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ATCC10864_004151-T1, ATCC10864_004151-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004151-T1
Unique NameATCC10864_004151-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000072:409614..410468-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004151-T1 ID=ATCC10864_004151-T1|Name=ATCC10864_004151-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=855bp|location=Sequence derived from alignment at MCQH01000072:409614..410468- (Aspergillus niger ATCC 10864)
ATGCCTGGTGGAAAGGGAAAGTCTATCGGTGGAAAGGCCGGCTCCAAGGA CTCTGCGGGGAAGAGCCAGAAGTCCCACAGCGCAAAGGCTGGTCTGCAGG TCCGTATTAGTCGTTCTTTTTTTCTCCTCCTGGCAGGCATATGACGCTTG ACCCATCTCATGGGTTCTGGCGGCGACATGCCGCTGAAGCCGTTACGGCC TGGGATTTTGCTTTTTGCCTCCTTTGCCCCTCGCGATCGCCTCTATGTTG CCAAAAGCACGCGTATAGCTCTTTTATATTGAATAATACCCCTTTAAGAG CTATACCGCACCGGCTAGTCACAGTTCAGGCGACAGGGTTGCGAGGGGTG GCGGTCATGATCCCTCCCGTATTTACCTTCAAAGCTTCACTTCACACATT CATGCCTATCTATTATCATCAGTTTCATTCGCTAACATTATCCTTCGATC ACAGTTCCCTTGCGGTCGTGTTAAGCGCTTTTTGAAGAACAACACCCAGA ACAAGATGCGCGTTGGCGCCAAAGGTACGACCCTTTCCATTCAGCCTACA GAAGGCGCACCTTCCTTTGTCTCCTCTTTCAACCATGCTGACAAATCCCG ATCGCAGCCGCCGTGTATGTCACCGCTGTTCTCGAATATCTGACCGCAGA AGTTCTCGAATTGGCCGGAAACGCTGCCAAGGATCTCAAAGTCAAGCGTA TCACCCCGCGTCATCTGCAGCTCGCCATCCGTGGAGATGAGGAGCTGGAT ACCCTGATCCGCGCCACTATTGCCTTCGGAGGTGTTCTGCCGCGCATCAA CCGCGCGCTCTTGCTGAAGGTGGAGCAAAAGAAGAAGAACAAGACTGAGG CTTAA
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Coding sequence (CDS) from alignment at MCQH01000072:409614..410468-

>ATCC10864_004151-T1 ID=ATCC10864_004151-T1|Name=ATCC10864_004151-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1251bp|location=Sequence derived from alignment at MCQH01000072:409614..410468- (Aspergillus niger ATCC 10864)
CCGCCGTGTATGTCACCGCTGTTCTCGAATATCTGACCGCAGAAGTTCTC
GAATTGGCCGGAAACGCTGCCAAGGATCTCAAAGTCAAGCGTATCACCCC
GCGTCATCTGCAGCTCGCCATCCGTGGAGATGAGGAGCTGGATACCCTGA
TCCGCGCCACTATTGCCTTCGGAGGTGTTCTGCCGCGCATCAACCGCGCG
CTCTTGCTGAAGGTGGAGCAAAAGAAGAAGAACAAGACTGAGGCTTAATT
CCCTTGCGGTCGTGTTAAGCGCTTTTTGAAGAACAACACCCAGAACAAGA
TGCGCGTTGGCGCCAAAGATGCCTGGTGGAAAGGGAAAGTCTATCGGTGG
AAAGGCCGGCTCCAAGGACTCTGCGGGGAAGAGCCAGAAGTCCCACAGCG
CAAAGGCTGGTCTGCAGCCGCCGTGTATGTCACCGCTGTTCTCGAATATC
TGACCGCAGAAGTTCTCGAATTGGCCGGAAACGCTGCCAAGGATCTCAAA
GTCAAGCGTATCACCCCGCGTCATCTGCAGCTCGCCATCCGTGGAGATGA
GGAGCTGGATACCCTGATCCGCGCCACTATTGCCTTCGGAGGTGTTCTGC
CGCGCATCAACCGCGCGCTCTTGCTGAAGGTGGAGCAAAAGAAGAAGAAC
AAGACTGAGGCTTAATTCCCTTGCGGTCGTGTTAAGCGCTTTTTGAAGAA
CAACACCCAGAACAAGATGCGCGTTGGCGCCAAAGATGCCTGGTGGAAAG
GGAAAGTCTATCGGTGGAAAGGCCGGCTCCAAGGACTCTGCGGGGAAGAG
CCAGAAGTCCCACAGCGCAAAGGCTGGTCTGCAGCCGCCGTGTATGTCAC
CGCTGTTCTCGAATATCTGACCGCAGAAGTTCTCGAATTGGCCGGAAACG
CTGCCAAGGATCTCAAAGTCAAGCGTATCACCCCGCGTCATCTGCAGCTC
GCCATCCGTGGAGATGAGGAGCTGGATACCCTGATCCGCGCCACTATTGC
CTTCGGAGGTGTTCTGCCGCGCATCAACCGCGCGCTCTTGCTGAAGGTGG
AGCAAAAGAAGAAGAACAAGACTGAGGCTTAATTCCCTTGCGGTCGTGTT
AAGCGCTTTTTGAAGAACAACACCCAGAACAAGATGCGCGTTGGCGCCAA
AGATGCCTGGTGGAAAGGGAAAGTCTATCGGTGGAAAGGCCGGCTCCAAG
GACTCTGCGGGGAAGAGCCAGAAGTCCCACAGCGCAAAGGCTGGTCTGCA
G
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0046982protein heterodimerization activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
HTZ1ATCC10864_004151Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004151-T1ATCC10864_004151-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004151-T1.cdsATCC10864_004151-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004151-T1.exon3ATCC10864_004151-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_004151-T1.exon2ATCC10864_004151-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004151-T1.exon1ATCC10864_004151-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR007125
PFAMPF16211
InterProIPR032454
PFAMPF00808
InterProIPR009072
PFAMPF00125
InterProIPR002119
Properties
Property NameValue
Producthistone H2A.Z
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000072supercontigMCQH01000072:409614..410468 -