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ATCC10864_003892-T1, ATCC10864_003892-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003892-T1
Unique NameATCC10864_003892-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000069:266097..267363-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003892-T1 ID=ATCC10864_003892-T1|Name=ATCC10864_003892-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1267bp|location=Sequence derived from alignment at MCQH01000069:266097..267363- (Aspergillus niger ATCC 10864)
ATGGACTACGAGATGGATATCGAGCCCACCGGGCCCCAAGTCACCGTTCG
CGAAGTGAGTTGACCTCTGACCAATCTACCAATTACACCATCTATACCAA
CACCAGCCCATGCAACACAATCACCCCATCGAACCTTTCCAACCATCCTT
ACTAACACTTTGAATCTTAATAGGCCGAACCCACTCGCGTTGACTTTAAA
CTCACCTCGGTCGACCTCGCTTTCGCCAACTCCCTCCGCCGAGTAATGCT
CTCCGAAATCCCCACGATGGCCATCGACCTCGTCGAAGTGGAAAAGAACA
CCTCCGTACTGCCCGACGAATTCCTCGCTCACCGTCTCGGCCTTATCCCC
CTGATCAGCAAAAACTGCGACCAAGACGTCGAATACACGCGCGACTGCGA
ATGCGAGGACCACTGCGCGCGCTGCTCCGTGACCCTGTCGCTCCATGCGC
GGTGCACAGGCGACGATATCATGCGGGTGTATGCGCGCGATCTCGTGGTA
TCAGGAGAACGGGCGAACGAGTGGGTGGGAAACCCGGTGATCTTGGATCC
GGAGGGAAACGGGCCCTTGATTTGTAAATTGAGACGCGGCCAGGAGTTGA
AGATGACGTGTATTGCGAAGAAGGGTATTGCGAAGGAACATGCGAAGTGG
ATGCCCACGTCGGCGATTGGGTTTGAATATGATCCGCATAATAATTTGAG
ACATGTGGATTACTGGTATGAGGAGGATCCGGCGAAGGAATGGTATGTTT
TATCCCAAACCCTCATTTTCATTTTACTTCTATTCCAGCACCTTTCTGCA
TCGCATACTACAGAGCAAGGGAATTCTACATGAGCGAGCAAAGATCAATG
AGCTAATAGTACAACCAATACAGGCCCGTCTCAGCCAACGCAGGATGGGA
ACAGCCTGCTCCCCCAGACCAACCATTCGACTACGACGCCCAGCCCAACA
GCTTCTACATCGACGTCGAGAGCATCGGCACCCTTGAACCGGACATGATC
ATCCAGCAAGGAATCACAGTGTTGCAACGGAAGCTCGCCTCTGTGATATC
CTCGTTATCAGGCACCGAAGGCGCAGACCGCAACGGCGTCATGGGCGGTG
ACGACGAAGATATGATGGGTGTGCGCAGCCCGGATGCCTACGAACCGCCC
GAGGGTATGGACGGTGGCTTTACGGCGTATGCGAATGGTGGAGGCGCTAG
CGCATGGGGTCCTAGTGCTACGACGCCATATGGAGTCACGCCATATGGGG
GTGGATATGGATTCTAA
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Coding sequence (CDS) from alignment at MCQH01000069:266097..267363-

>ATCC10864_003892-T1 ID=ATCC10864_003892-T1|Name=ATCC10864_003892-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3051bp|location=Sequence derived from alignment at MCQH01000069:266097..267363- (Aspergillus niger ATCC 10864)
GCCCGTCTCAGCCAACGCAGGATGGGAACAGCCTGCTCCCCCAGACCAAC
CATTCGACTACGACGCCCAGCCCAACAGCTTCTACATCGACGTCGAGAGC
ATCGGCACCCTTGAACCGGACATGATCATCCAGCAAGGAATCACAGTGTT
GCAACGGAAGCTCGCCTCTGTGATATCCTCGTTATCAGGCACCGAAGGCG
CAGACCGCAACGGCGTCATGGGCGGTGACGACGAAGATATGATGGGTGTG
CGCAGCCCGGATGCCTACGAACCGCCCGAGGGTATGGACGGTGGCTTTAC
GGCGTATGCGAATGGTGGAGGCGCTAGCGCATGGGGTCCTAGTGCTACGA
CGCCATATGGAGTCACGCCATATGGGGGTGGATATGGATTCTAAGCCGAA
CCCACTCGCGTTGACTTTAAACTCACCTCGGTCGACCTCGCTTTCGCCAA
CTCCCTCCGCCGAGTAATGCTCTCCGAAATCCCCACGATGGCCATCGACC
TCGTCGAAGTGGAAAAGAACACCTCCGTACTGCCCGACGAATTCCTCGCT
CACCGTCTCGGCCTTATCCCCCTGATCAGCAAAAACTGCGACCAAGACGT
CGAATACACGCGCGACTGCGAATGCGAGGACCACTGCGCGCGCTGCTCCG
TGACCCTGTCGCTCCATGCGCGGTGCACAGGCGACGATATCATGCGGGTG
TATGCGCGCGATCTCGTGGTATCAGGAGAACGGGCGAACGAGTGGGTGGG
AAACCCGGTGATCTTGGATCCGGAGGGAAACGGGCCCTTGATTTGTAAAT
TGAGACGCGGCCAGGAGTTGAAGATGACGTGTATTGCGAAGAAGGGTATT
GCGAAGGAACATGCGAAGTGGATGCCCACGTCGGCGATTGGGTTTGAATA
TGATCCGCATAATAATTTGAGACATGTGGATTACTGGTATGAGGAGGATC
CGGCGAAGGAATGATGGACTACGAGATGGATATCGAGCCCACCGGGCCCC
AAGTCACCGTTCGCGAAGCCCGTCTCAGCCAACGCAGGATGGGAACAGCC
TGCTCCCCCAGACCAACCATTCGACTACGACGCCCAGCCCAACAGCTTCT
ACATCGACGTCGAGAGCATCGGCACCCTTGAACCGGACATGATCATCCAG
CAAGGAATCACAGTGTTGCAACGGAAGCTCGCCTCTGTGATATCCTCGTT
ATCAGGCACCGAAGGCGCAGACCGCAACGGCGTCATGGGCGGTGACGACG
AAGATATGATGGGTGTGCGCAGCCCGGATGCCTACGAACCGCCCGAGGGT
ATGGACGGTGGCTTTACGGCGTATGCGAATGGTGGAGGCGCTAGCGCATG
GGGTCCTAGTGCTACGACGCCATATGGAGTCACGCCATATGGGGGTGGAT
ATGGATTCTAAGCCGAACCCACTCGCGTTGACTTTAAACTCACCTCGGTC
GACCTCGCTTTCGCCAACTCCCTCCGCCGAGTAATGCTCTCCGAAATCCC
CACGATGGCCATCGACCTCGTCGAAGTGGAAAAGAACACCTCCGTACTGC
CCGACGAATTCCTCGCTCACCGTCTCGGCCTTATCCCCCTGATCAGCAAA
AACTGCGACCAAGACGTCGAATACACGCGCGACTGCGAATGCGAGGACCA
CTGCGCGCGCTGCTCCGTGACCCTGTCGCTCCATGCGCGGTGCACAGGCG
ACGATATCATGCGGGTGTATGCGCGCGATCTCGTGGTATCAGGAGAACGG
GCGAACGAGTGGGTGGGAAACCCGGTGATCTTGGATCCGGAGGGAAACGG
GCCCTTGATTTGTAAATTGAGACGCGGCCAGGAGTTGAAGATGACGTGTA
TTGCGAAGAAGGGTATTGCGAAGGAACATGCGAAGTGGATGCCCACGTCG
GCGATTGGGTTTGAATATGATCCGCATAATAATTTGAGACATGTGGATTA
CTGGTATGAGGAGGATCCGGCGAAGGAATGATGGACTACGAGATGGATAT
CGAGCCCACCGGGCCCCAAGTCACCGTTCGCGAAGCCCGTCTCAGCCAAC
GCAGGATGGGAACAGCCTGCTCCCCCAGACCAACCATTCGACTACGACGC
CCAGCCCAACAGCTTCTACATCGACGTCGAGAGCATCGGCACCCTTGAAC
CGGACATGATCATCCAGCAAGGAATCACAGTGTTGCAACGGAAGCTCGCC
TCTGTGATATCCTCGTTATCAGGCACCGAAGGCGCAGACCGCAACGGCGT
CATGGGCGGTGACGACGAAGATATGATGGGTGTGCGCAGCCCGGATGCCT
ACGAACCGCCCGAGGGTATGGACGGTGGCTTTACGGCGTATGCGAATGGT
GGAGGCGCTAGCGCATGGGGTCCTAGTGCTACGACGCCATATGGAGTCAC
GCCATATGGGGGTGGATATGGATTCTAAGCCGAACCCACTCGCGTTGACT
TTAAACTCACCTCGGTCGACCTCGCTTTCGCCAACTCCCTCCGCCGAGTA
ATGCTCTCCGAAATCCCCACGATGGCCATCGACCTCGTCGAAGTGGAAAA
GAACACCTCCGTACTGCCCGACGAATTCCTCGCTCACCGTCTCGGCCTTA
TCCCCCTGATCAGCAAAAACTGCGACCAAGACGTCGAATACACGCGCGAC
TGCGAATGCGAGGACCACTGCGCGCGCTGCTCCGTGACCCTGTCGCTCCA
TGCGCGGTGCACAGGCGACGATATCATGCGGGTGTATGCGCGCGATCTCG
TGGTATCAGGAGAACGGGCGAACGAGTGGGTGGGAAACCCGGTGATCTTG
GATCCGGAGGGAAACGGGCCCTTGATTTGTAAATTGAGACGCGGCCAGGA
GTTGAAGATGACGTGTATTGCGAAGAAGGGTATTGCGAAGGAACATGCGA
AGTGGATGCCCACGTCGGCGATTGGGTTTGAATATGATCCGCATAATAAT
TTGAGACATGTGGATTACTGGTATGAGGAGGATCCGGCGAAGGAATGATG
GACTACGAGATGGATATCGAGCCCACCGGGCCCCAAGTCACCGTTCGCGA
A
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003899DNA-directed 5'-3' RNA polymerase activity
GO:0046983protein dimerization activity
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003892ATCC10864_003892Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003892-T1ATCC10864_003892-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003892-T1.cdsATCC10864_003892-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003892-T1.exon3ATCC10864_003892-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_003892-T1.exon2ATCC10864_003892-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003892-T1.exon1ATCC10864_003892-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036643
PFAMPF01000
InterProIPR001514
InterProIPR011263
PFAMPF01193
InterProIPR036603
InterProIPR011262
Properties
Property NameValue
NoteBUSCO:EOG09263PXH
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000069supercontigMCQH01000069:266097..267363 -
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