You are here

ATCC10864_004924-T1, ATCC10864_004924-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004924-T1
Unique NameATCC10864_004924-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000130:195148..196045-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004924-T1 ID=ATCC10864_004924-T1|Name=ATCC10864_004924-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=898bp|location=Sequence derived from alignment at MCQH01000130:195148..196045- (Aspergillus niger ATCC 10864)
ATGGCCAAGCTGGAACCCTACGTGCCAGGCTACTACCTGTGGAGCTACAT GCCCTCCGTTCCGGCAGCGGTTATCTTTTTCGTCCTCTTCCTGGGGGCCA CCGGAATCCACTTCTTCAAGCTAATCCGATCTCGAGCATGGTTCAATATC CCCTTAGCCATTGGCGGCATTTGTATGTATTCCCTGTTATACTTATATAC TCCACAAAAGACAGCCTTATGAACTAACACACAGTACAGTTGAGCTTATC GGATTCATCGCAAGAATAATTTCGCATTTCCATACAGCGGATCTTGGGCC TTACTGTATGCAGAGCGTGCTCATTCTCCTCGCTCCAGTTCTCTTCGCCG CATCTGTATACATGACGCTAGGTCGGATCATACGGAGAGTCAACGGAGAG CAACACTCTCTAATCCCCCTTCGTTGGTTGACGAGGGTCTTTGTCACGAG CGATGTTCTTGCCTTCCTCATTCAAGGCAACGGAGCGGGCTTGCAGGTGA TGGATTCAATGCAGACCTTATCGAAAGTCATTGTTATAGTCGGCCTTGTC TTCCAAGTGGGCATGTTCGCTTTCTTCATCATTGTCTCGCTTGTATTCCA CAAGCGTATGCAAAAGCGTCCGACATCCGATGCACAGTCACCGTGGAAAT TTCACATGTATACGCTCTTCGCGGTCAGTGGTCTCATCCTGGTTCGGTCG ATTTACCGTGTTGTTGAATATGCGATGGGGTATAACGGCTACCTCTTGAC GAATGAGTGGCCACTCTATGTGTTTGACTCTGTGTTGATGTGGCTTGTTA TGGCGATTTGGGCTACGAGATATCCTGGCGATATTCAGACAGGGAAGCCT GAGATGGAGCTCCTTGCGACAAGGAGTGATGATGATACGACTGTATGA
back to top

Coding sequence (CDS) from alignment at MCQH01000130:195148..196045-

>ATCC10864_004924-T1 ID=ATCC10864_004924-T1|Name=ATCC10864_004924-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1662bp|location=Sequence derived from alignment at MCQH01000130:195148..196045- (Aspergillus niger ATCC 10864)
TTGAGCTTATCGGATTCATCGCAAGAATAATTTCGCATTTCCATACAGCG
GATCTTGGGCCTTACTGTATGCAGAGCGTGCTCATTCTCCTCGCTCCAGT
TCTCTTCGCCGCATCTGTATACATGACGCTAGGTCGGATCATACGGAGAG
TCAACGGAGAGCAACACTCTCTAATCCCCCTTCGTTGGTTGACGAGGGTC
TTTGTCACGAGCGATGTTCTTGCCTTCCTCATTCAAGGCAACGGAGCGGG
CTTGCAGGTGATGGATTCAATGCAGACCTTATCGAAAGTCATTGTTATAG
TCGGCCTTGTCTTCCAAGTGGGCATGTTCGCTTTCTTCATCATTGTCTCG
CTTGTATTCCACAAGCGTATGCAAAAGCGTCCGACATCCGATGCACAGTC
ACCGTGGAAATTTCACATGTATACGCTCTTCGCGGTCAGTGGTCTCATCC
TGGTTCGGTCGATTTACCGTGTTGTTGAATATGCGATGGGGTATAACGGC
TACCTCTTGACGAATGAGTGGCCACTCTATGTGTTTGACTCTGTGTTGAT
GTGGCTTGTTATGGCGATTTGGGCTACGAGATATCCTGGCGATATTCAGA
CAGGGAAGCCTGAGATGGAGCTCCTTGCGACAAGGAGTGATGATGATACG
ACTGTATGAATGGCCAAGCTGGAACCCTACGTGCCAGGCTACTACCTGTG
GAGCTACATGCCCTCCGTTCCGGCAGCGGTTATCTTTTTCGTCCTCTTCC
TGGGGGCCACCGGAATCCACTTCTTCAAGCTAATCCGATCTCGAGCATGG
TTCAATATCCCCTTAGCCATTGGCGGCATTTTTGAGCTTATCGGATTCAT
CGCAAGAATAATTTCGCATTTCCATACAGCGGATCTTGGGCCTTACTGTA
TGCAGAGCGTGCTCATTCTCCTCGCTCCAGTTCTCTTCGCCGCATCTGTA
TACATGACGCTAGGTCGGATCATACGGAGAGTCAACGGAGAGCAACACTC
TCTAATCCCCCTTCGTTGGTTGACGAGGGTCTTTGTCACGAGCGATGTTC
TTGCCTTCCTCATTCAAGGCAACGGAGCGGGCTTGCAGGTGATGGATTCA
ATGCAGACCTTATCGAAAGTCATTGTTATAGTCGGCCTTGTCTTCCAAGT
GGGCATGTTCGCTTTCTTCATCATTGTCTCGCTTGTATTCCACAAGCGTA
TGCAAAAGCGTCCGACATCCGATGCACAGTCACCGTGGAAATTTCACATG
TATACGCTCTTCGCGGTCAGTGGTCTCATCCTGGTTCGGTCGATTTACCG
TGTTGTTGAATATGCGATGGGGTATAACGGCTACCTCTTGACGAATGAGT
GGCCACTCTATGTGTTTGACTCTGTGTTGATGTGGCTTGTTATGGCGATT
TGGGCTACGAGATATCCTGGCGATATTCAGACAGGGAAGCCTGAGATGGA
GCTCCTTGCGACAAGGAGTGATGATGATACGACTGTATGAATGGCCAAGC
TGGAACCCTACGTGCCAGGCTACTACCTGTGGAGCTACATGCCCTCCGTT
CCGGCAGCGGTTATCTTTTTCGTCCTCTTCCTGGGGGCCACCGGAATCCA
CTTCTTCAAGCTAATCCGATCTCGAGCATGGTTCAATATCCCCTTAGCCA
TTGGCGGCATTT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004924ATCC10864_004924Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004924-T1ATCC10864_004924-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004924-T1.cdsATCC10864_004924-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004924-T1.exon2ATCC10864_004924-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004924-T1.exon1ATCC10864_004924-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF04479
InterProIPR007568
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000130supercontigMCQH01000130:195148..196045 -