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ATCC10864_004539-T1, ATCC10864_004539-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004539-T1
Unique NameATCC10864_004539-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000074:270526..272187+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004539-T1 ID=ATCC10864_004539-T1|Name=ATCC10864_004539-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1662bp|location=Sequence derived from alignment at MCQH01000074:270526..272187+ (Aspergillus niger ATCC 10864)
ATGAGCATGGAAACCAAGACAGACCATGAGCGAACGGACACGATCGACCC
ACTTGCCCAACCCAACATCAAGACAGAGCTCGGAAATGGGCTCGAGAACA
TCGATCCTAATGCCCCAGTGCGGGTGCGCAGAGGATTTCTCCCGTGGTTG
TGTATGGTCCCATCTGTACAGGATCCCAGATCCTACAGCTCGGGAGTAAA
GTGGTTCTTAACCTTCATCGTTGCCGCTGGTGGTCTAGTCGTTCCGTTGA
GTAGCGGCGTCTTGTTCCGTAAGTATCCTCTCCCCATTACTTTCTTCAGA
CAGACTGGAGGTTTACGTGCTGGTCGTCCAACAGCCTGCTTGCTTGAAAT
TGCCGCCGACCTAGATACAACCGAATCCGTTGTCAACCTGTCTATTGCCT
TCGGTTCGCTGGCCGTCGCCATCACACCCCTGTGGTGGTCCTACTTCGCC
GAACTCTACGGTCGTCGTCTCGTCTATCTGTTATCTTTCTTCTTCGTCGG
TATTTTCTGTATCCTAGCAGCCATCAGCCCCAATATCGGTATGTTCATCG
CCATGCGCCTTCTTGGCAGCGCCTCAAGCGCTTCCCTACAATCCGTTAGC
GCAGGCACAATCTCCGACATGTTTGAGACGCACGAGCGCGGAAAGGCCAT
GGGCGCCTTCATGCTAGGACCCATGCTAGGCCCCATGTTTGCCCCTATCA
TCGGCGGAGCGCTCACGATGCGGTGGGGATGGCGCAGCACACAATGGTTC
ATGGTAATTTACGGCTGGACGGTGTTCATGGTGATGGTCTTCTTTTTACC
AGAGACAGCGACAAATCTGGCAGAGACTCAGCGCGAGCACCGCGCTAACG
CTAGCAGCCCTGTCAAGAAAGCCGCCCACTTTCTCCTCAAGCCCATAGAG
GCTGCCAAGCTCCTCCAGTACCCGCCTATCCTAATTACGGTCTACTATAC
AGCGATTGTGTTTGCGACTTATTACCTTATTTGCGTCTCAATCGAGGATA
CCTTCGCTGTGGCCCCCTACTACTGGAGTCCCGTGACCGTCGGGGTCGCC
TACATTCCCGGAGGGCTGGGGTTGTTGTTCGGGGCAATCATCGGTGGTCG
CTGGCAGGATGCAATCATGGCACGCACGGCGCGCAAGGAGGGCCGATATG
ACGATGCAGGAGAGCTGATACTGCATCCCGTAGACCGGTTGGGGGATAAT
TGCCTGATGGCGGGCATTCTCTTCCCTGGTGCGCTTTTGTGGTGGGGATG
GTCAGCCGAGAAGCAGATCTTCTGGCTGGTGCCGGTGAGTTCGCCATGTT
ATACCCTGATCGACATTTCCAGAATGGACAGAATGACTAATGCCCCTGAT
ACTACTTAGCTGATCGGAAATTTCTTCTATGGCTTCAGTGGAATGATTCT
CACCAACGTGACCATGACCATGCTGACCGAGTTCACCCCTAAGAAATCGA
CCGTTGGTGTGGCGGTGAACAACCTGTTGCGGAACAGCCTGTCGTGTGTC
AGTGCTGTCATCGCTCAACCGCTATTTGATGCCATTGGGACTGGATGGTC
GTTCACGGCTGCCTGTCTCTTCTGTCTGCTAAGTGGCATTCCGTTGATCC
TTCTGCGGATGAAGCGGGAGGAATGGAGCCGGAAGATGAAGGCTACGCTA
GGGAGTGAATAG
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Coding sequence (CDS) from alignment at MCQH01000074:270526..272187+

>ATCC10864_004539-T1 ID=ATCC10864_004539-T1|Name=ATCC10864_004539-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3174bp|location=Sequence derived from alignment at MCQH01000074:270526..272187+ (Aspergillus niger ATCC 10864)
ATGAGCATGGAAACCAAGACAGACCATGAGCGAACGGACACGATCGACCC
ACTTGCCCAACCCAACATCAAGACAGAGCTCGGAAATGGGCTCGAGAACA
TCGATCCTAATGCCCCAGTGCGGGTGCGCAGAGGATTTCTCCCGTGGTTG
TGTATGGTCCCATCTGTACAGGATCCCAGATCCTACAGCTCGGGAGTAAA
GTGGTTCTTAACCTTCATCGTTGCCGCTGGTGGTCTAGTCGTTCCGTTGA
GTAGCGGCGTCTTGTTCCGTAAGTATCCTCTCCCCATTACTTTCTTCAGA
CAGACTGGAGGTTTACGTGCTGGTCGTCCAACAGCCTGCTTGCTTGAAAT
TGCCGCCGACCTAGATACAACCGAATCCGTTGTCAACCTGTCTATTGCCT
TCGGTTCGCTGGCCGTCGCCATCACACCCCTGTGGTGGTCCTACTTCGCC
GAACTCTACGGTCGTCGTCTCGTCTATCTGTTATCTTTCTTCTTCGTCGG
TATTTTCTGTATCCTAGCAGCCATCAGCCCCAATATCGGTATGTTCATCG
CCATGCGCCTTCTTGGCAGCGCCTCAAGCGCTTCCCTACAATCCGTTAGC
GCAGGCACAATCTCCGACATGTTTGAGACGCACGAGCGCGGAAAGGCCAT
GGGCGCCTTCATGCTAGGACCCATGCTAGGCCCCATGTTTGCCCCTATCA
TCGGCGGAGCGCTCACGATGCGGTGGGGATGGCGCAGCACACAATGGTTC
ATGGTAATTTACGGCTGGACGGTGTTCATGGTGATGGTCTTCTTTTTACC
AGAGACAGCGACAAATCTGGCAGAGACTCAGCGCGAGCACCGCGCTAACG
CTAGCAGCCCTGTCAAGAAAGCCGCCCACTTTCTCCTCAAGCCCATAGAG
GCTGCCAAGCTCCTCCAGTACCCGCCTATCCTAATTACGGTCTACTATAC
AGCGATTGTGTTTGCGACTTATTACCTTATTTGCGTCTCAATCGAGGATA
CCTTCGCTGTGGCCCCCTACTACTGGAGTCCCGTGACCGTCGGGGTCGCC
TACATTCCCGGAGGGCTGGGGTTGTTGTTCGGGGCAATCATCGGTGGTCG
CTGGCAGGATGCAATCATGGCACGCACGGCGCGCAAGGAGGGCCGATATG
ACGATGCAGGAGAGCTGATACTGCATCCCGTAGACCGGTTGGGGGATAAT
TGCCTGATGGCGGGCATTCTCTTCCCTGGTGCGCTTTTGTGGTGGGGATG
GTCAGCCGAGAAGCAGATCTTCTGGCTGGTGCCGCTGATCGGAAATTTCT
TCTATGGCTTCAGTGGAATGATTCTCACCAACGTGACCATGACCATGCTG
ACCGAGTTCACCCCTAAGAAATCGACCGTTGGTGTGGCGGTGAACAACCT
GTTGCGGAACAGCCTGTCGTGTGTCAGTGCTGTCATCGCTCAACCGCTAT
TTGATGCCATTGGGACTGGATGGTCGTTCACGGCTGCCTGTCTCTTCTGT
CTGCTAAGTGGCATTCCGTTGATCCTTCTGCGGATGAAGCGGGAGGAATG
GAGCCGGAAGATGAAGGCTACGCTAGGGAGTGAATAGATGAGCATGGAAA
CCAAGACAGACCATGAGCGAACGGACACGATCGACCCACTTGCCCAACCC
AACATCAAGACAGAGCTCGGAAATGGGCTCGAGAACATCGATCCTAATGC
CCCAGTGCGGGTGCGCAGAGGATTTCTCCCGTGGTTGTGTATGGTCCCAT
CTGTACAGGATCCCAGATCCTACAGCTCGGGAGTAAAGTGGTTCTTAACC
TTCATCGTTGCCGCTGGTGGTCTAGTCGTTCCGTTGAGTAGCGGCGTCTT
GTTCCGTAAGTATCCTCTCCCCATTACTTTCTTCAGACAGACTGGAGGTT
TACGTGCTGGTCGTCCAACAGCCTGCTTGCTTGAAATTGCCGCCGACCTA
GATACAACCGAATCCGTTGTCAACCTGTCTATTGCCTTCGGTTCGCTGGC
CGTCGCCATCACACCCCTGTGGTGGTCCTACTTCGCCGAACTCTACGGTC
GTCGTCTCGTCTATCTGTTATCTTTCTTCTTCGTCGGTATTTTCTGTATC
CTAGCAGCCATCAGCCCCAATATCGGTATGTTCATCGCCATGCGCCTTCT
TGGCAGCGCCTCAAGCGCTTCCCTACAATCCGTTAGCGCAGGCACAATCT
CCGACATGTTTGAGACGCACGAGCGCGGAAAGGCCATGGGCGCCTTCATG
CTAGGACCCATGCTAGGCCCCATGTTTGCCCCTATCATCGGCGGAGCGCT
CACGATGCGGTGGGGATGGCGCAGCACACAATGGTTCATGGTAATTTACG
GCTGGACGGTGTTCATGGTGATGGTCTTCTTTTTACCAGAGACAGCGACA
AATCTGGCAGAGACTCAGCGCGAGCACCGCGCTAACGCTAGCAGCCCTGT
CAAGAAAGCCGCCCACTTTCTCCTCAAGCCCATAGAGGCTGCCAAGCTCC
TCCAGTACCCGCCTATCCTAATTACGGTCTACTATACAGCGATTGTGTTT
GCGACTTATTACCTTATTTGCGTCTCAATCGAGGATACCTTCGCTGTGGC
CCCCTACTACTGGAGTCCCGTGACCGTCGGGGTCGCCTACATTCCCGGAG
GGCTGGGGTTGTTGTTCGGGGCAATCATCGGTGGTCGCTGGCAGGATGCA
ATCATGGCACGCACGGCGCGCAAGGAGGGCCGATATGACGATGCAGGAGA
GCTGATACTGCATCCCGTAGACCGGTTGGGGGATAATTGCCTGATGGCGG
GCATTCTCTTCCCTGGTGCGCTTTTGTGGTGGGGATGGTCAGCCGAGAAG
CAGATCTTCTGGCTGGTGCCGCTGATCGGAAATTTCTTCTATGGCTTCAG
TGGAATGATTCTCACCAACGTGACCATGACCATGCTGACCGAGTTCACCC
CTAAGAAATCGACCGTTGGTGTGGCGGTGAACAACCTGTTGCGGAACAGC
CTGTCGTGTGTCAGTGCTGTCATCGCTCAACCGCTATTTGATGCCATTGG
GACTGGATGGTCGTTCACGGCTGCCTGTCTCTTCTGTCTGCTAAGTGGCA
TTCCGTTGATCCTTCTGCGGATGAAGCGGGAGGAATGGAGCCGGAAGATG
AAGGCTACGCTAGGGAGTGAATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004539ATCC10864_004539Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004539-T1.exon1ATCC10864_004539-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_004539-T1.exon2ATCC10864_004539-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004539-T1.cdsATCC10864_004539-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004539-T1ATCC10864_004539-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036259
InterProIPR011701
PFAMPF07690
InterProIPR020846
Properties
Property NameValue
NoteSMCOG1106:major facilitator transporter
NoteantiSMASH:Cluster_1000074.1
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000074supercontigMCQH01000074:270526..272187 +
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