You are here

Home

ATCC10864_004737-T1, ATCC10864_004737-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004737-T1
Unique NameATCC10864_004737-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000084:358720..359659-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004737-T1 ID=ATCC10864_004737-T1|Name=ATCC10864_004737-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=940bp|location=Sequence derived from alignment at MCQH01000084:358720..359659- (Aspergillus niger ATCC 10864)
ATGCCCCCGCTTCGTATCGCCATCCTTGAATGCGACACCCCAGTCGAAAA
AGTAAACAACAAATATGGAGGCTATCGCGGCGTATTCTCACTCCTGCTGC
GTGAAAGTGCTGCAGCACTAGGACAACCCGATAAGCTAGACCCAGAAACC
GGCCTCGAGTTTAGCGGCTGGGACGTGGTAACTGCGCAAGAGTACCCCAA
CCTGGAGGATGTAGACGCAATTGTTTTGTCCGGGTCAAGTGAGTTAGCTA
CCTACCCTTCGTGCTCTTCCTTAATTCCCGCGCACCGTGCAGCATGCACT
TCCTCTGCAAGGCGCGCCCTGTGACTCACATTGTCTCCTAGAACACGATT
CCTTTGAGGACCACCCTTGGATCCTCAAGCTGGTTGAATTCACCAAAAAA
GCTTTCGAAGACAAGCGCGTTAAGATTTTCGCTATTTGCTTCGGCCATCA
GATCCTGGCACGTGCGCTTGGCGCCAGAGTTGGTCGCAACACTGCAGGAT
GGGAACTTGCAGTGTGTGAGGTGGACTTGACTGAGACGGGGAAGGAGTTG
TTCGGGAGGGATAAGCTTGTATGTCTACCATCCTTCTCTCCGTCACCAGG
GCATGCATATAGCTTTTATGTGTATGGGTTCTATGCTGACAAAGTATGTT
TACAGCGCATTCATCAAATGCACCAGGATATTGCGTACGGGTACCCATCC
GAGGTCATCTCCCTGGGCGCTTCCCCGAGGTGTGCAGTACAGGGCATGTA
TGTCCCTGGGAAGTTGATCTCTGTCCAGGGCCATCCGGAATTCAGAGAAG
ACATCATGACCGAGATCCTTACTTTGCGGACTGCGGCTGGTATCTTCTCG
AAAGAACAATCAGAAGATGCCTTTAATCGCGCAGGCATCCCACACGACGG
CATTGCGATTACCATGGCCTTCTTGAAGCTTCTGATTTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000084:358720..359659-

>ATCC10864_004737-T1 ID=ATCC10864_004737-T1|Name=ATCC10864_004737-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2250bp|location=Sequence derived from alignment at MCQH01000084:358720..359659- (Aspergillus niger ATCC 10864)
CGCATTCATCAAATGCACCAGGATATTGCGTACGGGTACCCATCCGAGGT
CATCTCCCTGGGCGCTTCCCCGAGGTGTGCAGTACAGGGCATGTATGTCC
CTGGGAAGTTGATCTCTGTCCAGGGCCATCCGGAATTCAGAGAAGACATC
ATGACCGAGATCCTTACTTTGCGGACTGCGGCTGGTATCTTCTCGAAAGA
ACAATCAGAAGATGCCTTTAATCGCGCAGGCATCCCACACGACGGCATTG
CGATTACCATGGCCTTCTTGAAGCTTCTGATTTGAAACACGATTCCTTTG
AGGACCACCCTTGGATCCTCAAGCTGGTTGAATTCACCAAAAAAGCTTTC
GAAGACAAGCGCGTTAAGATTTTCGCTATTTGCTTCGGCCATCAGATCCT
GGCACGTGCGCTTGGCGCCAGAGTTGGTCGCAACACTGCAGGATGGGAAC
TTGCAGTGTGTGAGGTGGACTTGACTGAGACGGGGAAGGAGTTGTTCGGG
AGGGATAAGCTTATGCCCCCGCTTCGTATCGCCATCCTTGAATGCGACAC
CCCAGTCGAAAAAGTAAACAACAAATATGGAGGCTATCGCGGCGTATTCT
CACTCCTGCTGCGTGAAAGTGCTGCAGCACTAGGACAACCCGATAAGCTA
GACCCAGAAACCGGCCTCGAGTTTAGCGGCTGGGACGTGGTAACTGCGCA
AGAGTACCCCAACCTGGAGGATGTAGACGCAATTGTTTTGTCCGGGTCAA
CGCATTCATCAAATGCACCAGGATATTGCGTACGGGTACCCATCCGAGGT
CATCTCCCTGGGCGCTTCCCCGAGGTGTGCAGTACAGGGCATGTATGTCC
CTGGGAAGTTGATCTCTGTCCAGGGCCATCCGGAATTCAGAGAAGACATC
ATGACCGAGATCCTTACTTTGCGGACTGCGGCTGGTATCTTCTCGAAAGA
ACAATCAGAAGATGCCTTTAATCGCGCAGGCATCCCACACGACGGCATTG
CGATTACCATGGCCTTCTTGAAGCTTCTGATTTGAAACACGATTCCTTTG
AGGACCACCCTTGGATCCTCAAGCTGGTTGAATTCACCAAAAAAGCTTTC
GAAGACAAGCGCGTTAAGATTTTCGCTATTTGCTTCGGCCATCAGATCCT
GGCACGTGCGCTTGGCGCCAGAGTTGGTCGCAACACTGCAGGATGGGAAC
TTGCAGTGTGTGAGGTGGACTTGACTGAGACGGGGAAGGAGTTGTTCGGG
AGGGATAAGCTTATGCCCCCGCTTCGTATCGCCATCCTTGAATGCGACAC
CCCAGTCGAAAAAGTAAACAACAAATATGGAGGCTATCGCGGCGTATTCT
CACTCCTGCTGCGTGAAAGTGCTGCAGCACTAGGACAACCCGATAAGCTA
GACCCAGAAACCGGCCTCGAGTTTAGCGGCTGGGACGTGGTAACTGCGCA
AGAGTACCCCAACCTGGAGGATGTAGACGCAATTGTTTTGTCCGGGTCAA
CGCATTCATCAAATGCACCAGGATATTGCGTACGGGTACCCATCCGAGGT
CATCTCCCTGGGCGCTTCCCCGAGGTGTGCAGTACAGGGCATGTATGTCC
CTGGGAAGTTGATCTCTGTCCAGGGCCATCCGGAATTCAGAGAAGACATC
ATGACCGAGATCCTTACTTTGCGGACTGCGGCTGGTATCTTCTCGAAAGA
ACAATCAGAAGATGCCTTTAATCGCGCAGGCATCCCACACGACGGCATTG
CGATTACCATGGCCTTCTTGAAGCTTCTGATTTGAAACACGATTCCTTTG
AGGACCACCCTTGGATCCTCAAGCTGGTTGAATTCACCAAAAAAGCTTTC
GAAGACAAGCGCGTTAAGATTTTCGCTATTTGCTTCGGCCATCAGATCCT
GGCACGTGCGCTTGGCGCCAGAGTTGGTCGCAACACTGCAGGATGGGAAC
TTGCAGTGTGTGAGGTGGACTTGACTGAGACGGGGAAGGAGTTGTTCGGG
AGGGATAAGCTTATGCCCCCGCTTCGTATCGCCATCCTTGAATGCGACAC
CCCAGTCGAAAAAGTAAACAACAAATATGGAGGCTATCGCGGCGTATTCT
CACTCCTGCTGCGTGAAAGTGCTGCAGCACTAGGACAACCCGATAAGCTA
GACCCAGAAACCGGCCTCGAGTTTAGCGGCTGGGACGTGGTAACTGCGCA
AGAGTACCCCAACCTGGAGGATGTAGACGCAATTGTTTTGTCCGGGTCAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004737ATCC10864_004737Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004737-T1ATCC10864_004737-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004737-T1.cdsATCC10864_004737-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004737-T1.exon3ATCC10864_004737-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_004737-T1.exon2ATCC10864_004737-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004737-T1.exon1ATCC10864_004737-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00117
InterProIPR029062
InterProIPR017926
Properties
Property NameValue
NoteMEROPS:MER0043475
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000084supercontigMCQH01000084:358720..359659 -
Powered by Drupal