You are here

Home

ATCC10864_004379-T1, ATCC10864_004379-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004379-T1
Unique NameATCC10864_004379-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000073:463777..465466-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004379-T1 ID=ATCC10864_004379-T1|Name=ATCC10864_004379-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1690bp|location=Sequence derived from alignment at MCQH01000073:463777..465466- (Aspergillus niger ATCC 10864)
ATGCCACCTGTAAGTCTCCTTGGCCTCTCACTACGCGTTGTGCAATCCTC
GGTCGCGAGCCTGATGGGCTTGGAGATCCAGTTTGCACGCGTATATCTCT
AACTGTTCAACAGGCTCGGAGTCTTCGTACGAGAGGCACGATGAACGAGA
ACGACGAGAATGGCCCATCGACGCGTCTGACGCGGGCCAAGGCCGCTGCC
CTGTCAGTCAATGACGCTGGGGCTCCCCCCGCCAAGAAGCCGCTCCAGAC
GAAGAAGGCTGCGACCGCTACTACCACCACCGGAACCCGTAGACGCGCCG
CCCTTGGTGATGTGAGCAATGTTACCAAAGCAGAGAATGGAGAGACCAAG
GAGGCCAAGAAGCCAGCTGCTACGAAGGTTGGCCTGACGTCGAAAGCAAC
ATTGCAGGCTGGTGGAGTTCAGAAACTTACTCGCAACAACTCGTCACGCG
CTGCCCTGGGACCCAAGGACAGCAACCCCAAGAAGCCTACCACAGAAACA
AAGCGCCCCGGAAGTGGATCGGGCACCAAGCGGACATCCAGCGAAAAGGC
CATCCAAGAGAAGGCAGCTGAGGAGGAACCACGCCCCCGAAAGAAGGTCG
AAGTCGAGAAGAAGGTCACCGAACAGAAGACTGTCGCCGAAAAGATCACC
AACGCGAAGGAGGATGTCAACGTTCCGGTCGATCCGAAGGTTTTGCAAAA
GCCTGTCGATGATTTTGTCGACGACCTTGACGCCGAAGATCTTGACGATC
CTTTGATGGTTGCTGAATACGTCGTCGATATCTTCGAATACCTCAAGGAC
CTTGAGCTAGAGACCTTGCCCAACGCCGAGTACATCGAACACCAACCTGA
TCTGGAGTGGAAGATGCGCGGCATCCTTGTCGACTGGCTCATCGAGGTCC
ATACCCGCTTCCGCCTCCTCCCCGAGACCCTTTTCCTTGCTGTCAACATC
ATTGACCGCTTCCTCTCTGCTGAGGTGGTGGCTCTGGACCGTCTTCAATT
GGTTGGTGTCGCCGCTATGTTCATCGCCTCCAAATATGAGGAAGTCCTTT
CGCCACACGTTGCCAACTTCACCGACGTCGCAGACGGAACTTTCACAGAT
CGTGAGATCTTGGATGCTGAACGGCACATCCTCGCTACCCTGGAGTACAA
CATGAGCTACCCCAACCCCATGAACTTCCTCCGTCGAATTTCGAAAGCAG
ACAACTATGATATCCAAACCCGTACTCTTGGCAAGTACCTCATGGAAATC
AGCCTTCTGGACCACAGGTTCATGGGCTACCGCCAGAGTCATGTGGCCGC
TGCTGCCATGTATCTGGCTCGACTCATCCTTGACCGGGGTGTCTGGGTAT
GTTCCTTGCACACATATCTCGAGCATCTTGTGCTAATAGACGACTTAGGA
TGCCACCTTGGCTCATTATGCCGGTTATACTGAAGAAGAGATCGATCCGG
TCTTCCGCCTAATGATTGATTATCTCCACCGCCCTGTCTCTCATGAGGCG
TTCTTCAAGAAGTACGCCAGCAAGAAGTTCTTGAAGGGTATGTTGCCTCT
ATCTAGTATTGACACTGGACCACCAACCGCTAACCTGACTAGCATCCATC
CTTACCCGGCAATGGGCGAAGAAATACCACCACTTGTATATCAACAGCTC
ACTATCTGAGCCCTACTCTTATATGAAAGACCATGAATAA
back to top

Coding sequence (CDS) from alignment at MCQH01000073:463777..465466-

>ATCC10864_004379-T1 ID=ATCC10864_004379-T1|Name=ATCC10864_004379-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5916bp|location=Sequence derived from alignment at MCQH01000073:463777..465466- (Aspergillus niger ATCC 10864)
CATCCATCCTTACCCGGCAATGGGCGAAGAAATACCACCACTTGTATATC
AACAGCTCACTATCTGAGCCCTACTCTTATATGAAAGACCATGAATAAGA
TGCCACCTTGGCTCATTATGCCGGTTATACTGAAGAAGAGATCGATCCGG
TCTTCCGCCTAATGATTGATTATCTCCACCGCCCTGTCTCTCATGAGGCG
TTCTTCAAGAAGTACGCCAGCAAGAAGTTCTTGAAGGGCTCGGAGTCTTC
GTACGAGAGGCACGATGAACGAGAACGACGAGAATGGCCCATCGACGCGT
CTGACGCGGGCCAAGGCCGCTGCCCTGTCAGTCAATGACGCTGGGGCTCC
CCCCGCCAAGAAGCCGCTCCAGACGAAGAAGGCTGCGACCGCTACTACCA
CCACCGGAACCCGTAGACGCGCCGCCCTTGGTGATGTGAGCAATGTTACC
AAAGCAGAGAATGGAGAGACCAAGGAGGCCAAGAAGCCAGCTGCTACGAA
GGTTGGCCTGACGTCGAAAGCAACATTGCAGGCTGGTGGAGTTCAGAAAC
TTACTCGCAACAACTCGTCACGCGCTGCCCTGGGACCCAAGGACAGCAAC
CCCAAGAAGCCTACCACAGAAACAAAGCGCCCCGGAAGTGGATCGGGCAC
CAAGCGGACATCCAGCGAAAAGGCCATCCAAGAGAAGGCAGCTGAGGAGG
AACCACGCCCCCGAAAGAAGGTCGAAGTCGAGAAGAAGGTCACCGAACAG
AAGACTGTCGCCGAAAAGATCACCAACGCGAAGGAGGATGTCAACGTTCC
GGTCGATCCGAAGGTTTTGCAAAAGCCTGTCGATGATTTTGTCGACGACC
TTGACGCCGAAGATCTTGACGATCCTTTGATGGTTGCTGAATACGTCGTC
GATATCTTCGAATACCTCAAGGACCTTGAGCTAGAGACCTTGCCCAACGC
CGAGTACATCGAACACCAACCTGATCTGGAGTGGAAGATGCGCGGCATCC
TTGTCGACTGGCTCATCGAGGTCCATACCCGCTTCCGCCTCCTCCCCGAG
ACCCTTTTCCTTGCTGTCAACATCATTGACCGCTTCCTCTCTGCTGAGGT
GGTGGCTCTGGACCGTCTTCAATTGGTTGGTGTCGCCGCTATGTTCATCG
CCTCCAAATATGAGGAAGTCCTTTCGCCACACGTTGCCAACTTCACCGAC
GTCGCAGACGGAACTTTCACAGATCGTGAGATCTTGGATGCTGAACGGCA
CATCCTCGCTACCCTGGAGTACAACATGAGCTACCCCAACCCCATGAACT
TCCTCCGTCGAATTTCGAAAGCAGACAACTATGATATCCAAACCCGTACT
CTTGGCAAGTACCTCATGGAAATCAGCCTTCTGGACCACAGGTTCATGGG
CTACCGCCAGAGTCATGTGGCCGCTGCTGCCATGTATCTGGCTCGACTCA
TCCTTGACCGGGGTGTCTGGATGCCACCTCATCCATCCTTACCCGGCAAT
GGGCGAAGAAATACCACCACTTGTATATCAACAGCTCACTATCTGAGCCC
TACTCTTATATGAAAGACCATGAATAAGATGCCACCTTGGCTCATTATGC
CGGTTATACTGAAGAAGAGATCGATCCGGTCTTCCGCCTAATGATTGATT
ATCTCCACCGCCCTGTCTCTCATGAGGCGTTCTTCAAGAAGTACGCCAGC
AAGAAGTTCTTGAAGGGCTCGGAGTCTTCGTACGAGAGGCACGATGAACG
AGAACGACGAGAATGGCCCATCGACGCGTCTGACGCGGGCCAAGGCCGCT
GCCCTGTCAGTCAATGACGCTGGGGCTCCCCCCGCCAAGAAGCCGCTCCA
GACGAAGAAGGCTGCGACCGCTACTACCACCACCGGAACCCGTAGACGCG
CCGCCCTTGGTGATGTGAGCAATGTTACCAAAGCAGAGAATGGAGAGACC
AAGGAGGCCAAGAAGCCAGCTGCTACGAAGGTTGGCCTGACGTCGAAAGC
AACATTGCAGGCTGGTGGAGTTCAGAAACTTACTCGCAACAACTCGTCAC
GCGCTGCCCTGGGACCCAAGGACAGCAACCCCAAGAAGCCTACCACAGAA
ACAAAGCGCCCCGGAAGTGGATCGGGCACCAAGCGGACATCCAGCGAAAA
GGCCATCCAAGAGAAGGCAGCTGAGGAGGAACCACGCCCCCGAAAGAAGG
TCGAAGTCGAGAAGAAGGTCACCGAACAGAAGACTGTCGCCGAAAAGATC
ACCAACGCGAAGGAGGATGTCAACGTTCCGGTCGATCCGAAGGTTTTGCA
AAAGCCTGTCGATGATTTTGTCGACGACCTTGACGCCGAAGATCTTGACG
ATCCTTTGATGGTTGCTGAATACGTCGTCGATATCTTCGAATACCTCAAG
GACCTTGAGCTAGAGACCTTGCCCAACGCCGAGTACATCGAACACCAACC
TGATCTGGAGTGGAAGATGCGCGGCATCCTTGTCGACTGGCTCATCGAGG
TCCATACCCGCTTCCGCCTCCTCCCCGAGACCCTTTTCCTTGCTGTCAAC
ATCATTGACCGCTTCCTCTCTGCTGAGGTGGTGGCTCTGGACCGTCTTCA
ATTGGTTGGTGTCGCCGCTATGTTCATCGCCTCCAAATATGAGGAAGTCC
TTTCGCCACACGTTGCCAACTTCACCGACGTCGCAGACGGAACTTTCACA
GATCGTGAGATCTTGGATGCTGAACGGCACATCCTCGCTACCCTGGAGTA
CAACATGAGCTACCCCAACCCCATGAACTTCCTCCGTCGAATTTCGAAAG
CAGACAACTATGATATCCAAACCCGTACTCTTGGCAAGTACCTCATGGAA
ATCAGCCTTCTGGACCACAGGTTCATGGGCTACCGCCAGAGTCATGTGGC
CGCTGCTGCCATGTATCTGGCTCGACTCATCCTTGACCGGGGTGTCTGGA
TGCCACCTCATCCATCCTTACCCGGCAATGGGCGAAGAAATACCACCACT
TGTATATCAACAGCTCACTATCTGAGCCCTACTCTTATATGAAAGACCAT
GAATAAGATGCCACCTTGGCTCATTATGCCGGTTATACTGAAGAAGAGAT
CGATCCGGTCTTCCGCCTAATGATTGATTATCTCCACCGCCCTGTCTCTC
ATGAGGCGTTCTTCAAGAAGTACGCCAGCAAGAAGTTCTTGAAGGGCTCG
GAGTCTTCGTACGAGAGGCACGATGAACGAGAACGACGAGAATGGCCCAT
CGACGCGTCTGACGCGGGCCAAGGCCGCTGCCCTGTCAGTCAATGACGCT
GGGGCTCCCCCCGCCAAGAAGCCGCTCCAGACGAAGAAGGCTGCGACCGC
TACTACCACCACCGGAACCCGTAGACGCGCCGCCCTTGGTGATGTGAGCA
ATGTTACCAAAGCAGAGAATGGAGAGACCAAGGAGGCCAAGAAGCCAGCT
GCTACGAAGGTTGGCCTGACGTCGAAAGCAACATTGCAGGCTGGTGGAGT
TCAGAAACTTACTCGCAACAACTCGTCACGCGCTGCCCTGGGACCCAAGG
ACAGCAACCCCAAGAAGCCTACCACAGAAACAAAGCGCCCCGGAAGTGGA
TCGGGCACCAAGCGGACATCCAGCGAAAAGGCCATCCAAGAGAAGGCAGC
TGAGGAGGAACCACGCCCCCGAAAGAAGGTCGAAGTCGAGAAGAAGGTCA
CCGAACAGAAGACTGTCGCCGAAAAGATCACCAACGCGAAGGAGGATGTC
AACGTTCCGGTCGATCCGAAGGTTTTGCAAAAGCCTGTCGATGATTTTGT
CGACGACCTTGACGCCGAAGATCTTGACGATCCTTTGATGGTTGCTGAAT
ACGTCGTCGATATCTTCGAATACCTCAAGGACCTTGAGCTAGAGACCTTG
CCCAACGCCGAGTACATCGAACACCAACCTGATCTGGAGTGGAAGATGCG
CGGCATCCTTGTCGACTGGCTCATCGAGGTCCATACCCGCTTCCGCCTCC
TCCCCGAGACCCTTTTCCTTGCTGTCAACATCATTGACCGCTTCCTCTCT
GCTGAGGTGGTGGCTCTGGACCGTCTTCAATTGGTTGGTGTCGCCGCTAT
GTTCATCGCCTCCAAATATGAGGAAGTCCTTTCGCCACACGTTGCCAACT
TCACCGACGTCGCAGACGGAACTTTCACAGATCGTGAGATCTTGGATGCT
GAACGGCACATCCTCGCTACCCTGGAGTACAACATGAGCTACCCCAACCC
CATGAACTTCCTCCGTCGAATTTCGAAAGCAGACAACTATGATATCCAAA
CCCGTACTCTTGGCAAGTACCTCATGGAAATCAGCCTTCTGGACCACAGG
TTCATGGGCTACCGCCAGAGTCATGTGGCCGCTGCTGCCATGTATCTGGC
TCGACTCATCCTTGACCGGGGTGTCTGGATGCCACCTCATCCATCCTTAC
CCGGCAATGGGCGAAGAAATACCACCACTTGTATATCAACAGCTCACTAT
CTGAGCCCTACTCTTATATGAAAGACCATGAATAAGATGCCACCTTGGCT
CATTATGCCGGTTATACTGAAGAAGAGATCGATCCGGTCTTCCGCCTAAT
GATTGATTATCTCCACCGCCCTGTCTCTCATGAGGCGTTCTTCAAGAAGT
ACGCCAGCAAGAAGTTCTTGAAGGGCTCGGAGTCTTCGTACGAGAGGCAC
GATGAACGAGAACGACGAGAATGGCCCATCGACGCGTCTGACGCGGGCCA
AGGCCGCTGCCCTGTCAGTCAATGACGCTGGGGCTCCCCCCGCCAAGAAG
CCGCTCCAGACGAAGAAGGCTGCGACCGCTACTACCACCACCGGAACCCG
TAGACGCGCCGCCCTTGGTGATGTGAGCAATGTTACCAAAGCAGAGAATG
GAGAGACCAAGGAGGCCAAGAAGCCAGCTGCTACGAAGGTTGGCCTGACG
TCGAAAGCAACATTGCAGGCTGGTGGAGTTCAGAAACTTACTCGCAACAA
CTCGTCACGCGCTGCCCTGGGACCCAAGGACAGCAACCCCAAGAAGCCTA
CCACAGAAACAAAGCGCCCCGGAAGTGGATCGGGCACCAAGCGGACATCC
AGCGAAAAGGCCATCCAAGAGAAGGCAGCTGAGGAGGAACCACGCCCCCG
AAAGAAGGTCGAAGTCGAGAAGAAGGTCACCGAACAGAAGACTGTCGCCG
AAAAGATCACCAACGCGAAGGAGGATGTCAACGTTCCGGTCGATCCGAAG
GTTTTGCAAAAGCCTGTCGATGATTTTGTCGACGACCTTGACGCCGAAGA
TCTTGACGATCCTTTGATGGTTGCTGAATACGTCGTCGATATCTTCGAAT
ACCTCAAGGACCTTGAGCTAGAGACCTTGCCCAACGCCGAGTACATCGAA
CACCAACCTGATCTGGAGTGGAAGATGCGCGGCATCCTTGTCGACTGGCT
CATCGAGGTCCATACCCGCTTCCGCCTCCTCCCCGAGACCCTTTTCCTTG
CTGTCAACATCATTGACCGCTTCCTCTCTGCTGAGGTGGTGGCTCTGGAC
CGTCTTCAATTGGTTGGTGTCGCCGCTATGTTCATCGCCTCCAAATATGA
GGAAGTCCTTTCGCCACACGTTGCCAACTTCACCGACGTCGCAGACGGAA
CTTTCACAGATCGTGAGATCTTGGATGCTGAACGGCACATCCTCGCTACC
CTGGAGTACAACATGAGCTACCCCAACCCCATGAACTTCCTCCGTCGAAT
TTCGAAAGCAGACAACTATGATATCCAAACCCGTACTCTTGGCAAGTACC
TCATGGAAATCAGCCTTCTGGACCACAGGTTCATGGGCTACCGCCAGAGT
CATGTGGCCGCTGCTGCCATGTATCTGGCTCGACTCATCCTTGACCGGGG
TGTCTGGATGCCACCT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004379ATCC10864_004379Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004379-T1ATCC10864_004379-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004379-T1.cdsATCC10864_004379-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004379-T1.exon4ATCC10864_004379-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_004379-T1.exon3ATCC10864_004379-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_004379-T1.exon2ATCC10864_004379-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004379-T1.exon1ATCC10864_004379-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR013763
PFAMPF00134
InterProIPR036915
PFAMPF02984
InterProIPR039361
InterProIPR006671
InterProIPR004367
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000073supercontigMCQH01000073:463777..465466 -
Powered by Drupal