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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000072:347340..349157+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_004127-T1 ID=ATCC10864_004127-T1|Name=ATCC10864_004127-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1818bp|location=Sequence derived from alignment at MCQH01000072:347340..349157+ (Aspergillus niger ATCC 10864)
ATGCATTCCTACGTGCGACCAAATCAATTCGTCGCCTTCAAGCTCCCCTC
CGAGGCGACGAGGATCCAGAAAGTCGTTCCCAATACGTATGCGCGCAACT
TGCTCCAATCTCTCAGGAATCGCACAGTGCTAATTATATTTTACAGACAA
ATTTCTCTAGGAAAATACGGTGCTTTCCCCGCCAACCAGATCATTGGCCG
CCCCTTCTACCTGACCTTCGAGATCCACGAAATCCCCGGACAAGCTGATA
GCACCTACCTCCGTATCGTATCGGCGGCGGAACTTCACGCGGAATCCCTC
ATCACCGAGGGCGAAGGCGACGGCGATGATGTGGAGGTCAATGAAGACGG
CACCCCGGTGCGGTCGAATCGCGAAACCATCGACGACCGATCCACGCAAA
AGCTAACGCTAGAGGAGATTCTGGCGCTGAAGAAGGAAAGCACCGGGGCG
GGAAGGGAAATTATTGCGAAGCTGCTGGAGTCGCATCAGGCTTTGGATCA
GAAGACGGCATTCTCACTGGCCAAGTATAAGTTGCGGAAGGAGAAGAAGT
ACATGAAGCGGTTCACAGTGATTCCGTTGGATGTCAGTCTCTTGACGAAC
TATATGCTTGAGGACAAGGATGCAGCTCGGACTATGGAATTGCGCGACGA
GCTCATCGGGCTGATTGGGTGTTGGGGAAATGTACATCATGGTGGAAGCA
CCTCTTTTGACGAGACTGTTACGTCGAAACCGAATGGTCGCTATCTGGTT
GTTGATGATACGGGCGGTCTGGTCGTCGCAGCTTTGGCTGAGAGAATGGG
TATCCTGTACCCTCACGATGGCGAGAACGACCAGGAGCAACAGGACGCCA
TTGAGCGACCTGCCGCGGCGGAAGCTGATGAGGCAGAGAAGCCCCAAGAC
GGCGAAGAGAAAGCCCAGGATGGAGAGGAGCAATCCACGACGACCACACA
TCGCCCACCCCGTCGACCCCAGATGTCCGCTTCAGGAAACACTATCACCC
TTCTCCACGCCAACAAGCAGCCTAACCTAAGTCTCCTGAAATACTTTGGC
TACGAACAAGACAGCCCGAGCGATACACATCCCCTCTACACAAACCTCAA
GACCGTCTCCTTCATGCAGCTGCTCGACCCCATGGCGGACAACATCTACT
CCGAGGAGCCGTCAGTAGTACCCGAAGAAGAGCTTGCTACATACAAGGCC
AGCAAGCGTAGCGCCTACCACCGCAAGCGCGGGCGTTGGATGCGCGTCCG
CAAGGTAGTCGACGAAGCTCGGGCCGGCGGCTTCGATGGTCTCATTATCG
CCTCTCTAATGAGCCCGACGAGTATCCTGAAATACACTGTCCCATTGGTG
GGAGGCTCGGCACCGATTACTATCTACTCACCCACCGTTGAACCGTTGAC
AGAGGTAATGGACTTGTATTCGACAGCGCGCAAGAACGCCTACATCGCTC
GGAAGCGTGAGCTACAAGAACAGCAACAGGCTGAGGGCCAGGATGAGTCT
GGCAAGATGCGCCCTGCACTGGAAGAGGAATTCACAGTCGACCCTACCAT
GTTGCTTGCGCCGACACTGCAGACCTCCCGAGTACGTGTCTGGCAGGTCC
TTCCTGGGCGGACACATCCGTTGATGTCGGGACGTGGTGGTGCAGAAGGG
TACATCTTCCATGGCATCCGGGTCATCCCGACGCAGGAGATCATTGAGGC
AGCTGGAAATCCAGGCCGGAAGAGGAGGAAGGTGACCAAGGAGACAGAGA
CACCGACGCAGACGCAAACTCCGACGGAGACGCAGACAGGCAGCGGGGAT
GTGGAGATGACGTCGTGA back to topCoding sequence (CDS) from alignment at MCQH01000072:347340..349157+ >ATCC10864_004127-T1 ID=ATCC10864_004127-T1|Name=ATCC10864_004127-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1818bp|location=Sequence derived from alignment at MCQH01000072:347340..349157+ (Aspergillus niger ATCC 10864)
ATGCATTCCTACGTGCGACCAAATCAATTCGTCGCCTTCAAGCTCCCCTC
CGAGGCGACGAGGATCCAGAAAGTCGTTCCCAATACGTATGCGCGCAACT
TGCTCCAATCTCTCAGGAATCGCACAGTGCTAATTATATTTTACAGACAA
ATTTCTCTAGGAAAATACGGTGCTTTCCCCGCCAACCAGATCATTGGCCG
CCCCTTCTACCTGACCTTCGAGATCCACGAAATCCCCGGACAAGCTGATA
GCACCTACCTCCGTATCGTATCGGCGGCGGAACTTCACGCGGAATCCCTC
ATCACCGAGGGCGAAGGCGACGGCGATGATGTGGAGGTCAATGAAGACGG
CACCCCGGTGCGGTCGAATCGCGAAACCATCGACGACCGATCCACGCAAA
AGCTAACGCTAGAGGAGATTCTGGCGCTGAAGAAGGAAAGCACCGGGGCG
GGAAGGGAAATTATTGCGAAGCTGCTGGAGTCGCATCAGGCTTTGGATCA
GAAGACGGCATTCTCACTGGCCAAGTATAAGTTGCGGAAGGAGAAGAAGT
ACATGAAGCGGTTCACAGTGATTCCGTTGGATGTCAGTCTCTTGACGAAC
TATATGCTTGAGGACAAGGATGCAGCTCGGACTATGGAATTGCGCGACGA
GCTCATCGGGCTGATTGGGTGTTGGGGAAATGTACATCATGGTGGAAGCA
CCTCTTTTGACGAGACTGTTACGTCGAAACCGAATGGTCGCTATCTGGTT
GTTGATGATACGGGCGGTCTGGTCGTCGCAGCTTTGGCTGAGAGAATGGG
TATCCTGTACCCTCACGATGGCGAGAACGACCAGGAGCAACAGGACGCCA
TTGAGCGACCTGCCGCGGCGGAAGCTGATGAGGCAGAGAAGCCCCAAGAC
GGCGAAGAGAAAGCCCAGGATGGAGAGGAGCAATCCACGACGACCACACA
TCGCCCACCCCGTCGACCCCAGATGTCCGCTTCAGGAAACACTATCACCC
TTCTCCACGCCAACAAGCAGCCTAACCTAAGTCTCCTGAAATACTTTGGC
TACGAACAAGACAGCCCGAGCGATACACATCCCCTCTACACAAACCTCAA
GACCGTCTCCTTCATGCAGCTGCTCGACCCCATGGCGGACAACATCTACT
CCGAGGAGCCGTCAGTAGTACCCGAAGAAGAGCTTGCTACATACAAGGCC
AGCAAGCGTAGCGCCTACCACCGCAAGCGCGGGCGTTGGATGCGCGTCCG
CAAGGTAGTCGACGAAGCTCGGGCCGGCGGCTTCGATGGTCTCATTATCG
CCTCTCTAATGAGCCCGACGAGTATCCTGAAATACACTGTCCCATTGGTG
GGAGGCTCGGCACCGATTACTATCTACTCACCCACCGTTGAACCGTTGAC
AGAGGTAATGGACTTGTATTCGACAGCGCGCAAGAACGCCTACATCGCTC
GGAAGCGTGAGCTACAAGAACAGCAACAGGCTGAGGGCCAGGATGAGTCT
GGCAAGATGCGCCCTGCACTGGAAGAGGAATTCACAGTCGACCCTACCAT
GTTGCTTGCGCCGACACTGCAGACCTCCCGAGTACGTGTCTGGCAGGTCC
TTCCTGGGCGGACACATCCGTTGATGTCGGGACGTGGTGGTGCAGAAGGG
TACATCTTCCATGGCATCCGGGTCATCCCGACGCAGGAGATCATTGAGGC
AGCTGGAAATCCAGGCCGGAAGAGGAGGAAGGTGACCAAGGAGACAGAGA
CACCGACGCAGACGCAAACTCCGACGGAGACGCAGACAGGCAGCGGGGAT
GTGGAGATGACGTCGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0030488 | tRNA methylation |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0031515 | tRNA (m1A) methyltransferase complex |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09261I0F |
| Product | tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000072 | supercontig | MCQH01000072:347340..349157 + |
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