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ATCC10864_004960-T1, ATCC10864_004960-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004960-T1
Unique NameATCC10864_004960-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000130:294653..297601+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004960-T1 ID=ATCC10864_004960-T1|Name=ATCC10864_004960-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2949bp|location=Sequence derived from alignment at MCQH01000130:294653..297601+ (Aspergillus niger ATCC 10864)
ATGAATGCCTGGCTAGCCGACGCCTCGAACCTTCCGAACCATGACAATGG
TGCTTTTCACCAAGCGACCATTGATCCTTCTGCGGCATTCCTCCATACCT
CTCCCACTCCCGACCCTACCCAGTTCCAGCGCATGTTCAATGGCGTGCCG
CGAAATGCCTCCCCTGGCTTCCACAACCCGAACCAGGTGATTCCGTCCAA
AAGGCCGCGACCAGAGGATGCCATGTCGATGTCGCCTCGACAGGCTCCCG
GGGCTATCGCGGCATCCCGGTCCCAGACTCCTCACCAAGTGCCTTTTGCA
GGGTACCAAGGAGCTGCGAATGGCGCGCCTCAATATCCTCCGCATCCGAC
TCCGTATCAGCACCTCCAGCAAGGAGCCTCTCCGAACGTCACCCAATCTC
CGATCATGCAGGAATTCGACCAACACGGTGTACAACGAATGGGAACAGCT
TCGCCTAGCCCGTTCTCCCCAGCCGGCCCTCAAGTAGGCTCCCACATGTC
TCCGTCACAGTCGGATCATCCGAGTAGGGTGAACACGCCGCAAAATAGCT
CATTCATGCCCAATCAACCTTTCCCTCAGCCCATGGCACCCCAGTTCCCG
CCCGCGCCTGCGATGACTACTGCCGCTGTGCAGGCGCCGATGCAAGCACA
TTACGGTGGCATGCCTCAGGGGTATCAGCAGGCCATAGCTGCCCAGCAGC
AACAGCAGCGAATGCATGCCATGCAGATGCAAAATCAAGGTCGTCCAATG
GCGATGAATCCCGCCATGGCCGGGCGACCCGTGGCAGCTGGGATGAACGC
GATGGCCAATCCTCAACAAATGGCCGCCATCAGGCAGATGCAACAGACCA
TGGCTAAACCGCCTAATCCGGAAGGGTTTATGAGGTCACTGCAGAAATTC
ATGATGTCGCGCAACCTGCCGCTCGATCCTAGTCCCGTTGTTTGCGGTCG
CCCGATCAACCTGGTCCAGCTTTATGCTACGGTCATGAAGCTCGGAGGAT
CGAAGAAGATAACAGCTGCGAATATGTGGCACGTCATTGCACAGCAACTT
CAGTTCCCGCCGATGCAGCTGCCGATGGCCATGCAGGAGCTTAGGGAGCA
TTATCAGCGGAACCTAGCTGCGTACGAGCAGGCCTTCCTCAGCACCCAGC
AGAAGCAATTTGCGGACCAAATGCAGCAAACAGCGGTGCCACGTCAACCC
AGTGACCCATCTGCCATGCAGTTCCAGTCTCCAGCCATCAAACCGGGCCA
GGGTTTCGAAAATGCACAGCAGATGGGACACCCATCGCCAAGCCCCGCGT
CTGTATCAAGTAGCGTACAACATAACGCTTCGAATGGTTTCGCGACGCCT
ACGCCTGTTAAAACCCAGGGCAAGCCGCAGAATCAGCATCGTCTCAGTAT
TTCCCGCCAGTCACAGCCTCCAGCAACGCCCAATGATCCTACTGGCCAAA
TGCCGAGTCAATCACCTGCGCAGCCGGGCAAAGGCCCAGGTCAAGTCCCC
GGCAAGCCCTCGGAGCAGCTGGATCAGTCAGATCAGCCTTTGAAGCACCA
GATTGAGGATCCCTATAAACCCATGGTCTTGCCAGAAAGCAATTTCCATG
GACCCATAGCCATCGATGAAATGTATCAGATTGGGGAGGATATTACTCGC
TTGAAGCCTAATGTTCCCAGTTTTGCTGAGCTGGGTGTAATTGATATCCA
CGCTCTCACAATGAGCATCAAATCCGGGATACATGCTGAAATGCGCATGG
CCTTGGATACGCTTACATCCATATCCTCAGAGCCGGCGATCCAAATATCG
TTAGATAACTGCGACGATCTGGTGGAGAGCTTGATCGAATGCGCCGAGGA
CCAAGCAGAGTTTCTTGCGGAACATGCCGCAGAAGTGTCTGATATGATGC
TTCTATCCTCATATGAAGAAGTCACTCGTGGATGTCAATCGGAATGGACG
TCTTTGGCGGATGTTCCAGAATTCGGCAGCCTCGACTACGAACTAGACCG
TGCCGTCGACCGACTCATCTGCATTACAACCATACTACGCAATTTCTCGT
TTATCGAGTCAAACTTTGGAATGCTGTCTACGCCCCCGGTTGTTCAATTC
ATGTCGACTATCATTCGTTACCTCGGCACACGCAATATGCTTCTAAGGAC
ACATCAGAACACATTGGATTTCATGAAGGACACAGTAACATACCTCAGCA
ACGTGGCTCACACCATTCAGTTACCGAGTAAAGAAGAAGCCCTCTGTCTT
CTGCATTTCCTTCTTGCTTTTGCACCATTCCCAGGACCTATGGGCTCGGA
GGGTATTATGTTCAATTCATACAACCCCTCAGTTCACAAGTACACACCGG
CAGCGGTTGATAGCTTGGCCAAGCTTCTGGCACGGGACGAGCCCAACCGG
ACATTCTTCAGAGCAATCTTCTCTGGCGATGGCGTTTCCATCCAGCAAGA
GTTGCTGACTCGTGCCTTTGGTCTTGCCATTTGCCCGGTCCCTGATCAGC
CGCGGAAACCCTTGGCTATAGCGGATGCTCGGAAGGTTTTCCTCATGCAA
GGCCTTTTGGCAGCGGATATCCTTTCAGGTTTTGCGGATGGGCCTATTGC
CAAGTCATGGCTGGAGTCGATCGACGGGTTTGCCATCCATCTCCTGCGAC
TCTCATGCCTCCTGAGCACGGAACGCGTTCCTCCACCGAACACCAACTCA
CGCCAATCCCATGCCGCAAGAGGCCAAGCGGAAGCGGAAGCTGCTGCTTA
CAGCTCCATAATCAATCGGGGTTTGGCGATTCTGCGTCGATTGGCCGAGA
AGTCGAAGCTTGCTGATTCCAACGCCACGTTACGGTTCCCCTCGGGGATC
ATCCCAAGGAAAGAAAGCTTGCTTGGCGCACTGCTGATGCCTAGCATAGA
CCCTGGTGTTGTACGGCAATTGATAACTTATGCACGACTAGCGGAATGA
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Coding sequence (CDS) from alignment at MCQH01000130:294653..297601+

>ATCC10864_004960-T1 ID=ATCC10864_004960-T1|Name=ATCC10864_004960-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2949bp|location=Sequence derived from alignment at MCQH01000130:294653..297601+ (Aspergillus niger ATCC 10864)
ATGAATGCCTGGCTAGCCGACGCCTCGAACCTTCCGAACCATGACAATGG
TGCTTTTCACCAAGCGACCATTGATCCTTCTGCGGCATTCCTCCATACCT
CTCCCACTCCCGACCCTACCCAGTTCCAGCGCATGTTCAATGGCGTGCCG
CGAAATGCCTCCCCTGGCTTCCACAACCCGAACCAGGTGATTCCGTCCAA
AAGGCCGCGACCAGAGGATGCCATGTCGATGTCGCCTCGACAGGCTCCCG
GGGCTATCGCGGCATCCCGGTCCCAGACTCCTCACCAAGTGCCTTTTGCA
GGGTACCAAGGAGCTGCGAATGGCGCGCCTCAATATCCTCCGCATCCGAC
TCCGTATCAGCACCTCCAGCAAGGAGCCTCTCCGAACGTCACCCAATCTC
CGATCATGCAGGAATTCGACCAACACGGTGTACAACGAATGGGAACAGCT
TCGCCTAGCCCGTTCTCCCCAGCCGGCCCTCAAGTAGGCTCCCACATGTC
TCCGTCACAGTCGGATCATCCGAGTAGGGTGAACACGCCGCAAAATAGCT
CATTCATGCCCAATCAACCTTTCCCTCAGCCCATGGCACCCCAGTTCCCG
CCCGCGCCTGCGATGACTACTGCCGCTGTGCAGGCGCCGATGCAAGCACA
TTACGGTGGCATGCCTCAGGGGTATCAGCAGGCCATAGCTGCCCAGCAGC
AACAGCAGCGAATGCATGCCATGCAGATGCAAAATCAAGGTCGTCCAATG
GCGATGAATCCCGCCATGGCCGGGCGACCCGTGGCAGCTGGGATGAACGC
GATGGCCAATCCTCAACAAATGGCCGCCATCAGGCAGATGCAACAGACCA
TGGCTAAACCGCCTAATCCGGAAGGGTTTATGAGGTCACTGCAGAAATTC
ATGATGTCGCGCAACCTGCCGCTCGATCCTAGTCCCGTTGTTTGCGGTCG
CCCGATCAACCTGGTCCAGCTTTATGCTACGGTCATGAAGCTCGGAGGAT
CGAAGAAGATAACAGCTGCGAATATGTGGCACGTCATTGCACAGCAACTT
CAGTTCCCGCCGATGCAGCTGCCGATGGCCATGCAGGAGCTTAGGGAGCA
TTATCAGCGGAACCTAGCTGCGTACGAGCAGGCCTTCCTCAGCACCCAGC
AGAAGCAATTTGCGGACCAAATGCAGCAAACAGCGGTGCCACGTCAACCC
AGTGACCCATCTGCCATGCAGTTCCAGTCTCCAGCCATCAAACCGGGCCA
GGGTTTCGAAAATGCACAGCAGATGGGACACCCATCGCCAAGCCCCGCGT
CTGTATCAAGTAGCGTACAACATAACGCTTCGAATGGTTTCGCGACGCCT
ACGCCTGTTAAAACCCAGGGCAAGCCGCAGAATCAGCATCGTCTCAGTAT
TTCCCGCCAGTCACAGCCTCCAGCAACGCCCAATGATCCTACTGGCCAAA
TGCCGAGTCAATCACCTGCGCAGCCGGGCAAAGGCCCAGGTCAAGTCCCC
GGCAAGCCCTCGGAGCAGCTGGATCAGTCAGATCAGCCTTTGAAGCACCA
GATTGAGGATCCCTATAAACCCATGGTCTTGCCAGAAAGCAATTTCCATG
GACCCATAGCCATCGATGAAATGTATCAGATTGGGGAGGATATTACTCGC
TTGAAGCCTAATGTTCCCAGTTTTGCTGAGCTGGGTGTAATTGATATCCA
CGCTCTCACAATGAGCATCAAATCCGGGATACATGCTGAAATGCGCATGG
CCTTGGATACGCTTACATCCATATCCTCAGAGCCGGCGATCCAAATATCG
TTAGATAACTGCGACGATCTGGTGGAGAGCTTGATCGAATGCGCCGAGGA
CCAAGCAGAGTTTCTTGCGGAACATGCCGCAGAAGTGTCTGATATGATGC
TTCTATCCTCATATGAAGAAGTCACTCGTGGATGTCAATCGGAATGGACG
TCTTTGGCGGATGTTCCAGAATTCGGCAGCCTCGACTACGAACTAGACCG
TGCCGTCGACCGACTCATCTGCATTACAACCATACTACGCAATTTCTCGT
TTATCGAGTCAAACTTTGGAATGCTGTCTACGCCCCCGGTTGTTCAATTC
ATGTCGACTATCATTCGTTACCTCGGCACACGCAATATGCTTCTAAGGAC
ACATCAGAACACATTGGATTTCATGAAGGACACAGTAACATACCTCAGCA
ACGTGGCTCACACCATTCAGTTACCGAGTAAAGAAGAAGCCCTCTGTCTT
CTGCATTTCCTTCTTGCTTTTGCACCATTCCCAGGACCTATGGGCTCGGA
GGGTATTATGTTCAATTCATACAACCCCTCAGTTCACAAGTACACACCGG
CAGCGGTTGATAGCTTGGCCAAGCTTCTGGCACGGGACGAGCCCAACCGG
ACATTCTTCAGAGCAATCTTCTCTGGCGATGGCGTTTCCATCCAGCAAGA
GTTGCTGACTCGTGCCTTTGGTCTTGCCATTTGCCCGGTCCCTGATCAGC
CGCGGAAACCCTTGGCTATAGCGGATGCTCGGAAGGTTTTCCTCATGCAA
GGCCTTTTGGCAGCGGATATCCTTTCAGGTTTTGCGGATGGGCCTATTGC
CAAGTCATGGCTGGAGTCGATCGACGGGTTTGCCATCCATCTCCTGCGAC
TCTCATGCCTCCTGAGCACGGAACGCGTTCCTCCACCGAACACCAACTCA
CGCCAATCCCATGCCGCAAGAGGCCAAGCGGAAGCGGAAGCTGCTGCTTA
CAGCTCCATAATCAATCGGGGTTTGGCGATTCTGCGTCGATTGGCCGAGA
AGTCGAAGCTTGCTGATTCCAACGCCACGTTACGGTTCCCCTCGGGGATC
ATCCCAAGGAAAGAAAGCTTGCTTGGCGCACTGCTGATGCCTAGCATAGA
CCCTGGTGTTGTACGGCAATTGATAACTTATGCACGACTAGCGGAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004960ATCC10864_004960Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004960-T1.exon1ATCC10864_004960-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004960-T1.cdsATCC10864_004960-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004960-T1ATCC10864_004960-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF01388
InterProIPR036431
InterProIPR001606
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000130supercontigMCQH01000130:294653..297601 +
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