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ATCC10864_003673-T1, ATCC10864_003673-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003673-T1
Unique NameATCC10864_003673-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000068:281809..283218+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003673-T1 ID=ATCC10864_003673-T1|Name=ATCC10864_003673-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1410bp|location=Sequence derived from alignment at MCQH01000068:281809..283218+ (Aspergillus niger ATCC 10864)
ATGAACGGCGCCAGCGATCCGGAGAGAGAGCAGGCGCTCGAGGATTACAA
GAGGAGCCTGCTCGAGCTCCGAGAATGGGAAGCCAAGCTCAAGTCTCTTC
GCATGGGGATCAAGGATTTGCAACGAGAGTTCGATATCTCGGAAGAGAAC
ATCAAGGCGCTGCAAAGCGTCGGCCAGATCATCGGAGAAGTGTTGAAGCA
GCTGGATGAGGAGAGATGTATGTTCATCCCTATTTCTCACCAATATAACC
TCGACTCCGGGCAGATCCTTGTCCATCGTCTGTCGTTCTCTTTGCCGGTA
TGTGGCTGACCTGATCCAGTCATTGTCAAGGCATCATCCGGACCGCGTTA
TGTCGTCGGTTGCCGCTCGAAGGTCGATAAGGCAAAGCTAAAGCAGGGCA
CCCGTGTCGCCCTCGATATGACCACACTTACTATAATGAGAATGCTCCCG
AGAGAGGTTGATCCGTTGGTATACAACATGTCACTGGAGGACCCAGGCCA
GATCAACTTTGCAGGCATTGGTGGTCTGAACGAACAGATCCGCGAGCTCC
GAGAAGTTATCGAGTTGCCGCTCAAGAACCCCGAGCTTTTCCAAAGAGTA
GGAATCAAGCCGCCCAAGGGTGTGCTCCTCTACGGTCCTCCGGGTACCGG
AAAGACGTTGTTGGCACGAGCAGTGGCAAGCTCAATGGAGACCAACTTCC
TGAAAGGTATACATAATCAACTCCGGGCGCGGGCTTAGGTAGGCCTAGAT
CGCTAACTTCATCCTAGTTGTCTCGTCCGCTATTGTCGACAAATACATCG
GTGAATCTGCACGGTTAATAAGAGAGATGTTCGGATACGCCAAAGAACAC
GAGCCTTGCATCATCTTCATGGACGAAATCGACGCTATCGGTGGAAGACG
TTTCTCAGAGGGTACTTCGGCTGATCGGGAAATCCAGCGTACATTGATGG
AGCTTCTCAACCAGCTGGATGGTTTTGATTACCTTGGAAAGACGAAGATC
ATCATGGCCACGAATCGGCCTGATACGCTTGACCCGGCTCTGCTGCGAGC
AGGTCGTCTCGACCGCAAGATCGAGATTCCCCTGCCCAACGAAGTCGGTC
GCTTGGAGATCTTGAAGATCCACTCCAGCACCGTTCAACTGGATGGCGAG
ATTGACTTCGAGAGTGTGGTGAAGATGAGTGACGGACTCAACGGTGCTGA
TCTTCGCAACGTCGTTACGGAAGCGTATGTCTATTTCCCGTTGTTGCTCT
GCCATTTTAATTACATGACTAGGACTAATTCGGAGACAGTGGTCTATTTG
CTATCAAGGATTACCGGGACGCGATCAACCAGGATGACTTCAACAGAGCG
GTCCGCAAGGTGGCTGAGGCGAAGAAGCTGGAGGGCAAGCTGGAATACCA
GAAATTGTAG
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Coding sequence (CDS) from alignment at MCQH01000068:281809..283218+

>ATCC10864_003673-T1 ID=ATCC10864_003673-T1|Name=ATCC10864_003673-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4728bp|location=Sequence derived from alignment at MCQH01000068:281809..283218+ (Aspergillus niger ATCC 10864)
ATGAACGGCGCCAGCGATCCGGAGAGAGAGCAGGCGCTCGAGGATTACAA
GAGGAGCCTGCTCGAGCTCCGAGAATGGGAAGCCAAGCTCAAGTCTCTTC
GCATGGGGATCAAGGATTTGCAACGAGAGTTCGATATCTCGGAAGAGAAC
ATCAAGGCGCTGCAAAGCGTCGGCCAGATCATCGGAGAAGTGTTGAAGCA
GCTGGATGAGGAGAGATTCATTGTCAAGGCATCATCCGGACCGCGTTATG
TCGTCGGTTGCCGCTCGAAGGTCGATAAGGCAAAGCTAAAGCAGGGCACC
CGTGTCGCCCTCGATATGACCACACTTACTATAATGAGAATGCTCCCGAG
AGAGGTTGATCCGTTGGTATACAACATGTCACTGGAGGACCCAGGCCAGA
TCAACTTTGCAGGCATTGGTGGTCTGAACGAACAGATCCGCGAGCTCCGA
GAAGTTATCGAGTTGCCGCTCAAGAACCCCGAGCTTTTCCAAAGAGTAGG
AATCAAGCCGCCCAAGGGTGTGCTCCTCTACGGTCCTCCGGGTACCGGAA
AGACGTTGTTGGCACGAGCAGTGGCAAGCTCAATGGAGACCAACTTCCTG
AAAGTTGTCTCGTCCGCTATTGTCGACAAATACATCGGTGAATCTGCACG
GTTAATAAGAGAGATGTTCGGATACGCCAAAGAACACGAGCCTTGCATCA
TCTTCATGGACGAAATCGACGCTATCGGTGGAAGACGTTTCTCAGAGGGT
ACTTCGGCTGATCGGGAAATCCAGCGTACATTGATGGAGCTTCTCAACCA
GCTGGATGGTTTTGATTACCTTGGAAAGACGAAGATCATCATGGCCACGA
ATCGGCCTGATACGCTTGACCCGGCTCTGCTGCGAGCAGGTCGTCTCGAC
CGCAAGATCGAGATTCCCCTGCCCAACGAAGTCGGTCGCTTGGAGATCTT
GAAGATCCACTCCAGCACCGTTCAACTGGATGGCGAGATTGACTTCGAGA
GTGTGGTGAAGATGAGTGACGGACTCAACGGTGCTGATCTTCGCAACGTC
GTTACGGAAGCTGGTCTATTTGCTATCAAGGATTACCGGGACGCGATCAA
CCAGGATGACTTCAACAGAGCGGTCCGCAAGGTGGCTGAGGCGAAGAAGC
TGGAGGGCAAGCTGGAATACCAGAAATTGTAGATGAACGGCGCCAGCGAT
CCGGAGAGAGAGCAGGCGCTCGAGGATTACAAGAGGAGCCTGCTCGAGCT
CCGAGAATGGGAAGCCAAGCTCAAGTCTCTTCGCATGGGGATCAAGGATT
TGCAACGAGAGTTCGATATCTCGGAAGAGAACATCAAGGCGCTGCAAAGC
GTCGGCCAGATCATCGGAGAAGTGTTGAAGCAGCTGGATGAGGAGAGATT
CATTGTCAAGGCATCATCCGGACCGCGTTATGTCGTCGGTTGCCGCTCGA
AGGTCGATAAGGCAAAGCTAAAGCAGGGCACCCGTGTCGCCCTCGATATG
ACCACACTTACTATAATGAGAATGCTCCCGAGAGAGGTTGATCCGTTGGT
ATACAACATGTCACTGGAGGACCCAGGCCAGATCAACTTTGCAGGCATTG
GTGGTCTGAACGAACAGATCCGCGAGCTCCGAGAAGTTATCGAGTTGCCG
CTCAAGAACCCCGAGCTTTTCCAAAGAGTAGGAATCAAGCCGCCCAAGGG
TGTGCTCCTCTACGGTCCTCCGGGTACCGGAAAGACGTTGTTGGCACGAG
CAGTGGCAAGCTCAATGGAGACCAACTTCCTGAAAGTTGTCTCGTCCGCT
ATTGTCGACAAATACATCGGTGAATCTGCACGGTTAATAAGAGAGATGTT
CGGATACGCCAAAGAACACGAGCCTTGCATCATCTTCATGGACGAAATCG
ACGCTATCGGTGGAAGACGTTTCTCAGAGGGTACTTCGGCTGATCGGGAA
ATCCAGCGTACATTGATGGAGCTTCTCAACCAGCTGGATGGTTTTGATTA
CCTTGGAAAGACGAAGATCATCATGGCCACGAATCGGCCTGATACGCTTG
ACCCGGCTCTGCTGCGAGCAGGTCGTCTCGACCGCAAGATCGAGATTCCC
CTGCCCAACGAAGTCGGTCGCTTGGAGATCTTGAAGATCCACTCCAGCAC
CGTTCAACTGGATGGCGAGATTGACTTCGAGAGTGTGGTGAAGATGAGTG
ACGGACTCAACGGTGCTGATCTTCGCAACGTCGTTACGGAAGCTGGTCTA
TTTGCTATCAAGGATTACCGGGACGCGATCAACCAGGATGACTTCAACAG
AGCGGTCCGCAAGGTGGCTGAGGCGAAGAAGCTGGAGGGCAAGCTGGAAT
ACCAGAAATTGTAGATGAACGGCGCCAGCGATCCGGAGAGAGAGCAGGCG
CTCGAGGATTACAAGAGGAGCCTGCTCGAGCTCCGAGAATGGGAAGCCAA
GCTCAAGTCTCTTCGCATGGGGATCAAGGATTTGCAACGAGAGTTCGATA
TCTCGGAAGAGAACATCAAGGCGCTGCAAAGCGTCGGCCAGATCATCGGA
GAAGTGTTGAAGCAGCTGGATGAGGAGAGATTCATTGTCAAGGCATCATC
CGGACCGCGTTATGTCGTCGGTTGCCGCTCGAAGGTCGATAAGGCAAAGC
TAAAGCAGGGCACCCGTGTCGCCCTCGATATGACCACACTTACTATAATG
AGAATGCTCCCGAGAGAGGTTGATCCGTTGGTATACAACATGTCACTGGA
GGACCCAGGCCAGATCAACTTTGCAGGCATTGGTGGTCTGAACGAACAGA
TCCGCGAGCTCCGAGAAGTTATCGAGTTGCCGCTCAAGAACCCCGAGCTT
TTCCAAAGAGTAGGAATCAAGCCGCCCAAGGGTGTGCTCCTCTACGGTCC
TCCGGGTACCGGAAAGACGTTGTTGGCACGAGCAGTGGCAAGCTCAATGG
AGACCAACTTCCTGAAAGTTGTCTCGTCCGCTATTGTCGACAAATACATC
GGTGAATCTGCACGGTTAATAAGAGAGATGTTCGGATACGCCAAAGAACA
CGAGCCTTGCATCATCTTCATGGACGAAATCGACGCTATCGGTGGAAGAC
GTTTCTCAGAGGGTACTTCGGCTGATCGGGAAATCCAGCGTACATTGATG
GAGCTTCTCAACCAGCTGGATGGTTTTGATTACCTTGGAAAGACGAAGAT
CATCATGGCCACGAATCGGCCTGATACGCTTGACCCGGCTCTGCTGCGAG
CAGGTCGTCTCGACCGCAAGATCGAGATTCCCCTGCCCAACGAAGTCGGT
CGCTTGGAGATCTTGAAGATCCACTCCAGCACCGTTCAACTGGATGGCGA
GATTGACTTCGAGAGTGTGGTGAAGATGAGTGACGGACTCAACGGTGCTG
ATCTTCGCAACGTCGTTACGGAAGCTGGTCTATTTGCTATCAAGGATTAC
CGGGACGCGATCAACCAGGATGACTTCAACAGAGCGGTCCGCAAGGTGGC
TGAGGCGAAGAAGCTGGAGGGCAAGCTGGAATACCAGAAATTGTAGATGA
ACGGCGCCAGCGATCCGGAGAGAGAGCAGGCGCTCGAGGATTACAAGAGG
AGCCTGCTCGAGCTCCGAGAATGGGAAGCCAAGCTCAAGTCTCTTCGCAT
GGGGATCAAGGATTTGCAACGAGAGTTCGATATCTCGGAAGAGAACATCA
AGGCGCTGCAAAGCGTCGGCCAGATCATCGGAGAAGTGTTGAAGCAGCTG
GATGAGGAGAGATTCATTGTCAAGGCATCATCCGGACCGCGTTATGTCGT
CGGTTGCCGCTCGAAGGTCGATAAGGCAAAGCTAAAGCAGGGCACCCGTG
TCGCCCTCGATATGACCACACTTACTATAATGAGAATGCTCCCGAGAGAG
GTTGATCCGTTGGTATACAACATGTCACTGGAGGACCCAGGCCAGATCAA
CTTTGCAGGCATTGGTGGTCTGAACGAACAGATCCGCGAGCTCCGAGAAG
TTATCGAGTTGCCGCTCAAGAACCCCGAGCTTTTCCAAAGAGTAGGAATC
AAGCCGCCCAAGGGTGTGCTCCTCTACGGTCCTCCGGGTACCGGAAAGAC
GTTGTTGGCACGAGCAGTGGCAAGCTCAATGGAGACCAACTTCCTGAAAG
TTGTCTCGTCCGCTATTGTCGACAAATACATCGGTGAATCTGCACGGTTA
ATAAGAGAGATGTTCGGATACGCCAAAGAACACGAGCCTTGCATCATCTT
CATGGACGAAATCGACGCTATCGGTGGAAGACGTTTCTCAGAGGGTACTT
CGGCTGATCGGGAAATCCAGCGTACATTGATGGAGCTTCTCAACCAGCTG
GATGGTTTTGATTACCTTGGAAAGACGAAGATCATCATGGCCACGAATCG
GCCTGATACGCTTGACCCGGCTCTGCTGCGAGCAGGTCGTCTCGACCGCA
AGATCGAGATTCCCCTGCCCAACGAAGTCGGTCGCTTGGAGATCTTGAAG
ATCCACTCCAGCACCGTTCAACTGGATGGCGAGATTGACTTCGAGAGTGT
GGTGAAGATGAGTGACGGACTCAACGGTGCTGATCTTCGCAACGTCGTTA
CGGAAGCTGGTCTATTTGCTATCAAGGATTACCGGGACGCGATCAACCAG
GATGACTTCAACAGAGCGGTCCGCAAGGTGGCTGAGGCGAAGAAGCTGGA
GGGCAAGCTGGAATACCAGAAATTGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0036402proteasome-activating ATPase activity
GO:0016887ATPase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0030163protein catabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPT4ATCC10864_003673Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003673-T1.exon1ATCC10864_003673-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_003673-T1.exon2ATCC10864_003673-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003673-T1.exon3ATCC10864_003673-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_003673-T1.exon4ATCC10864_003673-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003673-T1.cdsATCC10864_003673-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003673-T1ATCC10864_003673-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR032501
InterProIPR041569
PFAMPF07724
PFAMPF00004
InterProIPR027417
InterProIPR005937
PFAMPF17862
PFAMPF16450
InterProIPR003959
InterProIPR003960
InterProIPR003593
PFAMPF07728
Properties
Property NameValue
Product26S proteasome subunit rpt4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000068supercontigMCQH01000068:281809..283218 +
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