You are here

Home

ATCC10864_003310-T1, ATCC10864_003310-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003310-T1
Unique NameATCC10864_003310-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000066:739482..740372+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003310-T1 ID=ATCC10864_003310-T1|Name=ATCC10864_003310-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=891bp|location=Sequence derived from alignment at MCQH01000066:739482..740372+ (Aspergillus niger ATCC 10864)
ATGGTATGTGCCTTCTTCCTCGCTGTCCCGGCCAGTTGTGTTGAAAATCC
CCCACTTTGCGGGGCAGATCTGCCTGGCATTCTCAACAGGATTGCTGACA
TCGCATCGTCTAGGCCGACTCTCTGACCGAAGAGCAAGTTTCTGAGTACA
AGGAGGCCTTCTCCCTCTTTGTGAGTGCTCCCTGAATGACCCTCCGATCA
TCCTGATCGATGAGCTATCTTTACCGGAGCATAATGCTAATGTGTTTTCG
GACTTAATAGGACAAGGATGGCGATGGTGGGTGGAATTCTATCCCCTTCA
CATTATACCTGTAGCGCTCGATCCGACTGCGGGATTTCGACAGCATTTTC
CAGAACGATTTGGATCATAATACTAATTTAAATCGGTGAATCAGGCCAGA
TCACCACCAAGGAGCTCGGCACTGTGATGCGCTCCCTTGGCCAGAACCCC
TCCGAGTCTGAGCTTCAGGACATGATCAACGAGGTTGACGCTGACAACAA
CGGAACGATCGACTTCCCCGGTATGTGTTAGATTTACGCCTGTAAGGCGG
AAATGCGGGCTGGATTGTGATTGACTTTTGCCGCCAGAATTCCTTACCAT
GATGGCTCGTAAGATGAAGGACACCGACTCCGAGGAGGAAATCCGCGAGG
CTTTCAAGGTCTTCGACCGCGACAACAATGGTTTTATCTCCGCCGCGGAG
CTGCGCCACGTCATGACCTCCATTGGCGAGAAGCTCACCGACGACGAAGT
CGATGAGATGATCCGTGAGGCGGACCAGGACGGTGATGGCCGCATCGACT
GTATGTTTACCATGCCCGATTATACTCATAACATAACATACTGACTCTGC
TACCAGACAACGAGTTCGTCCAGCTCATGATGCAAAAATAA
back to top

Coding sequence (CDS) from alignment at MCQH01000066:739482..740372+

>ATCC10864_003310-T1 ID=ATCC10864_003310-T1|Name=ATCC10864_003310-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2700bp|location=Sequence derived from alignment at MCQH01000066:739482..740372+ (Aspergillus niger ATCC 10864)
ATGGCCGACTCTCTGACCGAAGAGCAAGTTTCTGAGTACAAGGAGGCCTT
CTCCCTCTTTGACAAGGATGGCGATGGCCAGATCACCACCAAGGAGCTCG
GCACTGTGATGCGCTCCCTTGGCCAGAACCCCTCCGAGTCTGAGCTTCAG
GACATGATCAACGAGGTTGACGCTGACAACAACGGAACGATCGACTTCCC
CGAATTCCTTACCATGATGGCTCGTAAGATGAAGGACACCGACTCCGAGG
AGGAAATCCGCGAGGCTTTCAAGGTCTTCGACCGCGACAACAATGGTTTT
ATCTCCGCCGCGGAGCTGCGCCACGTCATGACCTCCATTGGCGAGAAGCT
CACCGACGACGAAGTCGATGAGATGATCCGTGAGGCGGACCAGGACGGTG
ATGGCCGCATCGACTACAACGAGTTCGTCCAGCTCATGATGCAAAAATAA
ATGGCCGACTCTCTGACCGAAGAGCAAGTTTCTGAGTACAAGGAGGCCTT
CTCCCTCTTTGACAAGGATGGCGATGGCCAGATCACCACCAAGGAGCTCG
GCACTGTGATGCGCTCCCTTGGCCAGAACCCCTCCGAGTCTGAGCTTCAG
GACATGATCAACGAGGTTGACGCTGACAACAACGGAACGATCGACTTCCC
CGAATTCCTTACCATGATGGCTCGTAAGATGAAGGACACCGACTCCGAGG
AGGAAATCCGCGAGGCTTTCAAGGTCTTCGACCGCGACAACAATGGTTTT
ATCTCCGCCGCGGAGCTGCGCCACGTCATGACCTCCATTGGCGAGAAGCT
CACCGACGACGAAGTCGATGAGATGATCCGTGAGGCGGACCAGGACGGTG
ATGGCCGCATCGACTACAACGAGTTCGTCCAGCTCATGATGCAAAAATAA
ATGGCCGACTCTCTGACCGAAGAGCAAGTTTCTGAGTACAAGGAGGCCTT
CTCCCTCTTTGACAAGGATGGCGATGGCCAGATCACCACCAAGGAGCTCG
GCACTGTGATGCGCTCCCTTGGCCAGAACCCCTCCGAGTCTGAGCTTCAG
GACATGATCAACGAGGTTGACGCTGACAACAACGGAACGATCGACTTCCC
CGAATTCCTTACCATGATGGCTCGTAAGATGAAGGACACCGACTCCGAGG
AGGAAATCCGCGAGGCTTTCAAGGTCTTCGACCGCGACAACAATGGTTTT
ATCTCCGCCGCGGAGCTGCGCCACGTCATGACCTCCATTGGCGAGAAGCT
CACCGACGACGAAGTCGATGAGATGATCCGTGAGGCGGACCAGGACGGTG
ATGGCCGCATCGACTACAACGAGTTCGTCCAGCTCATGATGCAAAAATAA
ATGGCCGACTCTCTGACCGAAGAGCAAGTTTCTGAGTACAAGGAGGCCTT
CTCCCTCTTTGACAAGGATGGCGATGGCCAGATCACCACCAAGGAGCTCG
GCACTGTGATGCGCTCCCTTGGCCAGAACCCCTCCGAGTCTGAGCTTCAG
GACATGATCAACGAGGTTGACGCTGACAACAACGGAACGATCGACTTCCC
CGAATTCCTTACCATGATGGCTCGTAAGATGAAGGACACCGACTCCGAGG
AGGAAATCCGCGAGGCTTTCAAGGTCTTCGACCGCGACAACAATGGTTTT
ATCTCCGCCGCGGAGCTGCGCCACGTCATGACCTCCATTGGCGAGAAGCT
CACCGACGACGAAGTCGATGAGATGATCCGTGAGGCGGACCAGGACGGTG
ATGGCCGCATCGACTACAACGAGTTCGTCCAGCTCATGATGCAAAAATAA
ATGGCCGACTCTCTGACCGAAGAGCAAGTTTCTGAGTACAAGGAGGCCTT
CTCCCTCTTTGACAAGGATGGCGATGGCCAGATCACCACCAAGGAGCTCG
GCACTGTGATGCGCTCCCTTGGCCAGAACCCCTCCGAGTCTGAGCTTCAG
GACATGATCAACGAGGTTGACGCTGACAACAACGGAACGATCGACTTCCC
CGAATTCCTTACCATGATGGCTCGTAAGATGAAGGACACCGACTCCGAGG
AGGAAATCCGCGAGGCTTTCAAGGTCTTCGACCGCGACAACAATGGTTTT
ATCTCCGCCGCGGAGCTGCGCCACGTCATGACCTCCATTGGCGAGAAGCT
CACCGACGACGAAGTCGATGAGATGATCCGTGAGGCGGACCAGGACGGTG
ATGGCCGCATCGACTACAACGAGTTCGTCCAGCTCATGATGCAAAAATAA
ATGGCCGACTCTCTGACCGAAGAGCAAGTTTCTGAGTACAAGGAGGCCTT
CTCCCTCTTTGACAAGGATGGCGATGGCCAGATCACCACCAAGGAGCTCG
GCACTGTGATGCGCTCCCTTGGCCAGAACCCCTCCGAGTCTGAGCTTCAG
GACATGATCAACGAGGTTGACGCTGACAACAACGGAACGATCGACTTCCC
CGAATTCCTTACCATGATGGCTCGTAAGATGAAGGACACCGACTCCGAGG
AGGAAATCCGCGAGGCTTTCAAGGTCTTCGACCGCGACAACAATGGTTTT
ATCTCCGCCGCGGAGCTGCGCCACGTCATGACCTCCATTGGCGAGAAGCT
CACCGACGACGAAGTCGATGAGATGATCCGTGAGGCGGACCAGGACGGTG
ATGGCCGCATCGACTACAACGAGTTCGTCCAGCTCATGATGCAAAAATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0019722calcium-mediated signaling
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAM1ATCC10864_003310Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003310-T1ATCC10864_003310-T1-proteinAspergillus niger ATCC 10864polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003310-T1.exon1ATCC10864_003310-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_003310-T1.exon2ATCC10864_003310-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003310-T1.exon3ATCC10864_003310-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_003310-T1.exon4ATCC10864_003310-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_003310-T1.exon5ATCC10864_003310-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_003310-T1.exon6ATCC10864_003310-T1.exon6Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003310-T1.cdsATCC10864_003310-T1.cdsAspergillus niger ATCC 10864CDS


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR018247
PFAMPF13405
InterProIPR002048
PFAMPF13202
PFAMPF13499
InterProIPR011992
PFAMPF13833
PFAMPF14658
PFAMPF08726
InterProIPR039030
PFAMPF00036
Properties
Property NameValue
Producttranslation elongation factor EF1B gamma
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000066supercontigMCQH01000066:739482..740372 +
Powered by Drupal