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ATCC10864_004224-T1, ATCC10864_004224-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004224-T1
Unique NameATCC10864_004224-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000073:28556..30260+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004224-T1 ID=ATCC10864_004224-T1|Name=ATCC10864_004224-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1705bp|location=Sequence derived from alignment at MCQH01000073:28556..30260+ (Aspergillus niger ATCC 10864)
ATGTCTATGATTACCACTTCCGCTTGGGTGCGGCGCGGAGTCGCTGCTCA
GTTCCCTACGAAATATGAGATCAATGAGGAGGAAATGGATCGCATATCGA
AGCTTGCGCGTATGCAGCTTGAAGAGGCGCAGGGTGATTTGAAGGCTGCG
CAGGAGGATGAGGAGATGGAGGAGGATAAGAAGGAGGGTGCGGATGATGC
TATGGAGGATGATTCCAAGGAAGAGGAGGAGGAGGAGAAGAAGAAGAAGG
AGGGTGCTGCAGAGTGAGTTGTCCCGTTGTATACCATTGGGTTTGGTTCG
CGTCGGGCAATGAGGGACGAATGCTAACATATTTGATGATGAAAGTGACG
ACGACGACCTGAAGGAATACGATCTGGATCACTACGATAGCGACGAGGTC
GACGAGGACGGCGAGAAGATCACCATGTTCGGCAATGTCAAGTCGCTCGC
TTATCACCAGCCCAACGAGGAGGACCCGTACCTGGTTATGCCGCCGGAGG
AGGAAGACGAGGAGAGAGAGGAACTGCAGATTATGCCGACGGATAACCTG
CTGTTGGCGGGTAAGGTTGAGGACGAGGTTGCTCATCTGGAAGTCTACGT
CTACGAGGATGCCGCCGACAACCTTTACGTGCACCACGATATCATGCTGC
CCGCTATTCCGTTGGCGCTAGAGTGGTTGGACATCCCCGTTGGCAAGACG
GCCGAGGGCCGCACTACCGGTAACTTCGTGGCTATCGGAACAATGGAACC
CGACATTGAGATCTGGGACCTCGATGTCGTCGACAGCATGTACCCCAACG
CGATCCTGGGCCAGGGTGGTGCCGATGCCGAGAACGGCGCGAAGAAGTCC
AAGAAGAAGAAGGCCAAGGCCAACGACGAATATCACATCGACTCGATCCT
CGCTCTGGCTGCGAACCGCCAGCACCGCAACCTCCTGGCCTCTGGATCTG
CCGACCGCACCGTCAAGCTCTGGGATCTCCAGACCACCAAGTGCGCCAAG
TCGTACTCCCACCACACCGACAAGGTGTGCGCGCTGGAGTGGCACCCGAC
CGAATCGACCGTCCTGCTGAGCGGTAGCTACGACCGCACGGTGGTGGCAG
CGGACATGAGAGCCCCCGACTCCAAGGCGCGCTGGGGCGTGGATGCGGAT
GTCGAGAACGTGCGCTGGGACGTGCACGACCCGAACTACTTCTACGTGAC
GACGGACGCCGGTATGGTGTACCGCTACGATGTGCGGAACATTCCCGCCT
CGCCCAAGGAGTCCAAGCCCGTGTGGACGCTGCAGGCGCACGACTCGTCG
GTGTCGTCGTTCGACGTCAACCCCACCGTGCCGGGCTACCTGGTGACCGG
GTCAACGGACAAGTCCGTTAAGCTCTGGAACATTGAGAACGACAAGCCCA
GCATGGTGGTGTCTCGCAAGATGGAAGTGGGCAAGATCTTCTCGACCACT
TTCGCGCCGGATGCTGATGTGAGCTTCCGCCTGGCTGTGGCGGGCAGCAA
GGGCGTGGTCCAGATCTGGGATACCTCCACTAACGCGGCGGTGCGTCGGG
CGTTCGTCTCGCGGGTGCCTACCCTGGAGGGCGAGGTGCAGGAACGTCTG
GTCGGTATTCAGCCCGACCAGGATGAGTCGGATGAGGAGGAAGGCGTGCA
GGAGGTTGGAGCGGCGCAAGGTGCGGATGGCTGGGAATCGATGGATGAGG
ATTGA
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Coding sequence (CDS) from alignment at MCQH01000073:28556..30260+

>ATCC10864_004224-T1 ID=ATCC10864_004224-T1|Name=ATCC10864_004224-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3246bp|location=Sequence derived from alignment at MCQH01000073:28556..30260+ (Aspergillus niger ATCC 10864)
ATGTCTATGATTACCACTTCCGCTTGGGTGCGGCGCGGAGTCGCTGCTCA
GTTCCCTACGAAATATGAGATCAATGAGGAGGAAATGGATCGCATATCGA
AGCTTGCGCGTATGCAGCTTGAAGAGGCGCAGGGTGATTTGAAGGCTGCG
CAGGAGGATGAGGAGATGGAGGAGGATAAGAAGGAGGGTGCGGATGATGC
TATGGAGGATGATTCCAAGGAAGAGGAGGAGGAGGAGAAGAAGAAGAAGG
AGGGTGCTGCAGATGACGACGACGACCTGAAGGAATACGATCTGGATCAC
TACGATAGCGACGAGGTCGACGAGGACGGCGAGAAGATCACCATGTTCGG
CAATGTCAAGTCGCTCGCTTATCACCAGCCCAACGAGGAGGACCCGTACC
TGGTTATGCCGCCGGAGGAGGAAGACGAGGAGAGAGAGGAACTGCAGATT
ATGCCGACGGATAACCTGCTGTTGGCGGGTAAGGTTGAGGACGAGGTTGC
TCATCTGGAAGTCTACGTCTACGAGGATGCCGCCGACAACCTTTACGTGC
ACCACGATATCATGCTGCCCGCTATTCCGTTGGCGCTAGAGTGGTTGGAC
ATCCCCGTTGGCAAGACGGCCGAGGGCCGCACTACCGGTAACTTCGTGGC
TATCGGAACAATGGAACCCGACATTGAGATCTGGGACCTCGATGTCGTCG
ACAGCATGTACCCCAACGCGATCCTGGGCCAGGGTGGTGCCGATGCCGAG
AACGGCGCGAAGAAGTCCAAGAAGAAGAAGGCCAAGGCCAACGACGAATA
TCACATCGACTCGATCCTCGCTCTGGCTGCGAACCGCCAGCACCGCAACC
TCCTGGCCTCTGGATCTGCCGACCGCACCGTCAAGCTCTGGGATCTCCAG
ACCACCAAGTGCGCCAAGTCGTACTCCCACCACACCGACAAGGTGTGCGC
GCTGGAGTGGCACCCGACCGAATCGACCGTCCTGCTGAGCGGTAGCTACG
ACCGCACGGTGGTGGCAGCGGACATGAGAGCCCCCGACTCCAAGGCGCGC
TGGGGCGTGGATGCGGATGTCGAGAACGTGCGCTGGGACGTGCACGACCC
GAACTACTTCTACGTGACGACGGACGCCGGTATGGTGTACCGCTACGATG
TGCGGAACATTCCCGCCTCGCCCAAGGAGTCCAAGCCCGTGTGGACGCTG
CAGGCGCACGACTCGTCGGTGTCGTCGTTCGACGTCAACCCCACCGTGCC
GGGCTACCTGGTGACCGGGTCAACGGACAAGTCCGTTAAGCTCTGGAACA
TTGAGAACGACAAGCCCAGCATGGTGGTGTCTCGCAAGATGGAAGTGGGC
AAGATCTTCTCGACCACTTTCGCGCCGGATGCTGATGTGAGCTTCCGCCT
GGCTGTGGCGGGCAGCAAGGGCGTGGTCCAGATCTGGGATACCTCCACTA
ACGCGGCGGTGCGTCGGGCGTTCGTCTCGCGGGTGCCTACCCTGGAGGGC
GAGGTGCAGGAACGTCTGGTCGGTATTCAGCCCGACCAGGATGAGTCGGA
TGAGGAGGAAGGCGTGCAGGAGGTTGGAGCGGCGCAAGGTGCGGATGGCT
GGGAATCGATGGATGAGGATTGAATGTCTATGATTACCACTTCCGCTTGG
GTGCGGCGCGGAGTCGCTGCTCAGTTCCCTACGAAATATGAGATCAATGA
GGAGGAAATGGATCGCATATCGAAGCTTGCGCGTATGCAGCTTGAAGAGG
CGCAGGGTGATTTGAAGGCTGCGCAGGAGGATGAGGAGATGGAGGAGGAT
AAGAAGGAGGGTGCGGATGATGCTATGGAGGATGATTCCAAGGAAGAGGA
GGAGGAGGAGAAGAAGAAGAAGGAGGGTGCTGCAGATGACGACGACGACC
TGAAGGAATACGATCTGGATCACTACGATAGCGACGAGGTCGACGAGGAC
GGCGAGAAGATCACCATGTTCGGCAATGTCAAGTCGCTCGCTTATCACCA
GCCCAACGAGGAGGACCCGTACCTGGTTATGCCGCCGGAGGAGGAAGACG
AGGAGAGAGAGGAACTGCAGATTATGCCGACGGATAACCTGCTGTTGGCG
GGTAAGGTTGAGGACGAGGTTGCTCATCTGGAAGTCTACGTCTACGAGGA
TGCCGCCGACAACCTTTACGTGCACCACGATATCATGCTGCCCGCTATTC
CGTTGGCGCTAGAGTGGTTGGACATCCCCGTTGGCAAGACGGCCGAGGGC
CGCACTACCGGTAACTTCGTGGCTATCGGAACAATGGAACCCGACATTGA
GATCTGGGACCTCGATGTCGTCGACAGCATGTACCCCAACGCGATCCTGG
GCCAGGGTGGTGCCGATGCCGAGAACGGCGCGAAGAAGTCCAAGAAGAAG
AAGGCCAAGGCCAACGACGAATATCACATCGACTCGATCCTCGCTCTGGC
TGCGAACCGCCAGCACCGCAACCTCCTGGCCTCTGGATCTGCCGACCGCA
CCGTCAAGCTCTGGGATCTCCAGACCACCAAGTGCGCCAAGTCGTACTCC
CACCACACCGACAAGGTGTGCGCGCTGGAGTGGCACCCGACCGAATCGAC
CGTCCTGCTGAGCGGTAGCTACGACCGCACGGTGGTGGCAGCGGACATGA
GAGCCCCCGACTCCAAGGCGCGCTGGGGCGTGGATGCGGATGTCGAGAAC
GTGCGCTGGGACGTGCACGACCCGAACTACTTCTACGTGACGACGGACGC
CGGTATGGTGTACCGCTACGATGTGCGGAACATTCCCGCCTCGCCCAAGG
AGTCCAAGCCCGTGTGGACGCTGCAGGCGCACGACTCGTCGGTGTCGTCG
TTCGACGTCAACCCCACCGTGCCGGGCTACCTGGTGACCGGGTCAACGGA
CAAGTCCGTTAAGCTCTGGAACATTGAGAACGACAAGCCCAGCATGGTGG
TGTCTCGCAAGATGGAAGTGGGCAAGATCTTCTCGACCACTTTCGCGCCG
GATGCTGATGTGAGCTTCCGCCTGGCTGTGGCGGGCAGCAAGGGCGTGGT
CCAGATCTGGGATACCTCCACTAACGCGGCGGTGCGTCGGGCGTTCGTCT
CGCGGGTGCCTACCCTGGAGGGCGAGGTGCAGGAACGTCTGGTCGGTATT
CAGCCCGACCAGGATGAGTCGGATGAGGAGGAAGGCGTGCAGGAGGTTGG
AGCGGCGCAAGGTGCGGATGGCTGGGAATCGATGGATGAGGATTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004224ATCC10864_004224Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004224-T1.exon1ATCC10864_004224-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_004224-T1.exon2ATCC10864_004224-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004224-T1.cdsATCC10864_004224-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004224-T1ATCC10864_004224-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR015943
InterProIPR017986
InterProIPR019775
InterProIPR001680
InterProIPR036322
InterProIPR044285
InterProIPR020472
PFAMPF00400
Properties
Property NameValue
NoteBUSCO:EOG09261DW8
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000073supercontigMCQH01000073:28556..30260 +
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