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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000066:797503..799664+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_003322-T1 ID=ATCC10864_003322-T1|Name=ATCC10864_003322-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2162bp|location=Sequence derived from alignment at MCQH01000066:797503..799664+ (Aspergillus niger ATCC 10864)
ATGGCTGCCCAGTCGCTGAGCTCGTTGCTGCAACGAGCATCCATTGACGA
CCACGAGGAAGTCCTGCAGTCATGCAATGCCGCGTTGGCCAAGTCGAAGT
CGGACTTGCATGCTCAGCATATCAAGGCAGTTGCTCTGCTGAAGCTTGAC
CGCTATGAGGACTGCCTGCGAGTATTCGAAGAAGCCGGTGATGGTCTGAA
GAAGAGAGCAGCTCTGGAATACGCCTACGCTCTATATAAATGCGGTCAGC
TGGACCCGGCGATTGAGGTGGTATCTCGCGTCGCTGGTGAGAGGGGCGCA
CTACATTTGGAGGCTCAAGCCGTACGTTATTGCTTCCCATAAGCATATCT
ACTCCCAGACATCTTCTGTCATAGTCTGTCCGCTCATCCTAACTCTCATC
TTCCTTAAAGAGCTACCGTTCAGAGAAATTCCGTCGCGCTGCCGAGATTT
ACGAAGAATTGTCCAAAGGCGATGCGTCCCTGTCGAACGAAGAGAACGAC
TTGCGCACCAACTCATGGGCCACGGATGCACAGCTGCAGTGGAAGGGCTA
CCCCCAGTTTGTACGCCATAACAGGCCGATGCGGGATGATCTAGAGGCGT
TCGAGACTGTCTATAACGCAGCTTGCTTGAGTATCGCCAAGGGCGAGTTC
CAGCAGGGGCAAGTTCTATTGACTCGGGCTAAAGGTTCGTGTGGTCAACC
CCGGATGGCGCACAAGAATGGTAGCTGATTAGCTTCACACAGAGCTCTGT
CGGACGTCGGAGGACCTCACCCCTGAAGATCGGGCTGCAGAGCTGCTCCC
GATTGCCGTGCAGCAGTTGTACGTCTTGCTTCGCCAAGGGAAGTCGGAGG
AAGCACAGTCTGTTCTGGAGGAAATTTCCGTTAGCGAGTATGGTTGTCAC
AAAACCTGGTTGACCTTGAACGTCTGAAGCTCACAAAATTTGATAGTATC
CCTGAGCTCTCGACGAAGAAGATCGCGCAGACCAACATCACGCTTGCCCG
TGGCACGACCACTACCAATCCCTTCGCTCTATACAAGGCTCTTCACGAGA
TCCCCGATTCCACCGACAGCGACAAGCTCTTCGAATACCAGGATAACCTC
GCGACGGGGAACTCATATGCGGCAGACCTCCTCGTTCAGAAATACGATGG
CATTATCCGCTCCACCTCCAAGGCGCTCGCTCAAGCTGCCTACCCCTCGA
CGGAACCTCGTGCCAATCTGCTATCAGTCTACAACGCTGCCGCTCACGCA
CGCGGAGAAACAGGCACCAAGGCCTTGAAGCGGATACTATCTGCGCTCGA
CAAACGGCCCAAGGACCTTGGCCTCGCCCTCACAGCCGTCCAGCTCTACG
TGGGTGCGGGCAACACGACGTCCGCGATCACAACTCTAGAGCGGACCCTG
CAACTGCTTGACGAGTCCATCTCCGAGCAAGACAAAGCAGTCCGCTTCAA
TCCCGGCCTCTTGAGCATCCTCGTATCCCTCTACAAGTTGGAGGGCCGTA
AAGTCCAAATCCGGACCGAACTCGCCAAAGCCGCAACATACTGGCAGGCC
CAAGCCGCCGAACCACCAGCCTCCCTGCTCCGCGCCGCAGGAGCATCCCT
CCTGCATTCCTCCGATCGCTCCGACCTAGCCAAAGCGGGCGACCTTTTCA
AGTCTCTCTACCAGAAAGACACGACCGACCAGTTCGCCGTAGCCGGCTAC
GTCGCCTCCCAGGCAACGCTCGACTACTCCAAGGTAGAAGCACAGGTCGA
CACTCTCCCCTCCGTCGCCGACCTGATCTCAGGCGTCAACATCGCCTCCC
TCGAAAATGCCGGCATCTCCCCCTCCTCCGCGGCCAACGCCGCCGCCGCC
GCAGCCATGGCCGGCGCGCGGAAGAGAAGCGCCAAGGATAAGGAAGATCG
CGCAACCAAGCGTGTTCGCAAGGACCGTCTGCCCAAGGATTACGACCCCA
GCAAGACCCCCGACCCAGAGCGTTGGCTGCCTCTTCGCGATCGGTCTTCG
TACCGCCCCAAGGGCCGCAAGGGTAAGCAGCGCGCTGCGGAGCGGACACA
GGGTGGTGTGGTGAACGAGAAGGCTGAAGAGTCCCCGGCTCCTCCCACTC
AGAAGGCTCAAGGAGGTGGTGGTGGCAGCTCGAAGAAGAATAAGAAGAAG
GGCAAGCGGTAG back to topCoding sequence (CDS) from alignment at MCQH01000066:797503..799664+ >ATCC10864_003322-T1 ID=ATCC10864_003322-T1|Name=ATCC10864_003322-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=7824bp|location=Sequence derived from alignment at MCQH01000066:797503..799664+ (Aspergillus niger ATCC 10864)
ATGGCTGCCCAGTCGCTGAGCTCGTTGCTGCAACGAGCATCCATTGACGA
CCACGAGGAAGTCCTGCAGTCATGCAATGCCGCGTTGGCCAAGTCGAAGT
CGGACTTGCATGCTCAGCATATCAAGGCAGTTGCTCTGCTGAAGCTTGAC
CGCTATGAGGACTGCCTGCGAGTATTCGAAGAAGCCGGTGATGGTCTGAA
GAAGAGAGCAGCTCTGGAATACGCCTACGCTCTATATAAATGCGGTCAGC
TGGACCCGGCGATTGAGGTGGTATCTCGCGTCGCTGGTGAGAGGGGCGCA
CTACATTTGGAGGCTCAAGCCAGCTACCGTTCAGAGAAATTCCGTCGCGC
TGCCGAGATTTACGAAGAATTGTCCAAAGGCGATGCGTCCCTGTCGAACG
AAGAGAACGACTTGCGCACCAACTCATGGGCCACGGATGCACAGCTGCAG
TGGAAGGGCTACCCCCAGTTTGTACGCCATAACAGGCCGATGCGGGATGA
TCTAGAGGCGTTCGAGACTGTCTATAACGCAGCTTGCTTGAGTATCGCCA
AGGGCGAGTTCCAGCAGGGGCAAGTTCTATTGACTCGGGCTAAAGAGCTC
TGTCGGACGTCGGAGGACCTCACCCCTGAAGATCGGGCTGCAGAGCTGCT
CCCGATTGCCGTGCAGCAGTTGTACGTCTTGCTTCGCCAAGGGAAGTCGG
AGGAAGCACAGTCTGTTCTGGAGGAAATTTCCGTTAGCGATATCCCTGAG
CTCTCGACGAAGAAGATCGCGCAGACCAACATCACGCTTGCCCGTGGCAC
GACCACTACCAATCCCTTCGCTCTATACAAGGCTCTTCACGAGATCCCCG
ATTCCACCGACAGCGACAAGCTCTTCGAATACCAGGATAACCTCGCGACG
GGGAACTCATATGCGGCAGACCTCCTCGTTCAGAAATACGATGGCATTAT
CCGCTCCACCTCCAAGGCGCTCGCTCAAGCTGCCTACCCCTCGACGGAAC
CTCGTGCCAATCTGCTATCAGTCTACAACGCTGCCGCTCACGCACGCGGA
GAAACAGGCACCAAGGCCTTGAAGCGGATACTATCTGCGCTCGACAAACG
GCCCAAGGACCTTGGCCTCGCCCTCACAGCCGTCCAGCTCTACGTGGGTG
CGGGCAACACGACGTCCGCGATCACAACTCTAGAGCGGACCCTGCAACTG
CTTGACGAGTCCATCTCCGAGCAAGACAAAGCAGTCCGCTTCAATCCCGG
CCTCTTGAGCATCCTCGTATCCCTCTACAAGTTGGAGGGCCGTAAAGTCC
AAATCCGGACCGAACTCGCCAAAGCCGCAACATACTGGCAGGCCCAAGCC
GCCGAACCACCAGCCTCCCTGCTCCGCGCCGCAGGAGCATCCCTCCTGCA
TTCCTCCGATCGCTCCGACCTAGCCAAAGCGGGCGACCTTTTCAAGTCTC
TCTACCAGAAAGACACGACCGACCAGTTCGCCGTAGCCGGCTACGTCGCC
TCCCAGGCAACGCTCGACTACTCCAAGGTAGAAGCACAGGTCGACACTCT
CCCCTCCGTCGCCGACCTGATCTCAGGCGTCAACATCGCCTCCCTCGAAA
ATGCCGGCATCTCCCCCTCCTCCGCGGCCAACGCCGCCGCCGCCGCAGCC
ATGGCCGGCGCGCGGAAGAGAAGCGCCAAGGATAAGGAAGATCGCGCAAC
CAAGCGTGTTCGCAAGGACCGTCTGCCCAAGGATTACGACCCCAGCAAGA
CCCCCGACCCAGAGCGTTGGCTGCCTCTTCGCGATCGGTCTTCGTACCGC
CCCAAGGGCCGCAAGGGTAAGCAGCGCGCTGCGGAGCGGACACAGGGTGG
TGTGGTGAACGAGAAGGCTGAAGAGTCCCCGGCTCCTCCCACTCAGAAGG
CTCAAGGAGGTGGTGGTGGCAGCTCGAAGAAGAATAAGAAGAAGGGCAAG
CGGTAGATGGCTGCCCAGTCGCTGAGCTCGTTGCTGCAACGAGCATCCAT
TGACGACCACGAGGAAGTCCTGCAGTCATGCAATGCCGCGTTGGCCAAGT
CGAAGTCGGACTTGCATGCTCAGCATATCAAGGCAGTTGCTCTGCTGAAG
CTTGACCGCTATGAGGACTGCCTGCGAGTATTCGAAGAAGCCGGTGATGG
TCTGAAGAAGAGAGCAGCTCTGGAATACGCCTACGCTCTATATAAATGCG
GTCAGCTGGACCCGGCGATTGAGGTGGTATCTCGCGTCGCTGGTGAGAGG
GGCGCACTACATTTGGAGGCTCAAGCCAGCTACCGTTCAGAGAAATTCCG
TCGCGCTGCCGAGATTTACGAAGAATTGTCCAAAGGCGATGCGTCCCTGT
CGAACGAAGAGAACGACTTGCGCACCAACTCATGGGCCACGGATGCACAG
CTGCAGTGGAAGGGCTACCCCCAGTTTGTACGCCATAACAGGCCGATGCG
GGATGATCTAGAGGCGTTCGAGACTGTCTATAACGCAGCTTGCTTGAGTA
TCGCCAAGGGCGAGTTCCAGCAGGGGCAAGTTCTATTGACTCGGGCTAAA
GAGCTCTGTCGGACGTCGGAGGACCTCACCCCTGAAGATCGGGCTGCAGA
GCTGCTCCCGATTGCCGTGCAGCAGTTGTACGTCTTGCTTCGCCAAGGGA
AGTCGGAGGAAGCACAGTCTGTTCTGGAGGAAATTTCCGTTAGCGATATC
CCTGAGCTCTCGACGAAGAAGATCGCGCAGACCAACATCACGCTTGCCCG
TGGCACGACCACTACCAATCCCTTCGCTCTATACAAGGCTCTTCACGAGA
TCCCCGATTCCACCGACAGCGACAAGCTCTTCGAATACCAGGATAACCTC
GCGACGGGGAACTCATATGCGGCAGACCTCCTCGTTCAGAAATACGATGG
CATTATCCGCTCCACCTCCAAGGCGCTCGCTCAAGCTGCCTACCCCTCGA
CGGAACCTCGTGCCAATCTGCTATCAGTCTACAACGCTGCCGCTCACGCA
CGCGGAGAAACAGGCACCAAGGCCTTGAAGCGGATACTATCTGCGCTCGA
CAAACGGCCCAAGGACCTTGGCCTCGCCCTCACAGCCGTCCAGCTCTACG
TGGGTGCGGGCAACACGACGTCCGCGATCACAACTCTAGAGCGGACCCTG
CAACTGCTTGACGAGTCCATCTCCGAGCAAGACAAAGCAGTCCGCTTCAA
TCCCGGCCTCTTGAGCATCCTCGTATCCCTCTACAAGTTGGAGGGCCGTA
AAGTCCAAATCCGGACCGAACTCGCCAAAGCCGCAACATACTGGCAGGCC
CAAGCCGCCGAACCACCAGCCTCCCTGCTCCGCGCCGCAGGAGCATCCCT
CCTGCATTCCTCCGATCGCTCCGACCTAGCCAAAGCGGGCGACCTTTTCA
AGTCTCTCTACCAGAAAGACACGACCGACCAGTTCGCCGTAGCCGGCTAC
GTCGCCTCCCAGGCAACGCTCGACTACTCCAAGGTAGAAGCACAGGTCGA
CACTCTCCCCTCCGTCGCCGACCTGATCTCAGGCGTCAACATCGCCTCCC
TCGAAAATGCCGGCATCTCCCCCTCCTCCGCGGCCAACGCCGCCGCCGCC
GCAGCCATGGCCGGCGCGCGGAAGAGAAGCGCCAAGGATAAGGAAGATCG
CGCAACCAAGCGTGTTCGCAAGGACCGTCTGCCCAAGGATTACGACCCCA
GCAAGACCCCCGACCCAGAGCGTTGGCTGCCTCTTCGCGATCGGTCTTCG
TACCGCCCCAAGGGCCGCAAGGGTAAGCAGCGCGCTGCGGAGCGGACACA
GGGTGGTGTGGTGAACGAGAAGGCTGAAGAGTCCCCGGCTCCTCCCACTC
AGAAGGCTCAAGGAGGTGGTGGTGGCAGCTCGAAGAAGAATAAGAAGAAG
GGCAAGCGGTAGATGGCTGCCCAGTCGCTGAGCTCGTTGCTGCAACGAGC
ATCCATTGACGACCACGAGGAAGTCCTGCAGTCATGCAATGCCGCGTTGG
CCAAGTCGAAGTCGGACTTGCATGCTCAGCATATCAAGGCAGTTGCTCTG
CTGAAGCTTGACCGCTATGAGGACTGCCTGCGAGTATTCGAAGAAGCCGG
TGATGGTCTGAAGAAGAGAGCAGCTCTGGAATACGCCTACGCTCTATATA
AATGCGGTCAGCTGGACCCGGCGATTGAGGTGGTATCTCGCGTCGCTGGT
GAGAGGGGCGCACTACATTTGGAGGCTCAAGCCAGCTACCGTTCAGAGAA
ATTCCGTCGCGCTGCCGAGATTTACGAAGAATTGTCCAAAGGCGATGCGT
CCCTGTCGAACGAAGAGAACGACTTGCGCACCAACTCATGGGCCACGGAT
GCACAGCTGCAGTGGAAGGGCTACCCCCAGTTTGTACGCCATAACAGGCC
GATGCGGGATGATCTAGAGGCGTTCGAGACTGTCTATAACGCAGCTTGCT
TGAGTATCGCCAAGGGCGAGTTCCAGCAGGGGCAAGTTCTATTGACTCGG
GCTAAAGAGCTCTGTCGGACGTCGGAGGACCTCACCCCTGAAGATCGGGC
TGCAGAGCTGCTCCCGATTGCCGTGCAGCAGTTGTACGTCTTGCTTCGCC
AAGGGAAGTCGGAGGAAGCACAGTCTGTTCTGGAGGAAATTTCCGTTAGC
GATATCCCTGAGCTCTCGACGAAGAAGATCGCGCAGACCAACATCACGCT
TGCCCGTGGCACGACCACTACCAATCCCTTCGCTCTATACAAGGCTCTTC
ACGAGATCCCCGATTCCACCGACAGCGACAAGCTCTTCGAATACCAGGAT
AACCTCGCGACGGGGAACTCATATGCGGCAGACCTCCTCGTTCAGAAATA
CGATGGCATTATCCGCTCCACCTCCAAGGCGCTCGCTCAAGCTGCCTACC
CCTCGACGGAACCTCGTGCCAATCTGCTATCAGTCTACAACGCTGCCGCT
CACGCACGCGGAGAAACAGGCACCAAGGCCTTGAAGCGGATACTATCTGC
GCTCGACAAACGGCCCAAGGACCTTGGCCTCGCCCTCACAGCCGTCCAGC
TCTACGTGGGTGCGGGCAACACGACGTCCGCGATCACAACTCTAGAGCGG
ACCCTGCAACTGCTTGACGAGTCCATCTCCGAGCAAGACAAAGCAGTCCG
CTTCAATCCCGGCCTCTTGAGCATCCTCGTATCCCTCTACAAGTTGGAGG
GCCGTAAAGTCCAAATCCGGACCGAACTCGCCAAAGCCGCAACATACTGG
CAGGCCCAAGCCGCCGAACCACCAGCCTCCCTGCTCCGCGCCGCAGGAGC
ATCCCTCCTGCATTCCTCCGATCGCTCCGACCTAGCCAAAGCGGGCGACC
TTTTCAAGTCTCTCTACCAGAAAGACACGACCGACCAGTTCGCCGTAGCC
GGCTACGTCGCCTCCCAGGCAACGCTCGACTACTCCAAGGTAGAAGCACA
GGTCGACACTCTCCCCTCCGTCGCCGACCTGATCTCAGGCGTCAACATCG
CCTCCCTCGAAAATGCCGGCATCTCCCCCTCCTCCGCGGCCAACGCCGCC
GCCGCCGCAGCCATGGCCGGCGCGCGGAAGAGAAGCGCCAAGGATAAGGA
AGATCGCGCAACCAAGCGTGTTCGCAAGGACCGTCTGCCCAAGGATTACG
ACCCCAGCAAGACCCCCGACCCAGAGCGTTGGCTGCCTCTTCGCGATCGG
TCTTCGTACCGCCCCAAGGGCCGCAAGGGTAAGCAGCGCGCTGCGGAGCG
GACACAGGGTGGTGTGGTGAACGAGAAGGCTGAAGAGTCCCCGGCTCCTC
CCACTCAGAAGGCTCAAGGAGGTGGTGGTGGCAGCTCGAAGAAGAATAAG
AAGAAGGGCAAGCGGTAGATGGCTGCCCAGTCGCTGAGCTCGTTGCTGCA
ACGAGCATCCATTGACGACCACGAGGAAGTCCTGCAGTCATGCAATGCCG
CGTTGGCCAAGTCGAAGTCGGACTTGCATGCTCAGCATATCAAGGCAGTT
GCTCTGCTGAAGCTTGACCGCTATGAGGACTGCCTGCGAGTATTCGAAGA
AGCCGGTGATGGTCTGAAGAAGAGAGCAGCTCTGGAATACGCCTACGCTC
TATATAAATGCGGTCAGCTGGACCCGGCGATTGAGGTGGTATCTCGCGTC
GCTGGTGAGAGGGGCGCACTACATTTGGAGGCTCAAGCCAGCTACCGTTC
AGAGAAATTCCGTCGCGCTGCCGAGATTTACGAAGAATTGTCCAAAGGCG
ATGCGTCCCTGTCGAACGAAGAGAACGACTTGCGCACCAACTCATGGGCC
ACGGATGCACAGCTGCAGTGGAAGGGCTACCCCCAGTTTGTACGCCATAA
CAGGCCGATGCGGGATGATCTAGAGGCGTTCGAGACTGTCTATAACGCAG
CTTGCTTGAGTATCGCCAAGGGCGAGTTCCAGCAGGGGCAAGTTCTATTG
ACTCGGGCTAAAGAGCTCTGTCGGACGTCGGAGGACCTCACCCCTGAAGA
TCGGGCTGCAGAGCTGCTCCCGATTGCCGTGCAGCAGTTGTACGTCTTGC
TTCGCCAAGGGAAGTCGGAGGAAGCACAGTCTGTTCTGGAGGAAATTTCC
GTTAGCGATATCCCTGAGCTCTCGACGAAGAAGATCGCGCAGACCAACAT
CACGCTTGCCCGTGGCACGACCACTACCAATCCCTTCGCTCTATACAAGG
CTCTTCACGAGATCCCCGATTCCACCGACAGCGACAAGCTCTTCGAATAC
CAGGATAACCTCGCGACGGGGAACTCATATGCGGCAGACCTCCTCGTTCA
GAAATACGATGGCATTATCCGCTCCACCTCCAAGGCGCTCGCTCAAGCTG
CCTACCCCTCGACGGAACCTCGTGCCAATCTGCTATCAGTCTACAACGCT
GCCGCTCACGCACGCGGAGAAACAGGCACCAAGGCCTTGAAGCGGATACT
ATCTGCGCTCGACAAACGGCCCAAGGACCTTGGCCTCGCCCTCACAGCCG
TCCAGCTCTACGTGGGTGCGGGCAACACGACGTCCGCGATCACAACTCTA
GAGCGGACCCTGCAACTGCTTGACGAGTCCATCTCCGAGCAAGACAAAGC
AGTCCGCTTCAATCCCGGCCTCTTGAGCATCCTCGTATCCCTCTACAAGT
TGGAGGGCCGTAAAGTCCAAATCCGGACCGAACTCGCCAAAGCCGCAACA
TACTGGCAGGCCCAAGCCGCCGAACCACCAGCCTCCCTGCTCCGCGCCGC
AGGAGCATCCCTCCTGCATTCCTCCGATCGCTCCGACCTAGCCAAAGCGG
GCGACCTTTTCAAGTCTCTCTACCAGAAAGACACGACCGACCAGTTCGCC
GTAGCCGGCTACGTCGCCTCCCAGGCAACGCTCGACTACTCCAAGGTAGA
AGCACAGGTCGACACTCTCCCCTCCGTCGCCGACCTGATCTCAGGCGTCA
ACATCGCCTCCCTCGAAAATGCCGGCATCTCCCCCTCCTCCGCGGCCAAC
GCCGCCGCCGCCGCAGCCATGGCCGGCGCGCGGAAGAGAAGCGCCAAGGA
TAAGGAAGATCGCGCAACCAAGCGTGTTCGCAAGGACCGTCTGCCCAAGG
ATTACGACCCCAGCAAGACCCCCGACCCAGAGCGTTGGCTGCCTCTTCGC
GATCGGTCTTCGTACCGCCCCAAGGGCCGCAAGGGTAAGCAGCGCGCTGC
GGAGCGGACACAGGGTGGTGTGGTGAACGAGAAGGCTGAAGAGTCCCCGG
CTCCTCCCACTCAGAAGGCTCAAGGAGGTGGTGGTGGCAGCTCGAAGAAG
AATAAGAAGAAGGGCAAGCGGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006614 | SRP-dependent cotranslational protein targeting to membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
| GO:0008312 | 7S RNA binding |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0048500 | signal recognition particle |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR026270 |
| InterPro | IPR013699 |
| InterPro | IPR031545 |
| PFAM | PF08492 |
| PFAM | PF17004 |
| InterPro | IPR011990 |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000066 | supercontig | MCQH01000066:797503..799664 + |
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