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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000074:454263..455300+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_004605-T1 ID=ATCC10864_004605-T1|Name=ATCC10864_004605-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1038bp|location=Sequence derived from alignment at MCQH01000074:454263..455300+ (Aspergillus niger ATCC 10864)
ATGCCCCTAGTCGAAGACAGTCCTCGCGAGGACATCGACGCGATCCAAAT
ACCCTCTACAACCCCCAGTCACGACAATGAAGCTCATAATGAAGAACACT
ACGACGATAACGACGTCCCCGTCAACAGAAAAACCAGCTTTGGTGGTCGT
CTTAATCAATACTTCCACACAGCAAAACCCACATCATCAGCGCCACCAGC
ACTCCCATCCACGAAACAAATCACTACCAGCACTTCCTCTCCTCTCAAAC
GCAAACGAACCACACCACCAACAGCACTCATAACACGGATAACCCGCTCG
CGCTCCCGCTCCTCCACCTCAACCCCAACCAGCACCACCACGACTACCTC
CTCCCCACGCCCACGCAAAACCCCCACACCCACACCCCCCACCTCCTCAG
CAGCAGACTCCCTCCTCGTCGACACCATCCCACCCAACCTAACCCTCCTC
CTCGTGGGTGTAAACCCGGGGGTTCTAACGGGCGTAACAGGCTACGCCTA
CGCACACCCGAGCAACCTCTTCTGGAAGCTCCTGCACTGGTCCGGGATCA
CACCCATCCGCCACCCACCCTCCGATACATACAAACTTCCCGAACTATAT
AACATCGGCAACACGAATATTGTGGAGCGTCCGACGCGGGACGCGAGTAT
GCTCAGCAAGAAGGAGATGGATGCAGGAGTACCGGTTCTGGAAGAGAAGG
TGAGGGAGAAAAGACCGGAAGTGGTGTGTCTTGTGGGCAAGAGTATCTGG
GAGGCGGTTTGGAGGGTTAAGGTTGGACGGGGGATTAGGAAGGAAGAGTT
TAGGTATGGGTGGCAGGATTTGGAGATGAATATGGGGAGAGTGGGTGGTG
AAGGCGGGTGGGAGGGGGCCAGGGTGTTTGTGGCTACGACTACTAGTGGG
TTGGCGGCGGGGATGTCGTTGCAGGAGAAGAGGGAGGTTTGGGATGAGTT
GGGGAGGTGGGTTTGTGAGAGGAGGAAAGTATGGGAGAGGGAAAGGGAGA
AGGTGGAAGTTGGTGGTGATGATACTAAAGTAGAATAG back to topCoding sequence (CDS) from alignment at MCQH01000074:454263..455300+ >ATCC10864_004605-T1 ID=ATCC10864_004605-T1|Name=ATCC10864_004605-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1038bp|location=Sequence derived from alignment at MCQH01000074:454263..455300+ (Aspergillus niger ATCC 10864)
ATGCCCCTAGTCGAAGACAGTCCTCGCGAGGACATCGACGCGATCCAAAT
ACCCTCTACAACCCCCAGTCACGACAATGAAGCTCATAATGAAGAACACT
ACGACGATAACGACGTCCCCGTCAACAGAAAAACCAGCTTTGGTGGTCGT
CTTAATCAATACTTCCACACAGCAAAACCCACATCATCAGCGCCACCAGC
ACTCCCATCCACGAAACAAATCACTACCAGCACTTCCTCTCCTCTCAAAC
GCAAACGAACCACACCACCAACAGCACTCATAACACGGATAACCCGCTCG
CGCTCCCGCTCCTCCACCTCAACCCCAACCAGCACCACCACGACTACCTC
CTCCCCACGCCCACGCAAAACCCCCACACCCACACCCCCCACCTCCTCAG
CAGCAGACTCCCTCCTCGTCGACACCATCCCACCCAACCTAACCCTCCTC
CTCGTGGGTGTAAACCCGGGGGTTCTAACGGGCGTAACAGGCTACGCCTA
CGCACACCCGAGCAACCTCTTCTGGAAGCTCCTGCACTGGTCCGGGATCA
CACCCATCCGCCACCCACCCTCCGATACATACAAACTTCCCGAACTATAT
AACATCGGCAACACGAATATTGTGGAGCGTCCGACGCGGGACGCGAGTAT
GCTCAGCAAGAAGGAGATGGATGCAGGAGTACCGGTTCTGGAAGAGAAGG
TGAGGGAGAAAAGACCGGAAGTGGTGTGTCTTGTGGGCAAGAGTATCTGG
GAGGCGGTTTGGAGGGTTAAGGTTGGACGGGGGATTAGGAAGGAAGAGTT
TAGGTATGGGTGGCAGGATTTGGAGATGAATATGGGGAGAGTGGGTGGTG
AAGGCGGGTGGGAGGGGGCCAGGGTGTTTGTGGCTACGACTACTAGTGGG
TTGGCGGCGGGGATGTCGTTGCAGGAGAAGAGGGAGGTTTGGGATGAGTT
GGGGAGGTGGGTTTGTGAGAGGAGGAAAGTATGGGAGAGGGAAAGGGAGA
AGGTGGAAGTTGGTGGTGATGATACTAAAGTAGAATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006285 | base-excision repair, AP site formation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000700 | mismatch base pair DNA N-glycosylase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR036895 |
| InterPro | IPR005122 |
| PFAM | PF03167 |
| InterPro | IPR015637 |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000074 | supercontig | MCQH01000074:454263..455300 + |
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