergillus niger ATCC 10864)
ATGCGCGGAGCCAGGTTGCTGGCTTCCTGGGCCCCCGGCGTCACCGCCAG
ACGGGGAGCTCAGGTGAATGGGAGCATACTCAATGAGCTCTACTTCAATG
CTCGTCCACTTCAATCAGGAATTGGCATCTCTGGCGTCTCTAGCCGACAA
TTCTCGGGAATTTCGGCTTCATTACGCAACAACTTCTCGCTGACGTCTGG
ACTATCCATCCGTCAAAGTAACGGTTCACGGTTCGATATCATCCGGTCGC
AATTAATAGCGCAATCTCGGTGCTTCTCCTCGTCGCAACGGTCATTGGAA
TCCAAGCCAGTGAACTCATCGACTAAATCTGCTCAAACGAATAACGCCAC
GGCTCAAGACAAGGAAGATGAAGACATAGACAAGGGCTTCGAGCTATCGG
AAAAGGGAGCGCAGGCTGCGCAGGTAAACCTTGCCGCTAAGCTAAGCAAA
GACGGCTCTGGAAATAAGAAAGCCGGTTTTAAAGAGATATGGAGACTTCT
GCTCATTGCGCGACCCGAAGCTAGAAAGCTTGGGTTTGCTTTCTTTTTCC
TGCTCATCTCGTCATCAATCACCATGTCCGTTCCCTTCTCCATCGGCAAA
ATCATGGATGCAGCTACAAAGTCTTCTGACGAAGAAGGAGGCGGTGGAAA
CCTGCTCTTTGGCTTGAGCGTACCGATGTTCTATGGTGCTTTGGCCGGTA
TCCTGACACTGGGTGCCGCTGCGAACTATGGCCGTATTGTCATTCTCCGT
ATCGTTGGAGAGCGCATTGTCTCAAGGCTTCGCTCGAAGCTTTTCCGCAA
TACTTTTGTCCAAGATGCGGAATTCTTCGATGCGAACAGAGTGGGCGACT
TGATCTCACGACTCGGTTCTGATACCATTATTGTGGGCAAAAGTATCACG
CAGAACTTGTCGGACGGTTTGCGAGCAGCCGTCAGTGGTGCAGCAGGCTT
TGGTCTGATGACCTATGTTAGTCTCAAGCTGTCCAGTGTCTTGCTTGTGC
TGTTGCCGCCTATTGGTCTCGGAGCATTCTTCTATGGTAGGGCGATAAGG
AACCTTAGTCGCAAGATCCAGAGAAACCTCGGTACTTTGACCAAGATCGC
GGAAGAGCGTCTTGGTAATGTCAAGACTAGCCAGTCCTTTGCTGGTGAGA
TCCTTGAGGTGAACCGATACAACAACCAAGTTCGCAAGATCTTCGAGCTT
GGCAAGAGGGAATCTCTGATTAGCGCTACCTTCTTCAGTTCCGTAAGTTC
CCCCGTATTTTTGCCTTTCAATTTAGCGCCACTTAGCTGACAGCTCGATC
AGACTGGCTTCATGGGCAACATGACGATCCTTGCATTGCTTTATGTTGGA
GGCGGCATGGTTCAGTCAGGTGGCATCACGATTGGAGAGTTGACTTCCTT
CTTGATGTATACTGCTTATGCCGGTTCCAGCATGTTCGGTCTCTCTAGCT
TCTACTCCGAGCTGATGAAAGGTGTGGGAGCTGCCAGTCGTCTCTTCGAG
TTGCAGGATCGTGAGCCAACGATATCCCCAACGAAGGGAAAGAAGGTTGA
ATCGGCTCGTGGTCCTATCCGTTTTGAGAACGTGAACTTCAGCTACCCCA
CGCGACCTGCTGTTCCTATCTTCAAGGAATTGAACTTCGAGATTCCACAA
GGGAAGAATGTCGCCATCGTCGGACCTTCAGGCGGAGGAAAGTCAACCAT
TGCTTCGCTTCTACTGAGATTCTACAACCCAACCGAAGGACGTGTTCTGA
TTAATGGCCAGGACATCAGCGAGATGAACGCCAAGTCCCTCCGCAGGAAG
ATTGGTGTTGTTGCTCAGGAGCCTGTCCTGTTCTCGGGATCAATTGCTGA
GAACATCTCTTATGGCAAGCCACGGGCTACCAGGTCAGAAATCATCGCAG
CAGCCAGGAAAGCGAACTGCCAGTTTATCAGTGATTTTGTAAGTAGAAAA
CCTACCACTAGACTGTACCTTCTACTAACATGTTTCTAGCCGGATGGACT
CGACACTCAGGTTGGACCCCGCGGAGCTCAACTCTCCGGTGGACAGAAGC
AGCGCATTGCCATCGCTCGCGCTCTCATCAAGGATCCCGACATTCTGATA
CTGGATGAAGCGACCTCTGCTCTTGATGCAGAATCTGAGACATTGGTCAA
CAGCGCTCTTGCTGCCCTTCTTCGTGGAAACAACACCACCATCAGCATCG
CTCACAGACTGTCTACAATCAAGCGCTCTGATACTATCATCGTGCTTGCC
CCTGATGGAAAGGTGGCCGAGCAGGGTACCTACGAGGAGCTCAGCTCTCG
TCCTGACGGCGCCTTCACAAAGCTGATGGAATGGCAGATCAATGGTGGCG
AGAACACACCAGCAAACGCCCCCATCAGCCCAGCGACAGAAGAGAAACTG
TGGCAGTTAGAGAAAGAGGAAGCTGAAGCTGACGTCGAAGATGCCAGCAG
CGAGCGCGACCAGCAGAAGAAGTAG back to topCoding sequence (CDS) from alignment at MCQH01000066:727998..730472- >ATCC10864_003305-T1 ID=ATCC10864_003305-T1|Name=ATCC10864_003305-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=7092bp|location=Sequence derived from alignment at MCQH01000066:727998..730472- (Aspergillus niger ATCC 10864)
CCGGATGGACTCGACACTCAGGTTGGACCCCGCGGAGCTCAACTCTCCGG
TGGACAGAAGCAGCGCATTGCCATCGCTCGCGCTCTCATCAAGGATCCCG
ACATTCTGATACTGGATGAAGCGACCTCTGCTCTTGATGCAGAATCTGAG
ACATTGGTCAACAGCGCTCTTGCTGCCCTTCTTCGTGGAAACAACACCAC
CATCAGCATCGCTCACAGACTGTCTACAATCAAGCGCTCTGATACTATCA
TCGTGCTTGCCCCTGATGGAAAGGTGGCCGAGCAGGGTACCTACGAGGAG
CTCAGCTCTCGTCCTGACGGCGCCTTCACAAAGCTGATGGAATGGCAGAT
CAATGGTGGCGAGAACACACCAGCAAACGCCCCCATCAGCCCAGCGACAG
AAGAGAAACTGTGGCAGTTAGAGAAAGAGGAAGCTGAAGCTGACGTCGAA
GATGCCAGCAGCGAGCGCGACCAGCAGAAGAAGTAGACTGGCTTCATGGG
CAACATGACGATCCTTGCATTGCTTTATGTTGGAGGCGGCATGGTTCAGT
CAGGTGGCATCACGATTGGAGAGTTGACTTCCTTCTTGATGTATACTGCT
TATGCCGGTTCCAGCATGTTCGGTCTCTCTAGCTTCTACTCCGAGCTGAT
GAAAGGTGTGGGAGCTGCCAGTCGTCTCTTCGAGTTGCAGGATCGTGAGC
CAACGATATCCCCAACGAAGGGAAAGAAGGTTGAATCGGCTCGTGGTCCT
ATCCGTTTTGAGAACGTGAACTTCAGCTACCCCACGCGACCTGCTGTTCC
TATCTTCAAGGAATTGAACTTCGAGATTCCACAAGGGAAGAATGTCGCCA
TCGTCGGACCTTCAGGCGGAGGAAAGTCAACCATTGCTTCGCTTCTACTG
AGATTCTACAACCCAACCGAAGGACGTGTTCTGATTAATGGCCAGGACAT
CAGCGAGATGAACGCCAAGTCCCTCCGCAGGAAGATTGGTGTTGTTGCTC
AGGAGCCTGTCCTGTTCTCGGGATCAATTGCTGAGAACATCTCTTATGGC
AAGCCACGGGCTACCAGGTCAGAAATCATCGCAGCAGCCAGGAAAGCGAA
CTGCCAGTTTATCAGTGATTTTATGCGCGGAGCCAGGTTGCTGGCTTCCT
GGGCCCCCGGCGTCACCGCCAGACGGGGAGCTCAGGTGAATGGGAGCATA
CTCAATGAGCTCTACTTCAATGCTCGTCCACTTCAATCAGGAATTGGCAT
CTCTGGCGTCTCTAGCCGACAATTCTCGGGAATTTCGGCTTCATTACGCA
ACAACTTCTCGCTGACGTCTGGACTATCCATCCGTCAAAGTAACGGTTCA
CGGTTCGATATCATCCGGTCGCAATTAATAGCGCAATCTCGGTGCTTCTC
CTCGTCGCAACGGTCATTGGAATCCAAGCCAGTGAACTCATCGACTAAAT
CTGCTCAAACGAATAACGCCACGGCTCAAGACAAGGAAGATGAAGACATA
GACAAGGGCTTCGAGCTATCGGAAAAGGGAGCGCAGGCTGCGCAGGTAAA
CCTTGCCGCTAAGCTAAGCAAAGACGGCTCTGGAAATAAGAAAGCCGGTT
TTAAAGAGATATGGAGACTTCTGCTCATTGCGCGACCCGAAGCTAGAAAG
CTTGGGTTTGCTTTCTTTTTCCTGCTCATCTCGTCATCAATCACCATGTC
CGTTCCCTTCTCCATCGGCAAAATCATGGATGCAGCTACAAAGTCTTCTG
ACGAAGAAGGAGGCGGTGGAAACCTGCTCTTTGGCTTGAGCGTACCGATG
TTCTATGGTGCTTTGGCCGGTATCCTGACACTGGGTGCCGCTGCGAACTA
TGGCCGTATTGTCATTCTCCGTATCGTTGGAGAGCGCATTGTCTCAAGGC
TTCGCTCGAAGCTTTTCCGCAATACTTTTGTCCAAGATGCGGAATTCTTC
GATGCGAACAGAGTGGGCGACTTGATCTCACGACTCGGTTCTGATACCAT
TATTGTGGGCAAAAGTATCACGCAGAACTTGTCGGACGGTTTGCGAGCAG
CCGTCAGTGGTGCAGCAGGCTTTGGTCTGATGACCTATGTTAGTCTCAAG
CTGTCCAGTGTCTTGCTTGTGCTGTTGCCGCCTATTGGTCTCGGAGCATT
CTTCTATGGTAGGGCGATAAGGAACCTTAGTCGCAAGATCCAGAGAAACC
TCGGTACTTTGACCAAGATCGCGGAAGAGCGTCTTGGTAATGTCAAGACT
AGCCAGTCCTTTGCTGGTGAGATCCTTGAGGTGAACCGATACAACAACCA
AGTTCGCAAGATCTTCGAGCTTGGCAAGAGGGAATCTCTGATTAGCGCTA
CCTTCTTCAGTTCCCCGGATGGACTCGACACTCAGGTTGGACCCCGCGGA
GCTCAACTCTCCGGTGGACAGAAGCAGCGCATTGCCATCGCTCGCGCTCT
CATCAAGGATCCCGACATTCTGATACTGGATGAAGCGACCTCTGCTCTTG
ATGCAGAATCTGAGACATTGGTCAACAGCGCTCTTGCTGCCCTTCTTCGT
GGAAACAACACCACCATCAGCATCGCTCACAGACTGTCTACAATCAAGCG
CTCTGATACTATCATCGTGCTTGCCCCTGATGGAAAGGTGGCCGAGCAGG
GTACCTACGAGGAGCTCAGCTCTCGTCCTGACGGCGCCTTCACAAAGCTG
ATGGAATGGCAGATCAATGGTGGCGAGAACACACCAGCAAACGCCCCCAT
CAGCCCAGCGACAGAAGAGAAACTGTGGCAGTTAGAGAAAGAGGAAGCTG
AAGCTGACGTCGAAGATGCCAGCAGCGAGCGCGACCAGCAGAAGAAGTAG
ACTGGCTTCATGGGCAACATGACGATCCTTGCATTGCTTTATGTTGGAGG
CGGCATGGTTCAGTCAGGTGGCATCACGATTGGAGAGTTGACTTCCTTCT
TGATGTATACTGCTTATGCCGGTTCCAGCATGTTCGGTCTCTCTAGCTTC
TACTCCGAGCTGATGAAAGGTGTGGGAGCTGCCAGTCGTCTCTTCGAGTT
GCAGGATCGTGAGCCAACGATATCCCCAACGAAGGGAAAGAAGGTTGAAT
CGGCTCGTGGTCCTATCCGTTTTGAGAACGTGAACTTCAGCTACCCCACG
CGACCTGCTGTTCCTATCTTCAAGGAATTGAACTTCGAGATTCCACAAGG
GAAGAATGTCGCCATCGTCGGACCTTCAGGCGGAGGAAAGTCAACCATTG
CTTCGCTTCTACTGAGATTCTACAACCCAACCGAAGGACGTGTTCTGATT
AATGGCCAGGACATCAGCGAGATGAACGCCAAGTCCCTCCGCAGGAAGAT
TGGTGTTGTTGCTCAGGAGCCTGTCCTGTTCTCGGGATCAATTGCTGAGA
ACATCTCTTATGGCAAGCCACGGGCTACCAGGTCAGAAATCATCGCAGCA
GCCAGGAAAGCGAACTGCCAGTTTATCAGTGATTTTATGCGCGGAGCCAG
GTTGCTGGCTTCCTGGGCCCCCGGCGTCACCGCCAGACGGGGAGCTCAGG
TGAATGGGAGCATACTCAATGAGCTCTACTTCAATGCTCGTCCACTTCAA
TCAGGAATTGGCATCTCTGGCGTCTCTAGCCGACAATTCTCGGGAATTTC
GGCTTCATTACGCAACAACTTCTCGCTGACGTCTGGACTATCCATCCGTC
AAAGTAACGGTTCACGGTTCGATATCATCCGGTCGCAATTAATAGCGCAA
TCTCGGTGCTTCTCCTCGTCGCAACGGTCATTGGAATCCAAGCCAGTGAA
CTCATCGACTAAATCTGCTCAAACGAATAACGCCACGGCTCAAGACAAGG
AAGATGAAGACATAGACAAGGGCTTCGAGCTATCGGAAAAGGGAGCGCAG
GCTGCGCAGGTAAACCTTGCCGCTAAGCTAAGCAAAGACGGCTCTGGAAA
TAAGAAAGCCGGTTTTAAAGAGATATGGAGACTTCTGCTCATTGCGCGAC
CCGAAGCTAGAAAGCTTGGGTTTGCTTTCTTTTTCCTGCTCATCTCGTCA
TCAATCACCATGTCCGTTCCCTTCTCCATCGGCAAAATCATGGATGCAGC
TACAAAGTCTTCTGACGAAGAAGGAGGCGGTGGAAACCTGCTCTTTGGCT
TGAGCGTACCGATGTTCTATGGTGCTTTGGCCGGTATCCTGACACTGGGT
GCCGCTGCGAACTATGGCCGTATTGTCATTCTCCGTATCGTTGGAGAGCG
CATTGTCTCAAGGCTTCGCTCGAAGCTTTTCCGCAATACTTTTGTCCAAG
ATGCGGAATTCTTCGATGCGAACAGAGTGGGCGACTTGATCTCACGACTC
GGTTCTGATACCATTATTGTGGGCAAAAGTATCACGCAGAACTTGTCGGA
CGGTTTGCGAGCAGCCGTCAGTGGTGCAGCAGGCTTTGGTCTGATGACCT
ATGTTAGTCTCAAGCTGTCCAGTGTCTTGCTTGTGCTGTTGCCGCCTATT
GGTCTCGGAGCATTCTTCTATGGTAGGGCGATAAGGAACCTTAGTCGCAA
GATCCAGAGAAACCTCGGTACTTTGACCAAGATCGCGGAAGAGCGTCTTG
GTAATGTCAAGACTAGCCAGTCCTTTGCTGGTGAGATCCTTGAGGTGAAC
CGATACAACAACCAAGTTCGCAAGATCTTCGAGCTTGGCAAGAGGGAATC
TCTGATTAGCGCTACCTTCTTCAGTTCCCCGGATGGACTCGACACTCAGG
TTGGACCCCGCGGAGCTCAACTCTCCGGTGGACAGAAGCAGCGCATTGCC
ATCGCTCGCGCTCTCATCAAGGATCCCGACATTCTGATACTGGATGAAGC
GACCTCTGCTCTTGATGCAGAATCTGAGACATTGGTCAACAGCGCTCTTG
CTGCCCTTCTTCGTGGAAACAACACCACCATCAGCATCGCTCACAGACTG
TCTACAATCAAGCGCTCTGATACTATCATCGTGCTTGCCCCTGATGGAAA
GGTGGCCGAGCAGGGTACCTACGAGGAGCTCAGCTCTCGTCCTGACGGCG
CCTTCACAAAGCTGATGGAATGGCAGATCAATGGTGGCGAGAACACACCA
GCAAACGCCCCCATCAGCCCAGCGACAGAAGAGAAACTGTGGCAGTTAGA
GAAAGAGGAAGCTGAAGCTGACGTCGAAGATGCCAGCAGCGAGCGCGACC
AGCAGAAGAAGTAGACTGGCTTCATGGGCAACATGACGATCCTTGCATTG
CTTTATGTTGGAGGCGGCATGGTTCAGTCAGGTGGCATCACGATTGGAGA
GTTGACTTCCTTCTTGATGTATACTGCTTATGCCGGTTCCAGCATGTTCG
GTCTCTCTAGCTTCTACTCCGAGCTGATGAAAGGTGTGGGAGCTGCCAGT
CGTCTCTTCGAGTTGCAGGATCGTGAGCCAACGATATCCCCAACGAAGGG
AAAGAAGGTTGAATCGGCTCGTGGTCCTATCCGTTTTGAGAACGTGAACT
TCAGCTACCCCACGCGACCTGCTGTTCCTATCTTCAAGGAATTGAACTTC
GAGATTCCACAAGGGAAGAATGTCGCCATCGTCGGACCTTCAGGCGGAGG
AAAGTCAACCATTGCTTCGCTTCTACTGAGATTCTACAACCCAACCGAAG
GACGTGTTCTGATTAATGGCCAGGACATCAGCGAGATGAACGCCAAGTCC
CTCCGCAGGAAGATTGGTGTTGTTGCTCAGGAGCCTGTCCTGTTCTCGGG
ATCAATTGCTGAGAACATCTCTTATGGCAAGCCACGGGCTACCAGGTCAG
AAATCATCGCAGCAGCCAGGAAAGCGAACTGCCAGTTTATCAGTGATTTT
ATGCGCGGAGCCAGGTTGCTGGCTTCCTGGGCCCCCGGCGTCACCGCCAG
ACGGGGAGCTCAGGTGAATGGGAGCATACTCAATGAGCTCTACTTCAATG
CTCGTCCACTTCAATCAGGAATTGGCATCTCTGGCGTCTCTAGCCGACAA
TTCTCGGGAATTTCGGCTTCATTACGCAACAACTTCTCGCTGACGTCTGG
ACTATCCATCCGTCAAAGTAACGGTTCACGGTTCGATATCATCCGGTCGC
AATTAATAGCGCAATCTCGGTGCTTCTCCTCGTCGCAACGGTCATTGGAA
TCCAAGCCAGTGAACTCATCGACTAAATCTGCTCAAACGAATAACGCCAC
GGCTCAAGACAAGGAAGATGAAGACATAGACAAGGGCTTCGAGCTATCGG
AAAAGGGAGCGCAGGCTGCGCAGGTAAACCTTGCCGCTAAGCTAAGCAAA
GACGGCTCTGGAAATAAGAAAGCCGGTTTTAAAGAGATATGGAGACTTCT
GCTCATTGCGCGACCCGAAGCTAGAAAGCTTGGGTTTGCTTTCTTTTTCC
TGCTCATCTCGTCATCAATCACCATGTCCGTTCCCTTCTCCATCGGCAAA
ATCATGGATGCAGCTACAAAGTCTTCTGACGAAGAAGGAGGCGGTGGAAA
CCTGCTCTTTGGCTTGAGCGTACCGATGTTCTATGGTGCTTTGGCCGGTA
TCCTGACACTGGGTGCCGCTGCGAACTATGGCCGTATTGTCATTCTCCGT
ATCGTTGGAGAGCGCATTGTCTCAAGGCTTCGCTCGAAGCTTTTCCGCAA
TACTTTTGTCCAAGATGCGGAATTCTTCGATGCGAACAGAGTGGGCGACT
TGATCTCACGACTCGGTTCTGATACCATTATTGTGGGCAAAAGTATCACG
CAGAACTTGTCGGACGGTTTGCGAGCAGCCGTCAGTGGTGCAGCAGGCTT
TGGTCTGATGACCTATGTTAGTCTCAAGCTGTCCAGTGTCTTGCTTGTGC
TGTTGCCGCCTATTGGTCTCGGAGCATTCTTCTATGGTAGGGCGATAAGG
AACCTTAGTCGCAAGATCCAGAGAAACCTCGGTACTTTGACCAAGATCGC
GGAAGAGCGTCTTGGTAATGTCAAGACTAGCCAGTCCTTTGCTGGTGAGA
TCCTTGAGGTGAACCGATACAACAACCAAGTTCGCAAGATCTTCGAGCTT
GGCAAGAGGGAATCTCTGATTAGCGCTACCTTCTTCAGTTCC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0042626 | ATPase-coupled transmembrane transporter activity |
| GO:0005524 | ATP binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR017871 |
| InterPro | IPR003439 |
| InterPro | IPR027417 |
| InterPro | IPR039421 |
| PFAM | PF00005 |
| InterPro | IPR011527 |
| InterPro | IPR003593 |
| InterPro | IPR036640 |
| PFAM | PF00664 |
Properties
| Property Name | Value |
|---|
| Product | multidrug-resistance transporter mdr2 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000066 | supercontig | MCQH01000066:727998..730472 - |
|
