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ATCC10864_003812-T1, ATCC10864_003812-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003812-T1
Unique NameATCC10864_003812-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000068:667733..668210+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003812-T1 ID=ATCC10864_003812-T1|Name=ATCC10864_003812-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=478bp|location=Sequence derived from alignment at MCQH01000068:667733..668210+ (Aspergillus niger ATCC 10864)
ATGTTTCCCACGCGAGCTCTCTTCTCCCGCTCGGTCTGGAAGGGTGAGAA
TACCCCATCGAAGTCCCTATTTTAAATCACTGGAGAAATTGAATCCATCT
AACCTGCATACCTACAGGCCCGAACATCGTCCCGTACGTCGTCGCATTTA
TTCCCTTTCCTTCCCTACCTTTCACGAAAGGCACATCACTACCCAATCCC
TATACAATACCGCCACATATCAATTGCAACCGCTACTCGACACATTCTCT
ACTGGAAACTGGAAATAAAATACTAATAAAAGCTATGATAGTCTCCCTCT
CCCCCGCAAACTCCCCGCTCCGCCAGGAACACCACCGATCAAGACGCAGA
AGCGCGGCGCCACGATCCTGCCTAACTTCGTGGGATTGAAGTTCCAGGTC
CACAATGGGAAGATTTATCAGGATGTTGTGATCACGGAGGAGATGGTCGG
CAGGAAGTTGGGGGAGTTTGTTGCGTGA
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Coding sequence (CDS) from alignment at MCQH01000068:667733..668210+

>ATCC10864_003812-T1 ID=ATCC10864_003812-T1|Name=ATCC10864_003812-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=738bp|location=Sequence derived from alignment at MCQH01000068:667733..668210+ (Aspergillus niger ATCC 10864)
ATGTTTCCCACGCGAGCTCTCTTCTCCCGCTCGGTCTGGAAGGGCCCGAA
CATCGTCCCTCTCCCTCTCCCCCGCAAACTCCCCGCTCCGCCAGGAACAC
CACCGATCAAGACGCAGAAGCGCGGCGCCACGATCCTGCCTAACTTCGTG
GGATTGAAGTTCCAGGTCCACAATGGGAAGATTTATCAGGATGTTGTGAT
CACGGAGGAGATGGTCGGCAGGAAGTTGGGGGAGTTTGTTGCGTGAATGT
TTCCCACGCGAGCTCTCTTCTCCCGCTCGGTCTGGAAGGGCCCGAACATC
GTCCCTCTCCCTCTCCCCCGCAAACTCCCCGCTCCGCCAGGAACACCACC
GATCAAGACGCAGAAGCGCGGCGCCACGATCCTGCCTAACTTCGTGGGAT
TGAAGTTCCAGGTCCACAATGGGAAGATTTATCAGGATGTTGTGATCACG
GAGGAGATGGTCGGCAGGAAGTTGGGGGAGTTTGTTGCGTGAATGTTTCC
CACGCGAGCTCTCTTCTCCCGCTCGGTCTGGAAGGGCCCGAACATCGTCC
CTCTCCCTCTCCCCCGCAAACTCCCCGCTCCGCCAGGAACACCACCGATC
AAGACGCAGAAGCGCGGCGCCACGATCCTGCCTAACTTCGTGGGATTGAA
GTTCCAGGTCCACAATGGGAAGATTTATCAGGATGTTGTGATCACGGAGG
AGATGGTCGGCAGGAAGTTGGGGGAGTTTGTTGCGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RSM19ATCC10864_003812Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003812-T1.exon1ATCC10864_003812-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_003812-T1.exon2ATCC10864_003812-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003812-T1.exon3ATCC10864_003812-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003812-T1.cdsATCC10864_003812-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003812-T1ATCC10864_003812-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00203
InterProIPR002222
InterProIPR023575
Properties
Property NameValue
Productmitochondrial ribosomal small subunit component
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000068supercontigMCQH01000068:667733..668210 +
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