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ATCC10864_004372-T1, ATCC10864_004372-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004372-T1
Unique NameATCC10864_004372-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000073:451674..452350+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004372-T1 ID=ATCC10864_004372-T1|Name=ATCC10864_004372-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=677bp|location=Sequence derived from alignment at MCQH01000073:451674..452350+ (Aspergillus niger ATCC 10864)
ATGGCAGCTAAAGTGCCCAGAAACTTCAGACTGCTCGAAGAGCTGGAGAA
GGGTGAGAAGGGTCTGGGAGCTGGTAAGTGCTATTCTACTTATAGTCATA
GGAGACTCATTTCGCTGACGTATTCCTATCGCTGCAACTTAGAGTCATGC
TCCTATGGTCTTGCAGATGGTGAAGACATGATGATGAGTAACTGGAACGG
AACTATTCTCGGCCCCCCTCACGTTCGTCCCACGCCTCCGACTCGCATCC
GTTATACTATACAATAGCATCACTGACATAATGAACGAGCGCAGAGTGTC
CATGAGAACAGAATTTACAGCGTCAACATCCATTGCGGTCCGGACTATCC
CGACAACCCCCCTACCATCCAATTCGTATCCCGAGTCAACTTGCCATGCG
TTGATGGCCGGAGCGGAAAGGTAAGGATTCGTCCTATCCCGACCGCTACT
ATATGAAAGATTCCAAGTTGACTTCAAGCTAGGTCGATCCTACCAAGCTG
CCCTGCTTGGCTCAGTGGAAGCGCGACTATACCATGGAAACTATTCTAGT
CGAGCTCAGAAGGTAATTATGTCCTGGCCTTCAGGCCATCGGTGACTTGA
TACTAATAGTTCCTAGATATATGGCTCTGCCTCAGCACAAGAAGCTTCCC
CAGCCTCCGGAAGGCTCGAACTTCTAA
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Coding sequence (CDS) from alignment at MCQH01000073:451674..452350+

>ATCC10864_004372-T1 ID=ATCC10864_004372-T1|Name=ATCC10864_004372-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2100bp|location=Sequence derived from alignment at MCQH01000073:451674..452350+ (Aspergillus niger ATCC 10864)
ATGGCAGCTAAAGTGCCCAGAAACTTCAGACTGCTCGAAGAGCTGGAGAA
GGGTGAGAAGGGTCTGGGAGCTGAGTCATGCTCCTATGGTCTTGCAGATG
GTGAAGACATGATGATGAGTAACTGGAACGGAACTATTCTCGGCCCCCCT
CACAGTGTCCATGAGAACAGAATTTACAGCGTCAACATCCATTGCGGTCC
GGACTATCCCGACAACCCCCCTACCATCCAATTCGTATCCCGAGTCAACT
TGCCATGCGTTGATGGCCGGAGCGGAAAGGTCGATCCTACCAAGCTGCCC
TGCTTGGCTCAGTGGAAGCGCGACTATACCATGGAAACTATTCTAGTCGA
GCTCAGAAGATATATGGCTCTGCCTCAGCACAAGAAGCTTCCCCAGCCTC
CGGAAGGCTCGAACTTCTAAATGGCAGCTAAAGTGCCCAGAAACTTCAGA
CTGCTCGAAGAGCTGGAGAAGGGTGAGAAGGGTCTGGGAGCTGAGTCATG
CTCCTATGGTCTTGCAGATGGTGAAGACATGATGATGAGTAACTGGAACG
GAACTATTCTCGGCCCCCCTCACAGTGTCCATGAGAACAGAATTTACAGC
GTCAACATCCATTGCGGTCCGGACTATCCCGACAACCCCCCTACCATCCA
ATTCGTATCCCGAGTCAACTTGCCATGCGTTGATGGCCGGAGCGGAAAGG
TCGATCCTACCAAGCTGCCCTGCTTGGCTCAGTGGAAGCGCGACTATACC
ATGGAAACTATTCTAGTCGAGCTCAGAAGATATATGGCTCTGCCTCAGCA
CAAGAAGCTTCCCCAGCCTCCGGAAGGCTCGAACTTCTAAATGGCAGCTA
AAGTGCCCAGAAACTTCAGACTGCTCGAAGAGCTGGAGAAGGGTGAGAAG
GGTCTGGGAGCTGAGTCATGCTCCTATGGTCTTGCAGATGGTGAAGACAT
GATGATGAGTAACTGGAACGGAACTATTCTCGGCCCCCCTCACAGTGTCC
ATGAGAACAGAATTTACAGCGTCAACATCCATTGCGGTCCGGACTATCCC
GACAACCCCCCTACCATCCAATTCGTATCCCGAGTCAACTTGCCATGCGT
TGATGGCCGGAGCGGAAAGGTCGATCCTACCAAGCTGCCCTGCTTGGCTC
AGTGGAAGCGCGACTATACCATGGAAACTATTCTAGTCGAGCTCAGAAGA
TATATGGCTCTGCCTCAGCACAAGAAGCTTCCCCAGCCTCCGGAAGGCTC
GAACTTCTAAATGGCAGCTAAAGTGCCCAGAAACTTCAGACTGCTCGAAG
AGCTGGAGAAGGGTGAGAAGGGTCTGGGAGCTGAGTCATGCTCCTATGGT
CTTGCAGATGGTGAAGACATGATGATGAGTAACTGGAACGGAACTATTCT
CGGCCCCCCTCACAGTGTCCATGAGAACAGAATTTACAGCGTCAACATCC
ATTGCGGTCCGGACTATCCCGACAACCCCCCTACCATCCAATTCGTATCC
CGAGTCAACTTGCCATGCGTTGATGGCCGGAGCGGAAAGGTCGATCCTAC
CAAGCTGCCCTGCTTGGCTCAGTGGAAGCGCGACTATACCATGGAAACTA
TTCTAGTCGAGCTCAGAAGATATATGGCTCTGCCTCAGCACAAGAAGCTT
CCCCAGCCTCCGGAAGGCTCGAACTTCTAAATGGCAGCTAAAGTGCCCAG
AAACTTCAGACTGCTCGAAGAGCTGGAGAAGGGTGAGAAGGGTCTGGGAG
CTGAGTCATGCTCCTATGGTCTTGCAGATGGTGAAGACATGATGATGAGT
AACTGGAACGGAACTATTCTCGGCCCCCCTCACAGTGTCCATGAGAACAG
AATTTACAGCGTCAACATCCATTGCGGTCCGGACTATCCCGACAACCCCC
CTACCATCCAATTCGTATCCCGAGTCAACTTGCCATGCGTTGATGGCCGG
AGCGGAAAGGTCGATCCTACCAAGCTGCCCTGCTTGGCTCAGTGGAAGCG
CGACTATACCATGGAAACTATTCTAGTCGAGCTCAGAAGATATATGGCTC
TGCCTCAGCACAAGAAGCTTCCCCAGCCTCCGGAAGGCTCGAACTTCTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SPM2ATCC10864_004372Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004372-T1ATCC10864_004372-T1-proteinAspergillus niger ATCC 10864polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004372-T1.exon1ATCC10864_004372-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_004372-T1.exon2ATCC10864_004372-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004372-T1.exon3ATCC10864_004372-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_004372-T1.exon4ATCC10864_004372-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_004372-T1.exon5ATCC10864_004372-T1.exon5Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004372-T1.cdsATCC10864_004372-T1.cdsAspergillus niger ATCC 10864CDS


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR000608
PFAMPF00179
InterProIPR016135
Properties
Property NameValue
NoteBUSCO:EOG09264UD3
ProductUbiquitin-conjugating enzyme spm2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000073supercontigMCQH01000073:451674..452350 +
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