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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000130:281312..283903- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_004955-T1 ID=ATCC10864_004955-T1|Name=ATCC10864_004955-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2592bp|location=Sequence derived from alignment at MCQH01000130:281312..283903- (Aspergillus niger ATCC 10864)
ATGCTTCTCCGGTTACCGCCTAGCCTCCATTACCCGATCACCGTCACGTC
GCTGCTGAAACAGCCCGGTGATAAGGTGGAACGGGATGAGGCGCTGTTCT
GGTATGTGTACCAGACGACTGTGACGGAGGGGGATGGGTTGGGAAATAAG
GTGGATGTGAAGCGCAAGTTTCCGACGAAGTTTGAGTCGACGGTTGATGG
GGAGGTGGTGCAGTGGAAGATTTCAAAGGGGGATGTTATTGATGAGCCGT
ATGTTCCGACGCCCTGCTGTGGTGTGTTTGGATATGGTGTTAGGATGCTA
ACATTAGGTTAGGGTCGATGTTTTGGAAATCGATGAGCCATGTGCTCATG
AGGTTCAGTTTGGTGGGCTCTGTGCCATTTGTGGCAAGGATATGACTGAG
TAAGTGGTCCCGGGTGTTTTTGTGTTGGGCCTGACTTACGATTGTGGTGC
AGTTTTTCGTACAATACCGAGGTGACTGATGTGCATCGGGCGCCGATTCA
AATGGCCCACGATAATACTACGTTGACTGTTAGTGAACAAGAAGCTACGC
GGGTTGAAGAGGATGCGAAGCGCCGCTTACTGGCGAATCGGAAACTGTCG
CTTGTCGTCGATCTGGACCAGACCATTATTCATGCTACCGTCGACCCGAC
TGTCGGAGAGTGGATGCAGGATAAGGAGAACCCGAATTATCAGGCTCTGA
GCGATGTGCGTGCGTTTCAGCTGGTAGACGATGGGCCGGGAATGCGCGGG
TGCTGGTACTATGTGAAGCTACGACCAGGGCTAGAGTCGTTTCTGCAGAA
TGTGTCGGAGATGTATGAGCTGCATATCTACACCATGGGCACGAGGTCCT
ATGCGCAACATATCGCTAGTATCATAGATCCAGACCGCAAACTTTTCGGT
GACCGTATTCTCAGCCGAGATGAGAGTGGCAGCTTGGTGGCCAAGAACCT
GCACCGGCTGTTCCCGGTGGACACCAAGATGGTCGTCATTATCGATGACC
GCGGGGACGTCTGGCGCTGGAACCCCAATCTCATCAAGGTGTCGCCGTAC
GACTTCTTCGTCGGCATCGGGGACATCAACTCTAGTTTCCTCCCGAAGAA
GCAGGAGCTGGGACCTCCCAGCAAAGGAGGTGAGAAGCCGGCAGCGAAAG
CCGCCAAGGGGGGTTTGGCGGAACATCATGTCAACGGGGCGACGGCAAAG
AGAGACGACCAGACAGAGGTATCGACATTGGAGCAGCTGGTAACCATGGG
TGGCGGCGATAATCCCAGGCTACTACAAGAACAGAGTGATGCACAAGAGG
AGACAATCATGCATCAAGTGGAGGACCGACCATTACTGCAGAAGCAAAAG
GAGCTAGACGCGGAGGACGATGCAGCAGAGAGCAGCGATACGTCCAGCAG
CATAGACGACTCACAAGATATGAGCAAGCACCGACATCACCTACTGGAGG
ACAACGATCGGGAGCTGTTCGACCTCGAGGTACGTTTGGAGCAAGTACAC
CGAGACTTTTTCGACGAATACGACAGACGACGTTCACGGGCACTGGGCGG
ACGAGTCGCCGCCCTGCGCGGCGAGAAGACTCCGTCCAAGGAGAAGGACG
TCGACCTGAAACTCGTACCGGACGTCAAAATCATCATGCCCAACATGAAG
CATCGTATCCTCGGCGGCGTGACCCTCGTGTTCTCGGGCGTGCTTCCCCT
CGGCACGGATACACAAAACGCCGACATCTCCCTCTGGGCGAAGAGCTTCG
GGGCAGTCATTGCATCAAAGATCAACATGAAGACCACGCATCTCGTTGCG
GGCCGAAACCGCACAGCCAAAGTGCGCGAAGCAACCCGGTACCCGAAAGT
CAAGATTGTTACAACACAATGGCTCCTGGACTGCCTGACGCAATGGAAGC
GCTTAGCGGAGGAACCGTACCTCCTTCCCGTGCACCCAGACGACCGCGGC
GAGCCAATCTCACCGGGATCCAAAGAGGTAGCGGAGAGCGGGTGGCTCTC
ATCGTCGGATGAGGCGACGGGCGACTCTGTAGCGGATGACGAAGAGGCAA
CAGAGGAAATTCTCAAATCCGCAGGCATATCTGAAATGTCGCCCCTCGGC
TACGACGACGAGGAGCAGGCCGAGGTCCACGAAGAGCTAAAGGAGTTCCT
GGGTAGTGACGATGAGAGCGAGAGCGACAGCGAAGCCACATTCATGGATG
AACCAGGTACTCCTTCCAGCAAGAAGCGGAAACGCGAAGAAGGAGAAGGC
GGCGGCGACGACGACGACCAGGAGACGGATAGTGCCGGCGAGGGCGACGG
GCCAAGCTCGCGGCTATCGCAGCGGATCAAGCGGTCATACGAGCGCAGCA
CGGGGTTGAAGGAGGTAGCCAGTGCAGGGACGGTAGAGTCGACAGCAAGT
ACAACAGCATCTGCGACTGAGCCGGGAACAGAGGAGCCGGAGCAGGTTGC
TGAAGAGTCGAGCCCGCCTGATCCAGCAGAGGTGGATCCAGCAGATGAGG
ATGACGAGCTGGAGCGCGAGATGATGGCTGCATTTGAGGGAGGGGATTAC
AATTCGGAGGCGGAGGAACAAATTGCGAATGAGAACGGATAG back to topCoding sequence (CDS) from alignment at MCQH01000130:281312..283903- >ATCC10864_004955-T1 ID=ATCC10864_004955-T1|Name=ATCC10864_004955-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=7425bp|location=Sequence derived from alignment at MCQH01000130:281312..283903- (Aspergillus niger ATCC 10864)
TTTTTCGTACAATACCGAGGTGACTGATGTGCATCGGGCGCCGATTCAAA
TGGCCCACGATAATACTACGTTGACTGTTAGTGAACAAGAAGCTACGCGG
GTTGAAGAGGATGCGAAGCGCCGCTTACTGGCGAATCGGAAACTGTCGCT
TGTCGTCGATCTGGACCAGACCATTATTCATGCTACCGTCGACCCGACTG
TCGGAGAGTGGATGCAGGATAAGGAGAACCCGAATTATCAGGCTCTGAGC
GATGTGCGTGCGTTTCAGCTGGTAGACGATGGGCCGGGAATGCGCGGGTG
CTGGTACTATGTGAAGCTACGACCAGGGCTAGAGTCGTTTCTGCAGAATG
TGTCGGAGATGTATGAGCTGCATATCTACACCATGGGCACGAGGTCCTAT
GCGCAACATATCGCTAGTATCATAGATCCAGACCGCAAACTTTTCGGTGA
CCGTATTCTCAGCCGAGATGAGAGTGGCAGCTTGGTGGCCAAGAACCTGC
ACCGGCTGTTCCCGGTGGACACCAAGATGGTCGTCATTATCGATGACCGC
GGGGACGTCTGGCGCTGGAACCCCAATCTCATCAAGGTGTCGCCGTACGA
CTTCTTCGTCGGCATCGGGGACATCAACTCTAGTTTCCTCCCGAAGAAGC
AGGAGCTGGGACCTCCCAGCAAAGGAGGTGAGAAGCCGGCAGCGAAAGCC
GCCAAGGGGGGTTTGGCGGAACATCATGTCAACGGGGCGACGGCAAAGAG
AGACGACCAGACAGAGGTATCGACATTGGAGCAGCTGGTAACCATGGGTG
GCGGCGATAATCCCAGGCTACTACAAGAACAGAGTGATGCACAAGAGGAG
ACAATCATGCATCAAGTGGAGGACCGACCATTACTGCAGAAGCAAAAGGA
GCTAGACGCGGAGGACGATGCAGCAGAGAGCAGCGATACGTCCAGCAGCA
TAGACGACTCACAAGATATGAGCAAGCACCGACATCACCTACTGGAGGAC
AACGATCGGGAGCTGTTCGACCTCGAGGTACGTTTGGAGCAAGTACACCG
AGACTTTTTCGACGAATACGACAGACGACGTTCACGGGCACTGGGCGGAC
GAGTCGCCGCCCTGCGCGGCGAGAAGACTCCGTCCAAGGAGAAGGACGTC
GACCTGAAACTCGTACCGGACGTCAAAATCATCATGCCCAACATGAAGCA
TCGTATCCTCGGCGGCGTGACCCTCGTGTTCTCGGGCGTGCTTCCCCTCG
GCACGGATACACAAAACGCCGACATCTCCCTCTGGGCGAAGAGCTTCGGG
GCAGTCATTGCATCAAAGATCAACATGAAGACCACGCATCTCGTTGCGGG
CCGAAACCGCACAGCCAAAGTGCGCGAAGCAACCCGGTACCCGAAAGTCA
AGATTGTTACAACACAATGGCTCCTGGACTGCCTGACGCAATGGAAGCGC
TTAGCGGAGGAACCGTACCTCCTTCCCGTGCACCCAGACGACCGCGGCGA
GCCAATCTCACCGGGATCCAAAGAGGTAGCGGAGAGCGGGTGGCTCTCAT
CGTCGGATGAGGCGACGGGCGACTCTGTAGCGGATGACGAAGAGGCAACA
GAGGAAATTCTCAAATCCGCAGGCATATCTGAAATGTCGCCCCTCGGCTA
CGACGACGAGGAGCAGGCCGAGGTCCACGAAGAGCTAAAGGAGTTCCTGG
GTAGTGACGATGAGAGCGAGAGCGACAGCGAAGCCACATTCATGGATGAA
CCAGGTACTCCTTCCAGCAAGAAGCGGAAACGCGAAGAAGGAGAAGGCGG
CGGCGACGACGACGACCAGGAGACGGATAGTGCCGGCGAGGGCGACGGGC
CAAGCTCGCGGCTATCGCAGCGGATCAAGCGGTCATACGAGCGCAGCACG
GGGTTGAAGGAGGTAGCCAGTGCAGGGACGGTAGAGTCGACAGCAAGTAC
AACAGCATCTGCGACTGAGCCGGGAACAGAGGAGCCGGAGCAGGTTGCTG
AAGAGTCGAGCCCGCCTGATCCAGCAGAGGTGGATCCAGCAGATGAGGAT
GACGAGCTGGAGCGCGAGATGATGGCTGCATTTGAGGGAGGGGATTACAA
TTCGGAGGCGGAGGAACAAATTGCGAATGAGAACGGATAGGGTCGATGTT
TTGGAAATCGATGAGCCATGTGCTCATGAGGTTCAGTTTGGTGGGCTCTG
TGCCATTTGTGGCAAGGATATGACTGAATGCTTCTCCGGTTACCGCCTAG
CCTCCATTACCCGATCACCGTCACGTCGCTGCTGAAACAGCCCGGTGATA
AGGTGGAACGGGATGAGGCGCTGTTCTGGTATGTGTACCAGACGACTGTG
ACGGAGGGGGATGGGTTGGGAAATAAGGTGGATGTGAAGCGCAAGTTTCC
GACGAAGTTTGAGTCGACGGTTGATGGGGAGGTGGTGCAGTGGAAGATTT
CAAAGGGGGATGTTATTGATGAGCCTTTTTCGTACAATACCGAGGTGACT
GATGTGCATCGGGCGCCGATTCAAATGGCCCACGATAATACTACGTTGAC
TGTTAGTGAACAAGAAGCTACGCGGGTTGAAGAGGATGCGAAGCGCCGCT
TACTGGCGAATCGGAAACTGTCGCTTGTCGTCGATCTGGACCAGACCATT
ATTCATGCTACCGTCGACCCGACTGTCGGAGAGTGGATGCAGGATAAGGA
GAACCCGAATTATCAGGCTCTGAGCGATGTGCGTGCGTTTCAGCTGGTAG
ACGATGGGCCGGGAATGCGCGGGTGCTGGTACTATGTGAAGCTACGACCA
GGGCTAGAGTCGTTTCTGCAGAATGTGTCGGAGATGTATGAGCTGCATAT
CTACACCATGGGCACGAGGTCCTATGCGCAACATATCGCTAGTATCATAG
ATCCAGACCGCAAACTTTTCGGTGACCGTATTCTCAGCCGAGATGAGAGT
GGCAGCTTGGTGGCCAAGAACCTGCACCGGCTGTTCCCGGTGGACACCAA
GATGGTCGTCATTATCGATGACCGCGGGGACGTCTGGCGCTGGAACCCCA
ATCTCATCAAGGTGTCGCCGTACGACTTCTTCGTCGGCATCGGGGACATC
AACTCTAGTTTCCTCCCGAAGAAGCAGGAGCTGGGACCTCCCAGCAAAGG
AGGTGAGAAGCCGGCAGCGAAAGCCGCCAAGGGGGGTTTGGCGGAACATC
ATGTCAACGGGGCGACGGCAAAGAGAGACGACCAGACAGAGGTATCGACA
TTGGAGCAGCTGGTAACCATGGGTGGCGGCGATAATCCCAGGCTACTACA
AGAACAGAGTGATGCACAAGAGGAGACAATCATGCATCAAGTGGAGGACC
GACCATTACTGCAGAAGCAAAAGGAGCTAGACGCGGAGGACGATGCAGCA
GAGAGCAGCGATACGTCCAGCAGCATAGACGACTCACAAGATATGAGCAA
GCACCGACATCACCTACTGGAGGACAACGATCGGGAGCTGTTCGACCTCG
AGGTACGTTTGGAGCAAGTACACCGAGACTTTTTCGACGAATACGACAGA
CGACGTTCACGGGCACTGGGCGGACGAGTCGCCGCCCTGCGCGGCGAGAA
GACTCCGTCCAAGGAGAAGGACGTCGACCTGAAACTCGTACCGGACGTCA
AAATCATCATGCCCAACATGAAGCATCGTATCCTCGGCGGCGTGACCCTC
GTGTTCTCGGGCGTGCTTCCCCTCGGCACGGATACACAAAACGCCGACAT
CTCCCTCTGGGCGAAGAGCTTCGGGGCAGTCATTGCATCAAAGATCAACA
TGAAGACCACGCATCTCGTTGCGGGCCGAAACCGCACAGCCAAAGTGCGC
GAAGCAACCCGGTACCCGAAAGTCAAGATTGTTACAACACAATGGCTCCT
GGACTGCCTGACGCAATGGAAGCGCTTAGCGGAGGAACCGTACCTCCTTC
CCGTGCACCCAGACGACCGCGGCGAGCCAATCTCACCGGGATCCAAAGAG
GTAGCGGAGAGCGGGTGGCTCTCATCGTCGGATGAGGCGACGGGCGACTC
TGTAGCGGATGACGAAGAGGCAACAGAGGAAATTCTCAAATCCGCAGGCA
TATCTGAAATGTCGCCCCTCGGCTACGACGACGAGGAGCAGGCCGAGGTC
CACGAAGAGCTAAAGGAGTTCCTGGGTAGTGACGATGAGAGCGAGAGCGA
CAGCGAAGCCACATTCATGGATGAACCAGGTACTCCTTCCAGCAAGAAGC
GGAAACGCGAAGAAGGAGAAGGCGGCGGCGACGACGACGACCAGGAGACG
GATAGTGCCGGCGAGGGCGACGGGCCAAGCTCGCGGCTATCGCAGCGGAT
CAAGCGGTCATACGAGCGCAGCACGGGGTTGAAGGAGGTAGCCAGTGCAG
GGACGGTAGAGTCGACAGCAAGTACAACAGCATCTGCGACTGAGCCGGGA
ACAGAGGAGCCGGAGCAGGTTGCTGAAGAGTCGAGCCCGCCTGATCCAGC
AGAGGTGGATCCAGCAGATGAGGATGACGAGCTGGAGCGCGAGATGATGG
CTGCATTTGAGGGAGGGGATTACAATTCGGAGGCGGAGGAACAAATTGCG
AATGAGAACGGATAGGGTCGATGTTTTGGAAATCGATGAGCCATGTGCTC
ATGAGGTTCAGTTTGGTGGGCTCTGTGCCATTTGTGGCAAGGATATGACT
GAATGCTTCTCCGGTTACCGCCTAGCCTCCATTACCCGATCACCGTCACG
TCGCTGCTGAAACAGCCCGGTGATAAGGTGGAACGGGATGAGGCGCTGTT
CTGGTATGTGTACCAGACGACTGTGACGGAGGGGGATGGGTTGGGAAATA
AGGTGGATGTGAAGCGCAAGTTTCCGACGAAGTTTGAGTCGACGGTTGAT
GGGGAGGTGGTGCAGTGGAAGATTTCAAAGGGGGATGTTATTGATGAGCC
TTTTTCGTACAATACCGAGGTGACTGATGTGCATCGGGCGCCGATTCAAA
TGGCCCACGATAATACTACGTTGACTGTTAGTGAACAAGAAGCTACGCGG
GTTGAAGAGGATGCGAAGCGCCGCTTACTGGCGAATCGGAAACTGTCGCT
TGTCGTCGATCTGGACCAGACCATTATTCATGCTACCGTCGACCCGACTG
TCGGAGAGTGGATGCAGGATAAGGAGAACCCGAATTATCAGGCTCTGAGC
GATGTGCGTGCGTTTCAGCTGGTAGACGATGGGCCGGGAATGCGCGGGTG
CTGGTACTATGTGAAGCTACGACCAGGGCTAGAGTCGTTTCTGCAGAATG
TGTCGGAGATGTATGAGCTGCATATCTACACCATGGGCACGAGGTCCTAT
GCGCAACATATCGCTAGTATCATAGATCCAGACCGCAAACTTTTCGGTGA
CCGTATTCTCAGCCGAGATGAGAGTGGCAGCTTGGTGGCCAAGAACCTGC
ACCGGCTGTTCCCGGTGGACACCAAGATGGTCGTCATTATCGATGACCGC
GGGGACGTCTGGCGCTGGAACCCCAATCTCATCAAGGTGTCGCCGTACGA
CTTCTTCGTCGGCATCGGGGACATCAACTCTAGTTTCCTCCCGAAGAAGC
AGGAGCTGGGACCTCCCAGCAAAGGAGGTGAGAAGCCGGCAGCGAAAGCC
GCCAAGGGGGGTTTGGCGGAACATCATGTCAACGGGGCGACGGCAAAGAG
AGACGACCAGACAGAGGTATCGACATTGGAGCAGCTGGTAACCATGGGTG
GCGGCGATAATCCCAGGCTACTACAAGAACAGAGTGATGCACAAGAGGAG
ACAATCATGCATCAAGTGGAGGACCGACCATTACTGCAGAAGCAAAAGGA
GCTAGACGCGGAGGACGATGCAGCAGAGAGCAGCGATACGTCCAGCAGCA
TAGACGACTCACAAGATATGAGCAAGCACCGACATCACCTACTGGAGGAC
AACGATCGGGAGCTGTTCGACCTCGAGGTACGTTTGGAGCAAGTACACCG
AGACTTTTTCGACGAATACGACAGACGACGTTCACGGGCACTGGGCGGAC
GAGTCGCCGCCCTGCGCGGCGAGAAGACTCCGTCCAAGGAGAAGGACGTC
GACCTGAAACTCGTACCGGACGTCAAAATCATCATGCCCAACATGAAGCA
TCGTATCCTCGGCGGCGTGACCCTCGTGTTCTCGGGCGTGCTTCCCCTCG
GCACGGATACACAAAACGCCGACATCTCCCTCTGGGCGAAGAGCTTCGGG
GCAGTCATTGCATCAAAGATCAACATGAAGACCACGCATCTCGTTGCGGG
CCGAAACCGCACAGCCAAAGTGCGCGAAGCAACCCGGTACCCGAAAGTCA
AGATTGTTACAACACAATGGCTCCTGGACTGCCTGACGCAATGGAAGCGC
TTAGCGGAGGAACCGTACCTCCTTCCCGTGCACCCAGACGACCGCGGCGA
GCCAATCTCACCGGGATCCAAAGAGGTAGCGGAGAGCGGGTGGCTCTCAT
CGTCGGATGAGGCGACGGGCGACTCTGTAGCGGATGACGAAGAGGCAACA
GAGGAAATTCTCAAATCCGCAGGCATATCTGAAATGTCGCCCCTCGGCTA
CGACGACGAGGAGCAGGCCGAGGTCCACGAAGAGCTAAAGGAGTTCCTGG
GTAGTGACGATGAGAGCGAGAGCGACAGCGAAGCCACATTCATGGATGAA
CCAGGTACTCCTTCCAGCAAGAAGCGGAAACGCGAAGAAGGAGAAGGCGG
CGGCGACGACGACGACCAGGAGACGGATAGTGCCGGCGAGGGCGACGGGC
CAAGCTCGCGGCTATCGCAGCGGATCAAGCGGTCATACGAGCGCAGCACG
GGGTTGAAGGAGGTAGCCAGTGCAGGGACGGTAGAGTCGACAGCAAGTAC
AACAGCATCTGCGACTGAGCCGGGAACAGAGGAGCCGGAGCAGGTTGCTG
AAGAGTCGAGCCCGCCTGATCCAGCAGAGGTGGATCCAGCAGATGAGGAT
GACGAGCTGGAGCGCGAGATGATGGCTGCATTTGAGGGAGGGGATTACAA
TTCGGAGGCGGAGGAACAAATTGCGAATGAGAACGGATAGGGTCGATGTT
TTGGAAATCGATGAGCCATGTGCTCATGAGGTTCAGTTTGGTGGGCTCTG
TGCCATTTGTGGCAAGGATATGACTGAATGCTTCTCCGGTTACCGCCTAG
CCTCCATTACCCGATCACCGTCACGTCGCTGCTGAAACAGCCCGGTGATA
AGGTGGAACGGGATGAGGCGCTGTTCTGGTATGTGTACCAGACGACTGTG
ACGGAGGGGGATGGGTTGGGAAATAAGGTGGATGTGAAGCGCAAGTTTCC
GACGAAGTTTGAGTCGACGGTTGATGGGGAGGTGGTGCAGTGGAAGATTT
CAAAGGGGGATGTTATTGATGAGCC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0070940 | dephosphorylation of RNA polymerase II C-terminal domain |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008420 | RNA polymerase II CTD heptapeptide repeat phosphatase activity |
| GO:0004721 | phosphoprotein phosphatase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR011947 |
| InterPro | IPR039189 |
| InterPro | IPR004274 |
| PFAM | PF03031 |
| InterPro | IPR001357 |
| InterPro | IPR036412 |
| PFAM | PF00533 |
| InterPro | IPR023214 |
| InterPro | IPR036420 |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000130 | supercontig | MCQH01000130:281312..283903 - |
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