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ATCC10864_003745-T1, ATCC10864_003745-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003745-T1
Unique NameATCC10864_003745-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000068:494424..495280+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003745-T1 ID=ATCC10864_003745-T1|Name=ATCC10864_003745-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=857bp|location=Sequence derived from alignment at MCQH01000068:494424..495280+ (Aspergillus niger ATCC 10864)
ATGTGGTCTTGGTTCGGCGGATCCGCCGCTCAGAAGCGGAAAGATGCGCC
CAAGAATGCGATCCTCATGCTTCGCGAGCAGCTGGATATGCTCCAAAAGC
GCGAGAAGCATTTGGAGAATCTGATGGAGGAGCAGGATGCAATTGCTCGG
AAGAACGTAACGTCAAACAAGGCCGGTAGGTGACAGCAGAAAAACAGCAA
CTAGGCAACAACAAATGAAGTCTAACGGGTTATTGATCTGTATAGCGGCT
AAGAACGCCCTTCGACGGAAGAAGGTTCATGAGAAGAACCTCGAACAGAC
GACGGCGCAGATCGTTCAGCTAGAACAGCAGATCTACTCGATTGAGGCGG
CGAATATCAACCAGGAGACTTTGAAGGCTATGGAGGCGGCTGGTGCGGCG
ATGGCGAAGATCCATGGCTCCATGACGCTTGATACGGTGGATCAGACAAT
GTATGTCGTTTCGTTACGGTATCATTTGAGTGATGGGAACACGGCAACTG
ACTATGGTCTAGGGATACACTTCGCGAACAGCACCAACTCAGCACCGAAA
TCGCACAAGCCATTACAAGCACCAATCTGGTCGACCAACCAGACGAGGCC
GATTTGGAAGAGGAACTCGAGGGCTTGGAGCAGGAGGCCATGGACGAGCG
GATGCTCAACACAGGTACGGTGCCGGTTGCAGACCAACTCAACCGTTTAC
CTCCTGCGGCAAATGGAGAAAGTAAGCCACTGTCCCTCCCTCTTTACTAT
GAAACTCTTCTAACGTACATGCAACAGTCAAATCCAAACCTCAGACCGAA
GAGGAAGACGAGGAAGCAGAACTGGAGAAGCTACGTGCGGAAATGGCCAT
GGGATAA
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Coding sequence (CDS) from alignment at MCQH01000068:494424..495280+

>ATCC10864_003745-T1 ID=ATCC10864_003745-T1|Name=ATCC10864_003745-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2676bp|location=Sequence derived from alignment at MCQH01000068:494424..495280+ (Aspergillus niger ATCC 10864)
ATGTGGTCTTGGTTCGGCGGATCCGCCGCTCAGAAGCGGAAAGATGCGCC
CAAGAATGCGATCCTCATGCTTCGCGAGCAGCTGGATATGCTCCAAAAGC
GCGAGAAGCATTTGGAGAATCTGATGGAGGAGCAGGATGCAATTGCTCGG
AAGAACGTAACGTCAAACAAGGCCGCGGCTAAGAACGCCCTTCGACGGAA
GAAGGTTCATGAGAAGAACCTCGAACAGACGACGGCGCAGATCGTTCAGC
TAGAACAGCAGATCTACTCGATTGAGGCGGCGAATATCAACCAGGAGACT
TTGAAGGCTATGGAGGCGGCTGGTGCGGCGATGGCGAAGATCCATGGCTC
CATGACGCTTGATACGGTGGATCAGACAATGGATACACTTCGCGAACAGC
ACCAACTCAGCACCGAAATCGCACAAGCCATTACAAGCACCAATCTGGTC
GACCAACCAGACGAGGCCGATTTGGAAGAGGAACTCGAGGGCTTGGAGCA
GGAGGCCATGGACGAGCGGATGCTCAACACAGGTACGGTGCCGGTTGCAG
ACCAACTCAACCGTTTACCTCCTGCGGCAAATGGAGAAATCAAATCCAAA
CCTCAGACCGAAGAGGAAGACGAGGAAGCAGAACTGGAGAAGCTACGTGC
GGAAATGGCCATGGGATAAATGTGGTCTTGGTTCGGCGGATCCGCCGCTC
AGAAGCGGAAAGATGCGCCCAAGAATGCGATCCTCATGCTTCGCGAGCAG
CTGGATATGCTCCAAAAGCGCGAGAAGCATTTGGAGAATCTGATGGAGGA
GCAGGATGCAATTGCTCGGAAGAACGTAACGTCAAACAAGGCCGCGGCTA
AGAACGCCCTTCGACGGAAGAAGGTTCATGAGAAGAACCTCGAACAGACG
ACGGCGCAGATCGTTCAGCTAGAACAGCAGATCTACTCGATTGAGGCGGC
GAATATCAACCAGGAGACTTTGAAGGCTATGGAGGCGGCTGGTGCGGCGA
TGGCGAAGATCCATGGCTCCATGACGCTTGATACGGTGGATCAGACAATG
GATACACTTCGCGAACAGCACCAACTCAGCACCGAAATCGCACAAGCCAT
TACAAGCACCAATCTGGTCGACCAACCAGACGAGGCCGATTTGGAAGAGG
AACTCGAGGGCTTGGAGCAGGAGGCCATGGACGAGCGGATGCTCAACACA
GGTACGGTGCCGGTTGCAGACCAACTCAACCGTTTACCTCCTGCGGCAAA
TGGAGAAATCAAATCCAAACCTCAGACCGAAGAGGAAGACGAGGAAGCAG
AACTGGAGAAGCTACGTGCGGAAATGGCCATGGGATAAATGTGGTCTTGG
TTCGGCGGATCCGCCGCTCAGAAGCGGAAAGATGCGCCCAAGAATGCGAT
CCTCATGCTTCGCGAGCAGCTGGATATGCTCCAAAAGCGCGAGAAGCATT
TGGAGAATCTGATGGAGGAGCAGGATGCAATTGCTCGGAAGAACGTAACG
TCAAACAAGGCCGCGGCTAAGAACGCCCTTCGACGGAAGAAGGTTCATGA
GAAGAACCTCGAACAGACGACGGCGCAGATCGTTCAGCTAGAACAGCAGA
TCTACTCGATTGAGGCGGCGAATATCAACCAGGAGACTTTGAAGGCTATG
GAGGCGGCTGGTGCGGCGATGGCGAAGATCCATGGCTCCATGACGCTTGA
TACGGTGGATCAGACAATGGATACACTTCGCGAACAGCACCAACTCAGCA
CCGAAATCGCACAAGCCATTACAAGCACCAATCTGGTCGACCAACCAGAC
GAGGCCGATTTGGAAGAGGAACTCGAGGGCTTGGAGCAGGAGGCCATGGA
CGAGCGGATGCTCAACACAGGTACGGTGCCGGTTGCAGACCAACTCAACC
GTTTACCTCCTGCGGCAAATGGAGAAATCAAATCCAAACCTCAGACCGAA
GAGGAAGACGAGGAAGCAGAACTGGAGAAGCTACGTGCGGAAATGGCCAT
GGGATAAATGTGGTCTTGGTTCGGCGGATCCGCCGCTCAGAAGCGGAAAG
ATGCGCCCAAGAATGCGATCCTCATGCTTCGCGAGCAGCTGGATATGCTC
CAAAAGCGCGAGAAGCATTTGGAGAATCTGATGGAGGAGCAGGATGCAAT
TGCTCGGAAGAACGTAACGTCAAACAAGGCCGCGGCTAAGAACGCCCTTC
GACGGAAGAAGGTTCATGAGAAGAACCTCGAACAGACGACGGCGCAGATC
GTTCAGCTAGAACAGCAGATCTACTCGATTGAGGCGGCGAATATCAACCA
GGAGACTTTGAAGGCTATGGAGGCGGCTGGTGCGGCGATGGCGAAGATCC
ATGGCTCCATGACGCTTGATACGGTGGATCAGACAATGGATACACTTCGC
GAACAGCACCAACTCAGCACCGAAATCGCACAAGCCATTACAAGCACCAA
TCTGGTCGACCAACCAGACGAGGCCGATTTGGAAGAGGAACTCGAGGGCT
TGGAGCAGGAGGCCATGGACGAGCGGATGCTCAACACAGGTACGGTGCCG
GTTGCAGACCAACTCAACCGTTTACCTCCTGCGGCAAATGGAGAAATCAA
ATCCAAACCTCAGACCGAAGAGGAAGACGAGGAAGCAGAACTGGAGAAGC
TACGTGCGGAAATGGCCATGGGATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0007034vacuolar transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SNF7ATCC10864_003745Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003745-T1.exon1ATCC10864_003745-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_003745-T1.exon2ATCC10864_003745-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003745-T1.exon3ATCC10864_003745-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_003745-T1.exon4ATCC10864_003745-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003745-T1.cdsATCC10864_003745-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003745-T1ATCC10864_003745-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR005024
PFAMPF03357
Properties
Property NameValue
NoteBUSCO:EOG09264W71
ProductESCRT-III subunit protein snf7
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000068supercontigMCQH01000068:494424..495280 +
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