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ATCC10864_003407-T1, ATCC10864_003407-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003407-T1
Unique NameATCC10864_003407-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000066:1065548..1066443+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003407-T1 ID=ATCC10864_003407-T1|Name=ATCC10864_003407-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=896bp|location=Sequence derived from alignment at MCQH01000066:1065548..1066443+ (Aspergillus niger ATCC 10864)
ATGTCATGTTACTTGTCTCAGAGCTGCTTTAGGCAGCTTGCGCGGAGTCC
TTTGAGACAAGGACCTCTGCCCAACTTCCTCGTCCCCGCTTTCTCTCACC
CTCTTCGGACACAACCTTTCTCGACCACGTCCCCGGTACAATCGCGAGTT
GGCGGCGCCGCGATCACCGTGCCCCCGGAGGTGTCTCTGAAGTTCATCGA
CCTCCCTCAGCCTAAGACCAAGGCCAAGTCGGTTGACTTCCCTAACATGG
CCGTTGAGGTCAAAGGACCCCTGGGTAAGGAACAATGGCAACAATTCATA
GCAGCGGCGTCGGAAAGCGGAGCGAGACTGACATCTGAGTGCTAGGTGAA
TTGTCGCTGAACATCCCTTCCTACGTGAAAATCGACTACGATGAAGCCCT
TCGGAAAGCCACTCTGGCTGTTCAAGACTCAGAGATCACTCACCAGCGTG
CTATGTGGGGTGCGTAACTCCGTTGGAATTAAGTTTACTGTTGAATTATA
GTTGACGGGAGATTGTCTCTAGGAACCATGCGCGCCCACCTACAGAACCA
CATCCTCGGAGTGTCGGAAGGTCACATTTGCATTCTGAGTTTCGTTGGTG
TTGGTTACAGAGCTAGCATCGAACCCACGGCGACCACCGTTGAGCCCCAA
TACCCCGGTCAACAGTTCGTGTCCCTGAAGGTTGGATACTCGCACCCGAT
TGAGCTGGGTATTCCCCAGGGCGTCAAGGCCAGCACACCCCAGCCGACTC
GTATCCTGTTGGAGAGCGTGGACAAGCAGCTTGTGACCAAGTTCGCGGCG
GAGATCCGCGAATGGCGCAAGCCGGAACCTTACAAGGGCAAGGGTATCTT
CGTCAACGGGGAGACGATCAAGCTCAAGGACAAGAAGATTCGGTGA
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Coding sequence (CDS) from alignment at MCQH01000066:1065548..1066443+

>ATCC10864_003407-T1 ID=ATCC10864_003407-T1|Name=ATCC10864_003407-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2286bp|location=Sequence derived from alignment at MCQH01000066:1065548..1066443+ (Aspergillus niger ATCC 10864)
ATGTCATGTTACTTGTCTCAGAGCTGCTTTAGGCAGCTTGCGCGGAGTCC
TTTGAGACAAGGACCTCTGCCCAACTTCCTCGTCCCCGCTTTCTCTCACC
CTCTTCGGACACAACCTTTCTCGACCACGTCCCCGGTACAATCGCGAGTT
GGCGGCGCCGCGATCACCGTGCCCCCGGAGGTGTCTCTGAAGTTCATCGA
CCTCCCTCAGCCTAAGACCAAGGCCAAGTCGGTTGACTTCCCTAACATGG
CCGTTGAGGTCAAAGGACCCCTGGGTGAATTGTCGCTGAACATCCCTTCC
TACGTGAAAATCGACTACGATGAAGCCCTTCGGAAAGCCACTCTGGCTGT
TCAAGACTCAGAGATCACTCACCAGCGTGCTATGTGGGGAACCATGCGCG
CCCACCTACAGAACCACATCCTCGGAGTGTCGGAAGGTCACATTTGCATT
CTGAGTTTCGTTGGTGTTGGTTACAGAGCTAGCATCGAACCCACGGCGAC
CACCGTTGAGCCCCAATACCCCGGTCAACAGTTCGTGTCCCTGAAGGTTG
GATACTCGCACCCGATTGAGCTGGGTATTCCCCAGGGCGTCAAGGCCAGC
ACACCCCAGCCGACTCGTATCCTGTTGGAGAGCGTGGACAAGCAGCTTGT
GACCAAGTTCGCGGCGGAGATCCGCGAATGGCGCAAGCCGGAACCTTACA
AGGGCAAGGGTATCTTCGTCAACGGGGAGACGATCAAGCTCAAGGACAAG
AAGATTCGGTGAATGTCATGTTACTTGTCTCAGAGCTGCTTTAGGCAGCT
TGCGCGGAGTCCTTTGAGACAAGGACCTCTGCCCAACTTCCTCGTCCCCG
CTTTCTCTCACCCTCTTCGGACACAACCTTTCTCGACCACGTCCCCGGTA
CAATCGCGAGTTGGCGGCGCCGCGATCACCGTGCCCCCGGAGGTGTCTCT
GAAGTTCATCGACCTCCCTCAGCCTAAGACCAAGGCCAAGTCGGTTGACT
TCCCTAACATGGCCGTTGAGGTCAAAGGACCCCTGGGTGAATTGTCGCTG
AACATCCCTTCCTACGTGAAAATCGACTACGATGAAGCCCTTCGGAAAGC
CACTCTGGCTGTTCAAGACTCAGAGATCACTCACCAGCGTGCTATGTGGG
GAACCATGCGCGCCCACCTACAGAACCACATCCTCGGAGTGTCGGAAGGT
CACATTTGCATTCTGAGTTTCGTTGGTGTTGGTTACAGAGCTAGCATCGA
ACCCACGGCGACCACCGTTGAGCCCCAATACCCCGGTCAACAGTTCGTGT
CCCTGAAGGTTGGATACTCGCACCCGATTGAGCTGGGTATTCCCCAGGGC
GTCAAGGCCAGCACACCCCAGCCGACTCGTATCCTGTTGGAGAGCGTGGA
CAAGCAGCTTGTGACCAAGTTCGCGGCGGAGATCCGCGAATGGCGCAAGC
CGGAACCTTACAAGGGCAAGGGTATCTTCGTCAACGGGGAGACGATCAAG
CTCAAGGACAAGAAGATTCGGTGAATGTCATGTTACTTGTCTCAGAGCTG
CTTTAGGCAGCTTGCGCGGAGTCCTTTGAGACAAGGACCTCTGCCCAACT
TCCTCGTCCCCGCTTTCTCTCACCCTCTTCGGACACAACCTTTCTCGACC
ACGTCCCCGGTACAATCGCGAGTTGGCGGCGCCGCGATCACCGTGCCCCC
GGAGGTGTCTCTGAAGTTCATCGACCTCCCTCAGCCTAAGACCAAGGCCA
AGTCGGTTGACTTCCCTAACATGGCCGTTGAGGTCAAAGGACCCCTGGGT
GAATTGTCGCTGAACATCCCTTCCTACGTGAAAATCGACTACGATGAAGC
CCTTCGGAAAGCCACTCTGGCTGTTCAAGACTCAGAGATCACTCACCAGC
GTGCTATGTGGGGAACCATGCGCGCCCACCTACAGAACCACATCCTCGGA
GTGTCGGAAGGTCACATTTGCATTCTGAGTTTCGTTGGTGTTGGTTACAG
AGCTAGCATCGAACCCACGGCGACCACCGTTGAGCCCCAATACCCCGGTC
AACAGTTCGTGTCCCTGAAGGTTGGATACTCGCACCCGATTGAGCTGGGT
ATTCCCCAGGGCGTCAAGGCCAGCACACCCCAGCCGACTCGTATCCTGTT
GGAGAGCGTGGACAAGCAGCTTGTGACCAAGTTCGCGGCGGAGATCCGCG
AATGGCGCAAGCCGGAACCTTACAAGGGCAAGGGTATCTTCGTCAACGGG
GAGACGATCAAGCTCAAGGACAAGAAGATTCGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0019843rRNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003407ATCC10864_003407Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003407-T1.exon1ATCC10864_003407-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_003407-T1.exon2ATCC10864_003407-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003407-T1.exon3ATCC10864_003407-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003407-T1.cdsATCC10864_003407-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003407-T1ATCC10864_003407-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR019906
InterProIPR000702
InterProIPR020040
InterProIPR002358
PFAMPF00347
InterProIPR036789
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000066supercontigMCQH01000066:1065548..1066443 +
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