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ATCC10864_004708-T1, ATCC10864_004708-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004708-T1
Unique NameATCC10864_004708-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000084:260362..261813-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004708-T1 ID=ATCC10864_004708-T1|Name=ATCC10864_004708-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1452bp|location=Sequence derived from alignment at MCQH01000084:260362..261813- (Aspergillus niger ATCC 10864)
ATGTCGTCGACCTCTCCCTCGAAGGAACCGGAGGTGGAACCCGAAGTTCA
ATCGGGTGAAGACCAGGAACAAATGGATAAGGAACAACAAGACACTCAGG
CGCAGGGTCAGGGAGAGTTCGAGGTGAAGGAGCAGGATAGATGGCTACCA
ATTGCAAATGGTTAGTTACGTTCCCTTGCAGCTTTCTCTTTTTCTGATTT
GCGCGTACCTTACGTTTATCTGCTGGTCAACCGCCTCTTGCCCTACTATG
GTGGTTCACCCACCCCCCCCTTCAACCACCCCCTAGTTGCTTTATCTGAT
CATATCCGCCGGCTCTTCTGTATAATTTTTTGTGACTTGGATTTTCATGG
CTCGGATACAGCCTACCTTGGCCCTTTTATCGTTCGTCTTCTGGTTGCTC
GCACATTACCCATCATAGAAGCTCGCATACTCCCCCCCAATGTCTGGAAG
TAAAAGACGCCTGATCACTTTCATCTATGCTTGCGACTCCCGCATTTATC
ACAGTTGATACCAAATTAGGATACTAATGTTGCAAATCAAGTGGCCCGCA
TCATGAAGCTGGCTTTGCCTGAAAATGCCAAAATCGCAAAGGAGGCCAAG
GAGTGTATGCAAGAGTGTGTGAGCGAGTTTATCTCATTCATCACTAGCGA
AGGTTGGTGCGACCACACCTGCTCTACAAGCTCTTTCACTGACGGAGTCT
CGCACATTTGTCCGTAGCCTCCGAGAAATGCCAGCAAGAAAAGCGCAAGA
CCGTTAACGGGGAGGACATTCTATTCGCCATGACCTCCCTCGGCTTTGAA
AACTATGCAGAGGCCCTTAAGATTTACCTGTCCAAGTATCGCGAGGTGAG
ACCTGTGCAACGTCCCTAATCATGTTGCCTCTTTTTCGTAACAGGCGACA
TTGAGTTTCATGACGTATCCGGACGCTAATGATTCCTCTAGACCCAATCC
GCCAGAGGCGAGCACCAGAACCGTCCAACAAGCAGTGGATATGGTGCTGG
CGCGCCCGTAGGGGCCCCGGGACCTGCCGGTCCTGGTGGCCGTCCAATGG
CACCAGGTGCAGGGTTTCCTGATGCTGCTGACAGCGCCAACAATATCATG
AACCAAAGCTTGGACCCGTCTGAGCAGGACACTTCCGCTTATGGCTACCC
CCCGATGGTCGGCCAGCCGCACAACGGCACCGCTGGTGAATCTTATTAGT
ATGCTATTGTGCGGGAGAACCATCCGCTGGACTTGACGACTATCCCACAG
CAAGGGTCTTCTTCGGAATCGAACAAGAAGAGAATCGAACATCAGCCTCA
CCTCACACCCACAGAGGCTAGATGCCCCTCGTCTCCAGCATGAAAAGCGG
CTGGGATCACAGGCCCAAACGACGAACGTTCCCGGATGTTACTCCCTGTA
CAGCAATCCTAATAAAGCGGTACGATACGATGGGTTACTTACGGGATATT
AA
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Coding sequence (CDS) from alignment at MCQH01000084:260362..261813-

>ATCC10864_004708-T1 ID=ATCC10864_004708-T1|Name=ATCC10864_004708-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4290bp|location=Sequence derived from alignment at MCQH01000084:260362..261813- (Aspergillus niger ATCC 10864)
CAAGGGTCTTCTTCGGAATCGAACAAGAAGAGAATCGAACATCAGCCTCA
CCTCACACCCACAGAGGCTAGATGCCCCTCGTCTCCAGCATGAAAAGCGG
CTGGGATCACAGGCCCAAACGACGAACGTTCCCGGATGTTACTCCCTGTA
CAGCAATCCTAATAAAGCGGTACGATACGATGGGTTACTTACGGGATATT
AAACCCAATCCGCCAGAGGCGAGCACCAGAACCGTCCAACAAGCAGTGGA
TATGGTGCTGGCGCGCCCGTAGGGGCCCCGGGACCTGCCGGTCCTGGTGG
CCGTCCAATGGCACCAGGTGCAGGGTTTCCTGATGCTGCTGACAGCGCCA
ACAATATCATGAACCAAAGCTTGGACCCGTCTGAGCAGGACACTTCCGCT
TATGGCTACCCCCCGATGGTCGGCCAGCCGCACAACGGCACCGCTGGTGA
ATCTTATTACCTCCGAGAAATGCCAGCAAGAAAAGCGCAAGACCGTTAAC
GGGGAGGACATTCTATTCGCCATGACCTCCCTCGGCTTTGAAAACTATGC
AGAGGCCCTTAAGATTTACCTGTCCAAGTATCGCGAGTGGCCCGCATCAT
GAAGCTGGCTTTGCCTGAAAATGCCAAAATCGCAAAGGAGGCCAAGGAGT
GTATGCAAGAGTGTGTGAGCGAGTTTATCTCATTCATCACTAGCGAAGAT
GTCGTCGACCTCTCCCTCGAAGGAACCGGAGGTGGAACCCGAAGTTCAAT
CGGGTGAAGACCAGGAACAAATGGATAAGGAACAACAAGACACTCAGGCG
CAGGGTCAGGGAGAGTTCGAGGTGAAGGAGCAGGATAGATGGCTACCAAT
TGCAAATGCAAGGGTCTTCTTCGGAATCGAACAAGAAGAGAATCGAACAT
CAGCCTCACCTCACACCCACAGAGGCTAGATGCCCCTCGTCTCCAGCATG
AAAAGCGGCTGGGATCACAGGCCCAAACGACGAACGTTCCCGGATGTTAC
TCCCTGTACAGCAATCCTAATAAAGCGGTACGATACGATGGGTTACTTAC
GGGATATTAAACCCAATCCGCCAGAGGCGAGCACCAGAACCGTCCAACAA
GCAGTGGATATGGTGCTGGCGCGCCCGTAGGGGCCCCGGGACCTGCCGGT
CCTGGTGGCCGTCCAATGGCACCAGGTGCAGGGTTTCCTGATGCTGCTGA
CAGCGCCAACAATATCATGAACCAAAGCTTGGACCCGTCTGAGCAGGACA
CTTCCGCTTATGGCTACCCCCCGATGGTCGGCCAGCCGCACAACGGCACC
GCTGGTGAATCTTATTACCTCCGAGAAATGCCAGCAAGAAAAGCGCAAGA
CCGTTAACGGGGAGGACATTCTATTCGCCATGACCTCCCTCGGCTTTGAA
AACTATGCAGAGGCCCTTAAGATTTACCTGTCCAAGTATCGCGAGTGGCC
CGCATCATGAAGCTGGCTTTGCCTGAAAATGCCAAAATCGCAAAGGAGGC
CAAGGAGTGTATGCAAGAGTGTGTGAGCGAGTTTATCTCATTCATCACTA
GCGAAGATGTCGTCGACCTCTCCCTCGAAGGAACCGGAGGTGGAACCCGA
AGTTCAATCGGGTGAAGACCAGGAACAAATGGATAAGGAACAACAAGACA
CTCAGGCGCAGGGTCAGGGAGAGTTCGAGGTGAAGGAGCAGGATAGATGG
CTACCAATTGCAAATGCAAGGGTCTTCTTCGGAATCGAACAAGAAGAGAA
TCGAACATCAGCCTCACCTCACACCCACAGAGGCTAGATGCCCCTCGTCT
CCAGCATGAAAAGCGGCTGGGATCACAGGCCCAAACGACGAACGTTCCCG
GATGTTACTCCCTGTACAGCAATCCTAATAAAGCGGTACGATACGATGGG
TTACTTACGGGATATTAAACCCAATCCGCCAGAGGCGAGCACCAGAACCG
TCCAACAAGCAGTGGATATGGTGCTGGCGCGCCCGTAGGGGCCCCGGGAC
CTGCCGGTCCTGGTGGCCGTCCAATGGCACCAGGTGCAGGGTTTCCTGAT
GCTGCTGACAGCGCCAACAATATCATGAACCAAAGCTTGGACCCGTCTGA
GCAGGACACTTCCGCTTATGGCTACCCCCCGATGGTCGGCCAGCCGCACA
ACGGCACCGCTGGTGAATCTTATTACCTCCGAGAAATGCCAGCAAGAAAA
GCGCAAGACCGTTAACGGGGAGGACATTCTATTCGCCATGACCTCCCTCG
GCTTTGAAAACTATGCAGAGGCCCTTAAGATTTACCTGTCCAAGTATCGC
GAGTGGCCCGCATCATGAAGCTGGCTTTGCCTGAAAATGCCAAAATCGCA
AAGGAGGCCAAGGAGTGTATGCAAGAGTGTGTGAGCGAGTTTATCTCATT
CATCACTAGCGAAGATGTCGTCGACCTCTCCCTCGAAGGAACCGGAGGTG
GAACCCGAAGTTCAATCGGGTGAAGACCAGGAACAAATGGATAAGGAACA
ACAAGACACTCAGGCGCAGGGTCAGGGAGAGTTCGAGGTGAAGGAGCAGG
ATAGATGGCTACCAATTGCAAATGCAAGGGTCTTCTTCGGAATCGAACAA
GAAGAGAATCGAACATCAGCCTCACCTCACACCCACAGAGGCTAGATGCC
CCTCGTCTCCAGCATGAAAAGCGGCTGGGATCACAGGCCCAAACGACGAA
CGTTCCCGGATGTTACTCCCTGTACAGCAATCCTAATAAAGCGGTACGAT
ACGATGGGTTACTTACGGGATATTAAACCCAATCCGCCAGAGGCGAGCAC
CAGAACCGTCCAACAAGCAGTGGATATGGTGCTGGCGCGCCCGTAGGGGC
CCCGGGACCTGCCGGTCCTGGTGGCCGTCCAATGGCACCAGGTGCAGGGT
TTCCTGATGCTGCTGACAGCGCCAACAATATCATGAACCAAAGCTTGGAC
CCGTCTGAGCAGGACACTTCCGCTTATGGCTACCCCCCGATGGTCGGCCA
GCCGCACAACGGCACCGCTGGTGAATCTTATTACCTCCGAGAAATGCCAG
CAAGAAAAGCGCAAGACCGTTAACGGGGAGGACATTCTATTCGCCATGAC
CTCCCTCGGCTTTGAAAACTATGCAGAGGCCCTTAAGATTTACCTGTCCA
AGTATCGCGAGTGGCCCGCATCATGAAGCTGGCTTTGCCTGAAAATGCCA
AAATCGCAAAGGAGGCCAAGGAGTGTATGCAAGAGTGTGTGAGCGAGTTT
ATCTCATTCATCACTAGCGAAGATGTCGTCGACCTCTCCCTCGAAGGAAC
CGGAGGTGGAACCCGAAGTTCAATCGGGTGAAGACCAGGAACAAATGGAT
AAGGAACAACAAGACACTCAGGCGCAGGGTCAGGGAGAGTTCGAGGTGAA
GGAGCAGGATAGATGGCTACCAATTGCAAATGCAAGGGTCTTCTTCGGAA
TCGAACAAGAAGAGAATCGAACATCAGCCTCACCTCACACCCACAGAGGC
TAGATGCCCCTCGTCTCCAGCATGAAAAGCGGCTGGGATCACAGGCCCAA
ACGACGAACGTTCCCGGATGTTACTCCCTGTACAGCAATCCTAATAAAGC
GGTACGATACGATGGGTTACTTACGGGATATTAAACCCAATCCGCCAGAG
GCGAGCACCAGAACCGTCCAACAAGCAGTGGATATGGTGCTGGCGCGCCC
GTAGGGGCCCCGGGACCTGCCGGTCCTGGTGGCCGTCCAATGGCACCAGG
TGCAGGGTTTCCTGATGCTGCTGACAGCGCCAACAATATCATGAACCAAA
GCTTGGACCCGTCTGAGCAGGACACTTCCGCTTATGGCTACCCCCCGATG
GTCGGCCAGCCGCACAACGGCACCGCTGGTGAATCTTATTACCTCCGAGA
AATGCCAGCAAGAAAAGCGCAAGACCGTTAACGGGGAGGACATTCTATTC
GCCATGACCTCCCTCGGCTTTGAAAACTATGCAGAGGCCCTTAAGATTTA
CCTGTCCAAGTATCGCGAGTGGCCCGCATCATGAAGCTGGCTTTGCCTGA
AAATGCCAAAATCGCAAAGGAGGCCAAGGAGTGTATGCAAGAGTGTGTGA
GCGAGTTTATCTCATTCATCACTAGCGAAGATGTCGTCGACCTCTCCCTC
GAAGGAACCGGAGGTGGAACCCGAAGTTCAATCGGGTGAAGACCAGGAAC
AAATGGATAAGGAACAACAAGACACTCAGGCGCAGGGTCAGGGAGAGTTC
GAGGTGAAGGAGCAGGATAGATGGCTACCAATTGCAAATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0016602CCAAT-binding factor complex
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
GO:0046982protein heterodimerization activity
GO:0001228DNA-binding transcription activator activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004708ATCC10864_004708Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004708-T1ATCC10864_004708-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004708-T1.cdsATCC10864_004708-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004708-T1.exon5ATCC10864_004708-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_004708-T1.exon4ATCC10864_004708-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_004708-T1.exon3ATCC10864_004708-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_004708-T1.exon2ATCC10864_004708-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004708-T1.exon1ATCC10864_004708-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR003956
PFAMPF00808
InterProIPR027113
InterProIPR009072
PFAMPF00125
InterProIPR003958
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000084supercontigMCQH01000084:260362..261813 -
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