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ATCC10864_003784-T1, ATCC10864_003784-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003784-T1
Unique NameATCC10864_003784-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000068:593635..595203+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003784-T1 ID=ATCC10864_003784-T1|Name=ATCC10864_003784-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1569bp|location=Sequence derived from alignment at MCQH01000068:593635..595203+ (Aspergillus niger ATCC 10864)
ATGGGGTGAGTTAAGACAATGATCATCATCTGACAAAGGAAGGACATGGG
CTAACGGGTATCTTCTACAACAGTAAGGAGGACAAGACTCACATCAACAT
CGTCGTTATCGGCCACGTCGATTCCGGCAAGTCCACCACCACTGGTCACC
TGATCTACAAGTGCGGTGGTATCGACCAGCGTACCATCGAGAAGTTCGAG
AAGGTAAGGAGGATTATACATCTGAAAAAAGAATATCAAGACATGGTGCT
AACAACATCTTACAGGAAGCCGCTGAGCTCGGTAAGGGTTCCTTCAAGTA
CGCTTGGGTTCTTGACAAGCTCAAGTCCGAGCGTGAGCGTGGTATCACCA
TCGACATTGCCCTCTGGAAGTTCCAGACTGGCAAGTATGAGGTCACCGTC
ATTGGTAAGTACTATTACAGAGTTCTCTCGATCAAATCAACATACTAACG
TACATGATAGACGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCAC
TGGTACCTCCCAGGCTGACTGCGCTATCCTCATCATTGCCTCCGGTACTG
GTGAGTTCGAGGCTGGTATCTCCAAGGATGGCCAGACTCGTGAGCACGCT
CTGCTTGCTTTCACCCTCGGTGTCCGTCAGCTCATTGTTGCCCTCAACAA
GATGGACACCTGCAAGTGGTCCGAGGACCGTTACAACGAAATCGTTAAGG
AGACCTCCAACTTCATCAAGAAGGTCGGCTACAACCCCAAGGGTGTTCCT
TTCGTCCCCATCTCCGGTTTCAACGGTGACAACATGCTCGAGCCCTCCCC
CAACTGCCCCTGGTACAAGGGTTGGGAGAAGGAGACCAAGGCCGGCAAGG
TCACCGGTAAGACCCTCCTCGAGGCCATCGACGCCATCGAGCCCCCCGTC
CGTCCCTCCAACAAGCCCCTCCGTCTTCCCCTCCAGGATGTCTACAAGAT
CTCCGGTATTGGAACTGTTCCCGTCGGTCGTGTCGAGACCGGTATCATTG
CCCCTGGTATGGTCGTGACCTTCGCTCCCGCCAACGTCACCACTGAAGTC
AAGTCCGTTGAGATGCACCACCAGCAGCTCAAGGAGGGTGTCCCCGGTGA
CAACGTTGGTTTCAACGTCAAGAACGTTTCCGTCAAGGAGGTTCGCCGTG
GTAACGTTGCCGGTGACTCCAAGAACGACCCCCCTCTTGGCTGTGAGAGC
TTCACCGCCCAGGTCATCGTCCTCAACCACCCCGGTCAGGTCGGCGCTGG
TTACGCTCCCGTCCTGGACTGCCACACTGCTCACATTGCTTGCAAGTTCG
CTGAGCTCCTTGAGAAGATTGACCGCCGTACCGGAAAGTCTGTTGAATCT
TCCCCCAAGTTCATCAAGTCCGGTGACGCTGCCATCGTCAAGATGATTCC
CTCCAAGCCCATGTGTGTTGAGGCTTTCACTGACTACCCCCCTCTTGGTC
GTTTCGCTGTCCGCGATATGCGCCAGACTGTTGCTGTCGGTGTTATCAAG
GCTGTTGAGAAGAAGGAGGGTGGTTCCGGTAAGGTTACCAAGGCCGCCCA
GAAGGCCGGTAAGAAATAA
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Coding sequence (CDS) from alignment at MCQH01000068:593635..595203+

>ATCC10864_003784-T1 ID=ATCC10864_003784-T1|Name=ATCC10864_003784-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5532bp|location=Sequence derived from alignment at MCQH01000068:593635..595203+ (Aspergillus niger ATCC 10864)
ATGGGTAAGGAGGACAAGACTCACATCAACATCGTCGTTATCGGCCACGT
CGATTCCGGCAAGTCCACCACCACTGGTCACCTGATCTACAAGTGCGGTG
GTATCGACCAGCGTACCATCGAGAAGTTCGAGAAGGAAGCCGCTGAGCTC
GGTAAGGGTTCCTTCAAGTACGCTTGGGTTCTTGACAAGCTCAAGTCCGA
GCGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCCAGACTG
GCAAGTATGAGGTCACCGTCATTGACGCCCCCGGTCACCGTGACTTCATC
AAGAACATGATCACTGGTACCTCCCAGGCTGACTGCGCTATCCTCATCAT
TGCCTCCGGTACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGCCAGA
CTCGTGAGCACGCTCTGCTTGCTTTCACCCTCGGTGTCCGTCAGCTCATT
GTTGCCCTCAACAAGATGGACACCTGCAAGTGGTCCGAGGACCGTTACAA
CGAAATCGTTAAGGAGACCTCCAACTTCATCAAGAAGGTCGGCTACAACC
CCAAGGGTGTTCCTTTCGTCCCCATCTCCGGTTTCAACGGTGACAACATG
CTCGAGCCCTCCCCCAACTGCCCCTGGTACAAGGGTTGGGAGAAGGAGAC
CAAGGCCGGCAAGGTCACCGGTAAGACCCTCCTCGAGGCCATCGACGCCA
TCGAGCCCCCCGTCCGTCCCTCCAACAAGCCCCTCCGTCTTCCCCTCCAG
GATGTCTACAAGATCTCCGGTATTGGAACTGTTCCCGTCGGTCGTGTCGA
GACCGGTATCATTGCCCCTGGTATGGTCGTGACCTTCGCTCCCGCCAACG
TCACCACTGAAGTCAAGTCCGTTGAGATGCACCACCAGCAGCTCAAGGAG
GGTGTCCCCGGTGACAACGTTGGTTTCAACGTCAAGAACGTTTCCGTCAA
GGAGGTTCGCCGTGGTAACGTTGCCGGTGACTCCAAGAACGACCCCCCTC
TTGGCTGTGAGAGCTTCACCGCCCAGGTCATCGTCCTCAACCACCCCGGT
CAGGTCGGCGCTGGTTACGCTCCCGTCCTGGACTGCCACACTGCTCACAT
TGCTTGCAAGTTCGCTGAGCTCCTTGAGAAGATTGACCGCCGTACCGGAA
AGTCTGTTGAATCTTCCCCCAAGTTCATCAAGTCCGGTGACGCTGCCATC
GTCAAGATGATTCCCTCCAAGCCCATGTGTGTTGAGGCTTTCACTGACTA
CCCCCCTCTTGGTCGTTTCGCTGTCCGCGATATGCGCCAGACTGTTGCTG
TCGGTGTTATCAAGGCTGTTGAGAAGAAGGAGGGTGGTTCCGGTAAGGTT
ACCAAGGCCGCCCAGAAGGCCGGTAAGAAATAAATGGGTAAGGAGGACAA
GACTCACATCAACATCGTCGTTATCGGCCACGTCGATTCCGGCAAGTCCA
CCACCACTGGTCACCTGATCTACAAGTGCGGTGGTATCGACCAGCGTACC
ATCGAGAAGTTCGAGAAGGAAGCCGCTGAGCTCGGTAAGGGTTCCTTCAA
GTACGCTTGGGTTCTTGACAAGCTCAAGTCCGAGCGTGAGCGTGGTATCA
CCATCGACATTGCCCTCTGGAAGTTCCAGACTGGCAAGTATGAGGTCACC
GTCATTGACGCCCCCGGTCACCGTGACTTCATCAAGAACATGATCACTGG
TACCTCCCAGGCTGACTGCGCTATCCTCATCATTGCCTCCGGTACTGGTG
AGTTCGAGGCTGGTATCTCCAAGGATGGCCAGACTCGTGAGCACGCTCTG
CTTGCTTTCACCCTCGGTGTCCGTCAGCTCATTGTTGCCCTCAACAAGAT
GGACACCTGCAAGTGGTCCGAGGACCGTTACAACGAAATCGTTAAGGAGA
CCTCCAACTTCATCAAGAAGGTCGGCTACAACCCCAAGGGTGTTCCTTTC
GTCCCCATCTCCGGTTTCAACGGTGACAACATGCTCGAGCCCTCCCCCAA
CTGCCCCTGGTACAAGGGTTGGGAGAAGGAGACCAAGGCCGGCAAGGTCA
CCGGTAAGACCCTCCTCGAGGCCATCGACGCCATCGAGCCCCCCGTCCGT
CCCTCCAACAAGCCCCTCCGTCTTCCCCTCCAGGATGTCTACAAGATCTC
CGGTATTGGAACTGTTCCCGTCGGTCGTGTCGAGACCGGTATCATTGCCC
CTGGTATGGTCGTGACCTTCGCTCCCGCCAACGTCACCACTGAAGTCAAG
TCCGTTGAGATGCACCACCAGCAGCTCAAGGAGGGTGTCCCCGGTGACAA
CGTTGGTTTCAACGTCAAGAACGTTTCCGTCAAGGAGGTTCGCCGTGGTA
ACGTTGCCGGTGACTCCAAGAACGACCCCCCTCTTGGCTGTGAGAGCTTC
ACCGCCCAGGTCATCGTCCTCAACCACCCCGGTCAGGTCGGCGCTGGTTA
CGCTCCCGTCCTGGACTGCCACACTGCTCACATTGCTTGCAAGTTCGCTG
AGCTCCTTGAGAAGATTGACCGCCGTACCGGAAAGTCTGTTGAATCTTCC
CCCAAGTTCATCAAGTCCGGTGACGCTGCCATCGTCAAGATGATTCCCTC
CAAGCCCATGTGTGTTGAGGCTTTCACTGACTACCCCCCTCTTGGTCGTT
TCGCTGTCCGCGATATGCGCCAGACTGTTGCTGTCGGTGTTATCAAGGCT
GTTGAGAAGAAGGAGGGTGGTTCCGGTAAGGTTACCAAGGCCGCCCAGAA
GGCCGGTAAGAAATAAATGGGTAAGGAGGACAAGACTCACATCAACATCG
TCGTTATCGGCCACGTCGATTCCGGCAAGTCCACCACCACTGGTCACCTG
ATCTACAAGTGCGGTGGTATCGACCAGCGTACCATCGAGAAGTTCGAGAA
GGAAGCCGCTGAGCTCGGTAAGGGTTCCTTCAAGTACGCTTGGGTTCTTG
ACAAGCTCAAGTCCGAGCGTGAGCGTGGTATCACCATCGACATTGCCCTC
TGGAAGTTCCAGACTGGCAAGTATGAGGTCACCGTCATTGACGCCCCCGG
TCACCGTGACTTCATCAAGAACATGATCACTGGTACCTCCCAGGCTGACT
GCGCTATCCTCATCATTGCCTCCGGTACTGGTGAGTTCGAGGCTGGTATC
TCCAAGGATGGCCAGACTCGTGAGCACGCTCTGCTTGCTTTCACCCTCGG
TGTCCGTCAGCTCATTGTTGCCCTCAACAAGATGGACACCTGCAAGTGGT
CCGAGGACCGTTACAACGAAATCGTTAAGGAGACCTCCAACTTCATCAAG
AAGGTCGGCTACAACCCCAAGGGTGTTCCTTTCGTCCCCATCTCCGGTTT
CAACGGTGACAACATGCTCGAGCCCTCCCCCAACTGCCCCTGGTACAAGG
GTTGGGAGAAGGAGACCAAGGCCGGCAAGGTCACCGGTAAGACCCTCCTC
GAGGCCATCGACGCCATCGAGCCCCCCGTCCGTCCCTCCAACAAGCCCCT
CCGTCTTCCCCTCCAGGATGTCTACAAGATCTCCGGTATTGGAACTGTTC
CCGTCGGTCGTGTCGAGACCGGTATCATTGCCCCTGGTATGGTCGTGACC
TTCGCTCCCGCCAACGTCACCACTGAAGTCAAGTCCGTTGAGATGCACCA
CCAGCAGCTCAAGGAGGGTGTCCCCGGTGACAACGTTGGTTTCAACGTCA
AGAACGTTTCCGTCAAGGAGGTTCGCCGTGGTAACGTTGCCGGTGACTCC
AAGAACGACCCCCCTCTTGGCTGTGAGAGCTTCACCGCCCAGGTCATCGT
CCTCAACCACCCCGGTCAGGTCGGCGCTGGTTACGCTCCCGTCCTGGACT
GCCACACTGCTCACATTGCTTGCAAGTTCGCTGAGCTCCTTGAGAAGATT
GACCGCCGTACCGGAAAGTCTGTTGAATCTTCCCCCAAGTTCATCAAGTC
CGGTGACGCTGCCATCGTCAAGATGATTCCCTCCAAGCCCATGTGTGTTG
AGGCTTTCACTGACTACCCCCCTCTTGGTCGTTTCGCTGTCCGCGATATG
CGCCAGACTGTTGCTGTCGGTGTTATCAAGGCTGTTGAGAAGAAGGAGGG
TGGTTCCGGTAAGGTTACCAAGGCCGCCCAGAAGGCCGGTAAGAAATAAA
TGGGTAAGGAGGACAAGACTCACATCAACATCGTCGTTATCGGCCACGTC
GATTCCGGCAAGTCCACCACCACTGGTCACCTGATCTACAAGTGCGGTGG
TATCGACCAGCGTACCATCGAGAAGTTCGAGAAGGAAGCCGCTGAGCTCG
GTAAGGGTTCCTTCAAGTACGCTTGGGTTCTTGACAAGCTCAAGTCCGAG
CGTGAGCGTGGTATCACCATCGACATTGCCCTCTGGAAGTTCCAGACTGG
CAAGTATGAGGTCACCGTCATTGACGCCCCCGGTCACCGTGACTTCATCA
AGAACATGATCACTGGTACCTCCCAGGCTGACTGCGCTATCCTCATCATT
GCCTCCGGTACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGCCAGAC
TCGTGAGCACGCTCTGCTTGCTTTCACCCTCGGTGTCCGTCAGCTCATTG
TTGCCCTCAACAAGATGGACACCTGCAAGTGGTCCGAGGACCGTTACAAC
GAAATCGTTAAGGAGACCTCCAACTTCATCAAGAAGGTCGGCTACAACCC
CAAGGGTGTTCCTTTCGTCCCCATCTCCGGTTTCAACGGTGACAACATGC
TCGAGCCCTCCCCCAACTGCCCCTGGTACAAGGGTTGGGAGAAGGAGACC
AAGGCCGGCAAGGTCACCGGTAAGACCCTCCTCGAGGCCATCGACGCCAT
CGAGCCCCCCGTCCGTCCCTCCAACAAGCCCCTCCGTCTTCCCCTCCAGG
ATGTCTACAAGATCTCCGGTATTGGAACTGTTCCCGTCGGTCGTGTCGAG
ACCGGTATCATTGCCCCTGGTATGGTCGTGACCTTCGCTCCCGCCAACGT
CACCACTGAAGTCAAGTCCGTTGAGATGCACCACCAGCAGCTCAAGGAGG
GTGTCCCCGGTGACAACGTTGGTTTCAACGTCAAGAACGTTTCCGTCAAG
GAGGTTCGCCGTGGTAACGTTGCCGGTGACTCCAAGAACGACCCCCCTCT
TGGCTGTGAGAGCTTCACCGCCCAGGTCATCGTCCTCAACCACCCCGGTC
AGGTCGGCGCTGGTTACGCTCCCGTCCTGGACTGCCACACTGCTCACATT
GCTTGCAAGTTCGCTGAGCTCCTTGAGAAGATTGACCGCCGTACCGGAAA
GTCTGTTGAATCTTCCCCCAAGTTCATCAAGTCCGGTGACGCTGCCATCG
TCAAGATGATTCCCTCCAAGCCCATGTGTGTTGAGGCTTTCACTGACTAC
CCCCCTCTTGGTCGTTTCGCTGTCCGCGATATGCGCCAGACTGTTGCTGT
CGGTGTTATCAAGGCTGTTGAGAAGAAGGAGGGTGGTTCCGGTAAGGTTA
CCAAGGCCGCCCAGAAGGCCGGTAAGAAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006414translational elongation
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0003746translation elongation factor activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TEF1ATCC10864_003784Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003784-T1.exon1ATCC10864_003784-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_003784-T1.exon2ATCC10864_003784-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003784-T1.exon3ATCC10864_003784-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_003784-T1.exon4ATCC10864_003784-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003784-T1.cdsATCC10864_003784-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003784-T1ATCC10864_003784-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR031157
PFAMPF03143
InterProIPR004160
InterProIPR004539
PFAMPF00009
InterProIPR009000
InterProIPR004161
PFAMPF03144
InterProIPR000795
InterProIPR009001
InterProIPR027417
Properties
Property NameValue
Producttranslation elongation factor EF-1 alpha
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000068supercontigMCQH01000068:593635..595203 +
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