You are here

Home

ATCC10864_003697-T1, ATCC10864_003697-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003697-T1
Unique NameATCC10864_003697-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000068:365822..366948+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003697-T1 ID=ATCC10864_003697-T1|Name=ATCC10864_003697-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1127bp|location=Sequence derived from alignment at MCQH01000068:365822..366948+ (Aspergillus niger ATCC 10864)
ATGATGATCTACTCTCTGCTTCTCTCTGCATTGCCTCTGCTCAGCAGCGC
CGCCCTGACCTACCGCGGGGCGGATATCTCCTCCCTTTTGATCGAGGAAG
ATGCCGGCATCAGCTATAAGAATTTGAATGGCGAGACCCAGGCATTGGAG
GATATTCTGGTCAACAATGGCGTCAACTCGATCCGACAGAGGGTGTGGGT
AGACCCCAGCGATGGCTCGTACGATCTCGACTATAATCTCAAGCTGGCCA
AGCGTGTTCAGGCCGCGGGTATGAGCATTTACTTGGATCTGCATCTCAGT
GATACGTGGGCAGATCCCAGTGATCAGGTCCGTCCTACTGCTGGAAGGGA
AGACACCGCAAGAGAGAGATGGAACACTAACGTAAGAGATGTATACAGAC
TACCCCTACCGGTTGGTCGACCACGGACATCGACACACTCACCTGGCAAC
TGTATAACTACACGCTCGACGTCTGCAACACTTTCGCAGAGAATGACATT
GACATAGAGATTGTCTCCATTGGTAATGAGATCAGCAGCGGACTTCTCTG
GCCATTGGGCAAAACCAGCAACTATGACAATATCGCGAAGCTGCTGCACT
CCGGCGCCTGGGGAGTGAAGGACTCCAACCAGGCCACAACCCCGAAGATT
ATGATCCACCTGGACAATGGATGGGACTGGGAGGAACAAGAATACTTCTA
CAAGACTGTCCTGGCCACGGGGTCGCTGCTCTCCACGGATTTCGACCTCA
TGGGAGTCTCGTACTATCCATTCTACAGCTCGGAAGCTACCCTGTCGGCG
CTCCAGACCAGCCTCACGAACATGCAATCGAACTACGATAAGTCCGTGGT
GGTGGTGGAGACGAACTGGCCCGTGTCTTGCCCGGACCCGGAGTATTCAT
TCCCGTCGGATCTCAGCTCGATCCCCTTCTCGGCCGCAGGACAGGAGGAG
TTCCTCGAGAAGCTCGCAGAGGTGGTAGAGGGCGTCACGGACGGACTGGG
TATTTATTACTGGGAACCGGCGTGGGTCGACAATGCCGCGCTAGGATCCA
GCTGTGCGGACAACCTGATGGTGGATATTGACACAGATGAAGTCCTGGAG
AGTGTCACCGTGTTTGAGGACCTCTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000068:365822..366948+

>ATCC10864_003697-T1 ID=ATCC10864_003697-T1|Name=ATCC10864_003697-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2112bp|location=Sequence derived from alignment at MCQH01000068:365822..366948+ (Aspergillus niger ATCC 10864)
ATGATGATCTACTCTCTGCTTCTCTCTGCATTGCCTCTGCTCAGCAGCGC
CGCCCTGACCTACCGCGGGGCGGATATCTCCTCCCTTTTGATCGAGGAAG
ATGCCGGCATCAGCTATAAGAATTTGAATGGCGAGACCCAGGCATTGGAG
GATATTCTGGTCAACAATGGCGTCAACTCGATCCGACAGAGGGTGTGGGT
AGACCCCAGCGATGGCTCGTACGATCTCGACTATAATCTCAAGCTGGCCA
AGCGTGTTCAGGCCGCGGGTATGAGCATTTACTTGGATCTGCATCTCAGT
GATACGTGGGCAGATCCCAGTGATCAGACTACCCCTACCGGTTGGTCGAC
CACGGACATCGACACACTCACCTGGCAACTGTATAACTACACGCTCGACG
TCTGCAACACTTTCGCAGAGAATGACATTGACATAGAGATTGTCTCCATT
GGTAATGAGATCAGCAGCGGACTTCTCTGGCCATTGGGCAAAACCAGCAA
CTATGACAATATCGCGAAGCTGCTGCACTCCGGCGCCTGGGGAGTGAAGG
ACTCCAACCAGGCCACAACCCCGAAGATTATGATCCACCTGGACAATGGA
TGGGACTGGGAGGAACAAGAATACTTCTACAAGACTGTCCTGGCCACGGG
GTCGCTGCTCTCCACGGATTTCGACCTCATGGGAGTCTCGTACTATCCAT
TCTACAGCTCGGAAGCTACCCTGTCGGCGCTCCAGACCAGCCTCACGAAC
ATGCAATCGAACTACGATAAGTCCGTGGTGGTGGTGGAGACGAACTGGCC
CGTGTCTTGCCCGGACCCGGAGTATTCATTCCCGTCGGATCTCAGCTCGA
TCCCCTTCTCGGCCGCAGGACAGGAGGAGTTCCTCGAGAAGCTCGCAGAG
GTGGTAGAGGGCGTCACGGACGGACTGGGTATTTATTACTGGGAACCGGC
GTGGGTCGACAATGCCGCGCTAGGATCCAGCTGTGCGGACAACCTGATGG
TGGATATTGACACAGATGAAGTCCTGGAGAGTGTCACCGTGTTTGAGGAC
CTCTGAATGATGATCTACTCTCTGCTTCTCTCTGCATTGCCTCTGCTCAG
CAGCGCCGCCCTGACCTACCGCGGGGCGGATATCTCCTCCCTTTTGATCG
AGGAAGATGCCGGCATCAGCTATAAGAATTTGAATGGCGAGACCCAGGCA
TTGGAGGATATTCTGGTCAACAATGGCGTCAACTCGATCCGACAGAGGGT
GTGGGTAGACCCCAGCGATGGCTCGTACGATCTCGACTATAATCTCAAGC
TGGCCAAGCGTGTTCAGGCCGCGGGTATGAGCATTTACTTGGATCTGCAT
CTCAGTGATACGTGGGCAGATCCCAGTGATCAGACTACCCCTACCGGTTG
GTCGACCACGGACATCGACACACTCACCTGGCAACTGTATAACTACACGC
TCGACGTCTGCAACACTTTCGCAGAGAATGACATTGACATAGAGATTGTC
TCCATTGGTAATGAGATCAGCAGCGGACTTCTCTGGCCATTGGGCAAAAC
CAGCAACTATGACAATATCGCGAAGCTGCTGCACTCCGGCGCCTGGGGAG
TGAAGGACTCCAACCAGGCCACAACCCCGAAGATTATGATCCACCTGGAC
AATGGATGGGACTGGGAGGAACAAGAATACTTCTACAAGACTGTCCTGGC
CACGGGGTCGCTGCTCTCCACGGATTTCGACCTCATGGGAGTCTCGTACT
ATCCATTCTACAGCTCGGAAGCTACCCTGTCGGCGCTCCAGACCAGCCTC
ACGAACATGCAATCGAACTACGATAAGTCCGTGGTGGTGGTGGAGACGAA
CTGGCCCGTGTCTTGCCCGGACCCGGAGTATTCATTCCCGTCGGATCTCA
GCTCGATCCCCTTCTCGGCCGCAGGACAGGAGGAGTTCCTCGAGAAGCTC
GCAGAGGTGGTAGAGGGCGTCACGGACGGACTGGGTATTTATTACTGGGA
ACCGGCGTGGGTCGACAATGCCGCGCTAGGATCCAGCTGTGCGGACAACC
TGATGGTGGATATTGACACAGATGAAGTCCTGGAGAGTGTCACCGTGTTT
GAGGACCTCTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0015926glucosidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003697ATCC10864_003697Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003697-T1.exon1ATCC10864_003697-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_003697-T1.exon2ATCC10864_003697-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003697-T1.cdsATCC10864_003697-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003697-T1ATCC10864_003697-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF07745
InterProIPR017853
InterProIPR011683
Properties
Property NameValue
NoteSECRETED:SignalP(1-17)
NoteCAZy:GH53
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000068supercontigMCQH01000068:365822..366948 +
Powered by Drupal