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ATCC10864_004240-T1, ATCC10864_004240-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004240-T1
Unique NameATCC10864_004240-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000073:85784..87312-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004240-T1 ID=ATCC10864_004240-T1|Name=ATCC10864_004240-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1529bp|location=Sequence derived from alignment at MCQH01000073:85784..87312- (Aspergillus niger ATCC 10864)
ATGGCTGCTGTAAGTTCCAATTCCGATGAAATGCGTGGTGTTCATCACCG
CTGACTCTCCCCGACAGCCAATTTCTACCGTCGCGGAGACCAAGGAGCTC
CGGGGTCTCAACCTCATCGCTGCTCATTCACACATTCGAGGACTCGGTGT
CGATGCAGACAGCCTACAGCCTAGGGCTTCCTCTCAAGGGCTGGTGGGCC
AGGAGAAGGCGAGGAAGGCTGCCGCAGTGATTCTGCAAATGGTCAAGGAA
GGCAAGATTGCCGGTCGCGCGTTGCTGATTGCTGGCCCTCCTAGCACTGG
TAAAACAGCCATCGCCATGGGTATGGCGCAATCCCTCGGATCCGATGTTC
CCTTCACAATGCTCGCAGCGTCGGAGATCTTCTCCATGGAGATGTCCAAG
ACCGAGGCGCTCACGCAAGCCTTCCGCAAATCGATCGGCGTTCGTATCAA
GGAGGAGAGTGAAATCATCGAGGGTGAAGTGGTTGAAATCCAAATCGACC
GCAGTGTTACTGGTGTAAGTGAGGCCTTGGGTGAGCTCTCATTGACGAAC
GCTTCTGACATCAGTTATCTTTTAGGGAAACAAACAAGGCAAGCTCACCA
TCAAGACGACCGACATGGAAACGATCTACGACATGGGAACAAAGATGATC
GACTCAATGACCAAGGAACGAGTGATGGCCGGTGACATTATCTCCATTGA
CAAATCCTCGGGCAAGATAACCAAGCTGGGACGTTCTTACGCTCGGTCGC
GCGACTATGATGCGATGGGAGCGGACACAAAGTTTGTCCAATGCCCTGAG
GGTGAACTCCAGGTTCGCAAGGAAATCGTGCACACCGTCAGCCTTCATGA
GATCGATGTGATCAACTCGCGGTCACAAGGATTCTTGGCTCTCTTCTCTG
GAGATACCGGTGAGATCAGGAGTGAAGTGAGGGATCAGATTAACACCAAG
GTGGCGGAGTGGAAGGAAGAAGGAAAAGCCGAGATTATCCCGGGAGTCCT
TTTCATTGATGAAGTGCACATGCTTGACATTGAATGCTTCTCTTACATCA
ACCGCGCTCTGGAGGCGGAACTGGCACCCATCGTCATCATGGCTAGCAAC
CGGGGCCACGCCCGGATTCGTGGTACGACATACAGCTCTCCGCACGGCCT
TCCCCTGGATTTCCTCGACCGCGTGGTGATTGTCAGCACACAGCCCTACT
CTGCCGATGAGATTAGGCAGATTCTGGCGATTCGCGCCCAGGAGGAAGAG
ATCGACCTTTCTCCGGACGCTTTGGCGCTGCTCACCAAGATCGGCCAGGA
GTCGAATCTACGCTACGCCAGCAACATCATCACCACCTCCCATTTGCTCA
GCCAAAAGCGTAAGGCGAAGGAGGTCAGCATTGATGACGTCCAGCGCAGT
TACCGGCTGTTCTACGACCCTGCACGGAGCGTCAAATTCGTCAGCACATA
CGAACAGCGTTTCATCGGCGATCAAGGTGCCGTTAGCTTCATTGCTCCTA
CAAACGGAGATGCGATGGAGCTTTCATAG
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Coding sequence (CDS) from alignment at MCQH01000073:85784..87312-

>ATCC10864_004240-T1 ID=ATCC10864_004240-T1|Name=ATCC10864_004240-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4230bp|location=Sequence derived from alignment at MCQH01000073:85784..87312- (Aspergillus niger ATCC 10864)
GGAAACAAACAAGGCAAGCTCACCATCAAGACGACCGACATGGAAACGAT
CTACGACATGGGAACAAAGATGATCGACTCAATGACCAAGGAACGAGTGA
TGGCCGGTGACATTATCTCCATTGACAAATCCTCGGGCAAGATAACCAAG
CTGGGACGTTCTTACGCTCGGTCGCGCGACTATGATGCGATGGGAGCGGA
CACAAAGTTTGTCCAATGCCCTGAGGGTGAACTCCAGGTTCGCAAGGAAA
TCGTGCACACCGTCAGCCTTCATGAGATCGATGTGATCAACTCGCGGTCA
CAAGGATTCTTGGCTCTCTTCTCTGGAGATACCGGTGAGATCAGGAGTGA
AGTGAGGGATCAGATTAACACCAAGGTGGCGGAGTGGAAGGAAGAAGGAA
AAGCCGAGATTATCCCGGGAGTCCTTTTCATTGATGAAGTGCACATGCTT
GACATTGAATGCTTCTCTTACATCAACCGCGCTCTGGAGGCGGAACTGGC
ACCCATCGTCATCATGGCTAGCAACCGGGGCCACGCCCGGATTCGTGGTA
CGACATACAGCTCTCCGCACGGCCTTCCCCTGGATTTCCTCGACCGCGTG
GTGATTGTCAGCACACAGCCCTACTCTGCCGATGAGATTAGGCAGATTCT
GGCGATTCGCGCCCAGGAGGAAGAGATCGACCTTTCTCCGGACGCTTTGG
CGCTGCTCACCAAGATCGGCCAGGAGTCGAATCTACGCTACGCCAGCAAC
ATCATCACCACCTCCCATTTGCTCAGCCAAAAGCGTAAGGCGAAGGAGGT
CAGCATTGATGACGTCCAGCGCAGTTACCGGCTGTTCTACGACCCTGCAC
GGAGCGTCAAATTCGTCAGCACATACGAACAGCGTTTCATCGGCGATCAA
GGTGCCGTTAGCTTCATTGCTCCTACAAACGGAGATGCGATGGAGCTTTC
ATAGCCAATTTCTACCGTCGCGGAGACCAAGGAGCTCCGGGGTCTCAACC
TCATCGCTGCTCATTCACACATTCGAGGACTCGGTGTCGATGCAGACAGC
CTACAGCCTAGGGCTTCCTCTCAAGGGCTGGTGGGCCAGGAGAAGGCGAG
GAAGGCTGCCGCAGTGATTCTGCAAATGGTCAAGGAAGGCAAGATTGCCG
GTCGCGCGTTGCTGATTGCTGGCCCTCCTAGCACTGGTAAAACAGCCATC
GCCATGGGTATGGCGCAATCCCTCGGATCCGATGTTCCCTTCACAATGCT
CGCAGCGTCGGAGATCTTCTCCATGGAGATGTCCAAGACCGAGGCGCTCA
CGCAAGCCTTCCGCAAATCGATCGGCGTTCGTATCAAGGAGGAGAGTGAA
ATCATCGAGGGTGAAGTGGTTGAAATCCAAATCGACCGCAGTGTTACTGG
TATGGCTGCTGGAAACAAACAAGGCAAGCTCACCATCAAGACGACCGACA
TGGAAACGATCTACGACATGGGAACAAAGATGATCGACTCAATGACCAAG
GAACGAGTGATGGCCGGTGACATTATCTCCATTGACAAATCCTCGGGCAA
GATAACCAAGCTGGGACGTTCTTACGCTCGGTCGCGCGACTATGATGCGA
TGGGAGCGGACACAAAGTTTGTCCAATGCCCTGAGGGTGAACTCCAGGTT
CGCAAGGAAATCGTGCACACCGTCAGCCTTCATGAGATCGATGTGATCAA
CTCGCGGTCACAAGGATTCTTGGCTCTCTTCTCTGGAGATACCGGTGAGA
TCAGGAGTGAAGTGAGGGATCAGATTAACACCAAGGTGGCGGAGTGGAAG
GAAGAAGGAAAAGCCGAGATTATCCCGGGAGTCCTTTTCATTGATGAAGT
GCACATGCTTGACATTGAATGCTTCTCTTACATCAACCGCGCTCTGGAGG
CGGAACTGGCACCCATCGTCATCATGGCTAGCAACCGGGGCCACGCCCGG
ATTCGTGGTACGACATACAGCTCTCCGCACGGCCTTCCCCTGGATTTCCT
CGACCGCGTGGTGATTGTCAGCACACAGCCCTACTCTGCCGATGAGATTA
GGCAGATTCTGGCGATTCGCGCCCAGGAGGAAGAGATCGACCTTTCTCCG
GACGCTTTGGCGCTGCTCACCAAGATCGGCCAGGAGTCGAATCTACGCTA
CGCCAGCAACATCATCACCACCTCCCATTTGCTCAGCCAAAAGCGTAAGG
CGAAGGAGGTCAGCATTGATGACGTCCAGCGCAGTTACCGGCTGTTCTAC
GACCCTGCACGGAGCGTCAAATTCGTCAGCACATACGAACAGCGTTTCAT
CGGCGATCAAGGTGCCGTTAGCTTCATTGCTCCTACAAACGGAGATGCGA
TGGAGCTTTCATAGCCAATTTCTACCGTCGCGGAGACCAAGGAGCTCCGG
GGTCTCAACCTCATCGCTGCTCATTCACACATTCGAGGACTCGGTGTCGA
TGCAGACAGCCTACAGCCTAGGGCTTCCTCTCAAGGGCTGGTGGGCCAGG
AGAAGGCGAGGAAGGCTGCCGCAGTGATTCTGCAAATGGTCAAGGAAGGC
AAGATTGCCGGTCGCGCGTTGCTGATTGCTGGCCCTCCTAGCACTGGTAA
AACAGCCATCGCCATGGGTATGGCGCAATCCCTCGGATCCGATGTTCCCT
TCACAATGCTCGCAGCGTCGGAGATCTTCTCCATGGAGATGTCCAAGACC
GAGGCGCTCACGCAAGCCTTCCGCAAATCGATCGGCGTTCGTATCAAGGA
GGAGAGTGAAATCATCGAGGGTGAAGTGGTTGAAATCCAAATCGACCGCA
GTGTTACTGGTATGGCTGCTGGAAACAAACAAGGCAAGCTCACCATCAAG
ACGACCGACATGGAAACGATCTACGACATGGGAACAAAGATGATCGACTC
AATGACCAAGGAACGAGTGATGGCCGGTGACATTATCTCCATTGACAAAT
CCTCGGGCAAGATAACCAAGCTGGGACGTTCTTACGCTCGGTCGCGCGAC
TATGATGCGATGGGAGCGGACACAAAGTTTGTCCAATGCCCTGAGGGTGA
ACTCCAGGTTCGCAAGGAAATCGTGCACACCGTCAGCCTTCATGAGATCG
ATGTGATCAACTCGCGGTCACAAGGATTCTTGGCTCTCTTCTCTGGAGAT
ACCGGTGAGATCAGGAGTGAAGTGAGGGATCAGATTAACACCAAGGTGGC
GGAGTGGAAGGAAGAAGGAAAAGCCGAGATTATCCCGGGAGTCCTTTTCA
TTGATGAAGTGCACATGCTTGACATTGAATGCTTCTCTTACATCAACCGC
GCTCTGGAGGCGGAACTGGCACCCATCGTCATCATGGCTAGCAACCGGGG
CCACGCCCGGATTCGTGGTACGACATACAGCTCTCCGCACGGCCTTCCCC
TGGATTTCCTCGACCGCGTGGTGATTGTCAGCACACAGCCCTACTCTGCC
GATGAGATTAGGCAGATTCTGGCGATTCGCGCCCAGGAGGAAGAGATCGA
CCTTTCTCCGGACGCTTTGGCGCTGCTCACCAAGATCGGCCAGGAGTCGA
ATCTACGCTACGCCAGCAACATCATCACCACCTCCCATTTGCTCAGCCAA
AAGCGTAAGGCGAAGGAGGTCAGCATTGATGACGTCCAGCGCAGTTACCG
GCTGTTCTACGACCCTGCACGGAGCGTCAAATTCGTCAGCACATACGAAC
AGCGTTTCATCGGCGATCAAGGTGCCGTTAGCTTCATTGCTCCTACAAAC
GGAGATGCGATGGAGCTTTCATAGCCAATTTCTACCGTCGCGGAGACCAA
GGAGCTCCGGGGTCTCAACCTCATCGCTGCTCATTCACACATTCGAGGAC
TCGGTGTCGATGCAGACAGCCTACAGCCTAGGGCTTCCTCTCAAGGGCTG
GTGGGCCAGGAGAAGGCGAGGAAGGCTGCCGCAGTGATTCTGCAAATGGT
CAAGGAAGGCAAGATTGCCGGTCGCGCGTTGCTGATTGCTGGCCCTCCTA
GCACTGGTAAAACAGCCATCGCCATGGGTATGGCGCAATCCCTCGGATCC
GATGTTCCCTTCACAATGCTCGCAGCGTCGGAGATCTTCTCCATGGAGAT
GTCCAAGACCGAGGCGCTCACGCAAGCCTTCCGCAAATCGATCGGCGTTC
GTATCAAGGAGGAGAGTGAAATCATCGAGGGTGAAGTGGTTGAAATCCAA
ATCGACCGCAGTGTTACTGGTATGGCTGCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0035267NuA4 histone acetyltransferase complex
GO:0031011Ino80 complex
GO:0097255R2TP complex
Vocabulary: Molecular Function
TermDefinition
GO:00431395'-3' DNA helicase activity
GO:0005524ATP binding
GO:0003678DNA helicase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RVB2ATCC10864_004240Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004240-T1ATCC10864_004240-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004240-T1.cdsATCC10864_004240-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004240-T1.exon3ATCC10864_004240-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_004240-T1.exon2ATCC10864_004240-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004240-T1.exon1ATCC10864_004240-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF17856
PFAMPF03796
InterProIPR042487
InterProIPR010339
InterProIPR041048
InterProIPR003593
InterProIPR027417
InterProIPR037942
PFAMPF06068
InterProIPR027238
Properties
Property NameValue
ProductRuvB-like protein 2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000073supercontigMCQH01000073:85784..87312 -
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