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ATCC10864_003311-T1, ATCC10864_003311-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003311-T1
Unique NameATCC10864_003311-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000066:741126..742180-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003311-T1 ID=ATCC10864_003311-T1|Name=ATCC10864_003311-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1055bp|location=Sequence derived from alignment at MCQH01000066:741126..742180- (Aspergillus niger ATCC 10864)
ATGCCTATCACAGGGTAAGCGCTGATCAGTCATCACATATACTCACATCA
TGCTGACTCCAACCAACCAGAGTCTACTTCATCCCCTCCAACCCAAATGC
ATCCACAGGGCTAGCGACTATCACAGAGCGCCTACACACAGCCCTAGCAG
ACGAGCCAACATTAGTAGGCCGTTGGTTCCTCGAACACCGACTAATGCGC
GATACTCCATCATGTGTTCCTGCCTCAGCATCCCAGCGCCAAGTACAACC
GCGCTATATGCAATTCCTATCACTGTCTTTTCACTCTAACCACGGCTTCA
TCTACACCTCTGAAGCACTAGAGAAAAGCACTCATCATTCCACCACCAGT
GTTAGCACCACGCCAGCTGGCTCACCCACCAATTCTACTGCTCAAAGTGG
AGCTCCAGGCGCAACAGCGCCCACCCCTTCCACCCCATCTAATGCTGCTG
CACAGTCAGGAGGACCAATGGTGATGACCACCGTGCCGCTTCCATCCTGT
AATGCACTTTTCCAGCACTTCGGCTACGCCTGCCAGCCTTTCTGGTGCCA
TCGACACACGGTAACCGTACCAGGCGGTGTGGTCTACGATGTGGGCGATT
TCCGAGTCCGAGTGGGTGATGTACGACAGACTCAGCCAGCAGCGAGGGTG
CGCGGAACAGTTGTGGAAATTGAATGGCGGGGTCCGTGCATAGTTGATGC
GATTTCAGCACCACGGAATTCGAGCGACGGACAAATAGCTGATGATGGCG
ACTCCGGGATTGATATGGCGTTCCCGGATGCTATTGAAGACGCGGATATT
GATGCAGAGTATGCGGCTAGTGCGGCGTTGATTAGGGAGTTCTGGGCGAG
ACTCGGCATTGAAGGAGCCAGAGAAGCTATTTTGTTGCCGGATGTAGGCA
AGGAAGCCAAGGATCGGTTGAGGAGATTGAAGCAGAAGGGCCGAAATACT
GTTTCTAACGAGGCGAGTCTACAGCAAGCGGAGGAGGATCCGGATCCGGA
TGCGGGTGTGGATGTGGCGAGGCAGTTTATGGAGATTTTTAGGTTTAATC
GGTAA
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Coding sequence (CDS) from alignment at MCQH01000066:741126..742180-

>ATCC10864_003311-T1 ID=ATCC10864_003311-T1|Name=ATCC10864_003311-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1998bp|location=Sequence derived from alignment at MCQH01000066:741126..742180- (Aspergillus niger ATCC 10864)
AGTCTACTTCATCCCCTCCAACCCAAATGCATCCACAGGGCTAGCGACTA
TCACAGAGCGCCTACACACAGCCCTAGCAGACGAGCCAACATTAGTAGGC
CGTTGGTTCCTCGAACACCGACTAATGCGCGATACTCCATCATGTGTTCC
TGCCTCAGCATCCCAGCGCCAAGTACAACCGCGCTATATGCAATTCCTAT
CACTGTCTTTTCACTCTAACCACGGCTTCATCTACACCTCTGAAGCACTA
GAGAAAAGCACTCATCATTCCACCACCAGTGTTAGCACCACGCCAGCTGG
CTCACCCACCAATTCTACTGCTCAAAGTGGAGCTCCAGGCGCAACAGCGC
CCACCCCTTCCACCCCATCTAATGCTGCTGCACAGTCAGGAGGACCAATG
GTGATGACCACCGTGCCGCTTCCATCCTGTAATGCACTTTTCCAGCACTT
CGGCTACGCCTGCCAGCCTTTCTGGTGCCATCGACACACGGTAACCGTAC
CAGGCGGTGTGGTCTACGATGTGGGCGATTTCCGAGTCCGAGTGGGTGAT
GTACGACAGACTCAGCCAGCAGCGAGGGTGCGCGGAACAGTTGTGGAAAT
TGAATGGCGGGGTCCGTGCATAGTTGATGCGATTTCAGCACCACGGAATT
CGAGCGACGGACAAATAGCTGATGATGGCGACTCCGGGATTGATATGGCG
TTCCCGGATGCTATTGAAGACGCGGATATTGATGCAGAGTATGCGGCTAG
TGCGGCGTTGATTAGGGAGTTCTGGGCGAGACTCGGCATTGAAGGAGCCA
GAGAAGCTATTTTGTTGCCGGATGTAGGCAAGGAAGCCAAGGATCGGTTG
AGGAGATTGAAGCAGAAGGGCCGAAATACTGTTTCTAACGAGGCGAGTCT
ACAGCAAGCGGAGGAGGATCCGGATCCGGATGCGGGTGTGGATGTGGCGA
GGCAGTTTATGGAGATTTTTAGGTTTAATCGGTAAATGCCTATCACAGGA
GTCTACTTCATCCCCTCCAACCCAAATGCATCCACAGGGCTAGCGACTAT
CACAGAGCGCCTACACACAGCCCTAGCAGACGAGCCAACATTAGTAGGCC
GTTGGTTCCTCGAACACCGACTAATGCGCGATACTCCATCATGTGTTCCT
GCCTCAGCATCCCAGCGCCAAGTACAACCGCGCTATATGCAATTCCTATC
ACTGTCTTTTCACTCTAACCACGGCTTCATCTACACCTCTGAAGCACTAG
AGAAAAGCACTCATCATTCCACCACCAGTGTTAGCACCACGCCAGCTGGC
TCACCCACCAATTCTACTGCTCAAAGTGGAGCTCCAGGCGCAACAGCGCC
CACCCCTTCCACCCCATCTAATGCTGCTGCACAGTCAGGAGGACCAATGG
TGATGACCACCGTGCCGCTTCCATCCTGTAATGCACTTTTCCAGCACTTC
GGCTACGCCTGCCAGCCTTTCTGGTGCCATCGACACACGGTAACCGTACC
AGGCGGTGTGGTCTACGATGTGGGCGATTTCCGAGTCCGAGTGGGTGATG
TACGACAGACTCAGCCAGCAGCGAGGGTGCGCGGAACAGTTGTGGAAATT
GAATGGCGGGGTCCGTGCATAGTTGATGCGATTTCAGCACCACGGAATTC
GAGCGACGGACAAATAGCTGATGATGGCGACTCCGGGATTGATATGGCGT
TCCCGGATGCTATTGAAGACGCGGATATTGATGCAGAGTATGCGGCTAGT
GCGGCGTTGATTAGGGAGTTCTGGGCGAGACTCGGCATTGAAGGAGCCAG
AGAAGCTATTTTGTTGCCGGATGTAGGCAAGGAAGCCAAGGATCGGTTGA
GGAGATTGAAGCAGAAGGGCCGAAATACTGTTTCTAACGAGGCGAGTCTA
CAGCAAGCGGAGGAGGATCCGGATCCGGATGCGGGTGTGGATGTGGCGAG
GCAGTTTATGGAGATTTTTAGGTTTAATCGGTAAATGCCTATCACAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003712transcription coregulator activity
Vocabulary: Cellular Component
TermDefinition
GO:0016592mediator complex
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription by RNA polymerase II
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003311ATCC10864_003311Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003311-T1ATCC10864_003311-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003311-T1.cdsATCC10864_003311-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003311-T1.exon2ATCC10864_003311-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003311-T1.exon1ATCC10864_003311-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF08612
InterProIPR013921
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000066supercontigMCQH01000066:741126..742180 -
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