You are here

Home

ATCC10864_004961-T1, ATCC10864_004961-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004961-T1
Unique NameATCC10864_004961-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000130:298872..299653-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004961-T1 ID=ATCC10864_004961-T1|Name=ATCC10864_004961-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=782bp|location=Sequence derived from alignment at MCQH01000130:298872..299653- (Aspergillus niger ATCC 10864)
ATGGCATCCTTCATGCAGTCTCTGCCGGTCTGCTCGGCCACTCGCAAGCA
GTCAACCGCTGTTCCCTTTTATTTGCAAAAAGCTTCACAGTCCAGAGTCT
CGTCAGGGACGCGTAGCTCCTTCTCTTCGCTATGTTCTTCCGCTAGATTG
ACCCCCTCTCGTAAGTCGCGACCCTTTCCGTCCGTTCCACCCACAGCCTA
TCCCATCGGGATAGTAAGCATGGCTGTTTCTGAGCAGCAAATACCTGGAG
GGTAACAAAAAGAATCCGTCGAGCTTTTCCTGACTTGCTCTTAGAACTCG
CTTCTCGTCACTCCTCCCAAATCACCTCTCAGCCCCAAGTTGCCGCCCAG
CAATGTCGGACTTTCCTCGTTCAACTCAAGCGGCAATCTCAGACTCTTAA
GGAAACCCCGGTATCGCAACCGCCGCCCAACCTGCAACTCACAAACCTCC
CTTATTTCATCCGTCGCACAGCCTCCAACCAACTCCCCGTATATCTTGTT
ACCAAGGCCGGCGGTACCAAGCAACAAACCAAGCTCCAGAAGACTGAAGG
CGATTTGGATGCCCTGAGGAACGATCTGGCGCAGTACCTGGGACTGGAGT
CGGGTGACCCCCGCGCTCCCAAGAGCCCGGATGTCACTATTAACCGTCTT
AACGGTCACATCATTGTCAAGGTACGTCCTCTACGATCTGCCAGTTGATC
ACGGCCGAGCTAACCGGATTGCTTTACTTAGGGCTGGCGCAAACCTGAGA
TCCTGAAGTTCCTTCAGGAACGCAACTTCTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000130:298872..299653-

>ATCC10864_004961-T1 ID=ATCC10864_004961-T1|Name=ATCC10864_004961-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1935bp|location=Sequence derived from alignment at MCQH01000130:298872..299653- (Aspergillus niger ATCC 10864)
GGCTGGCGCAAACCTGAGATCCTGAAGTTCCTTCAGGAACGCAACTTCTA
ACAAATACCTGGAGGGTAACAAAAAGAATCCGTCGAGCTTTTCCTGACTT
GCTCTTAGAACTCGCTTCTCGTCACTCCTCCCAAATCACCTCTCAGCCCC
AAGTTGCCGCCCAGCAATGTCGGACTTTCCTCGTTCAACTCAAGCGGCAA
TCTCAGACTCTTAAGGAAACCCCGGTATCGCAACCGCCGCCCAACCTGCA
ACTCACAAACCTCCCTTATTTCATCCGTCGCACAGCCTCCAACCAACTCC
CCGTATATCTTGTTACCAAGGCCGGCGGTACCAAGCAACAAACCAAGCTC
CAGAAGACTGAAGGCGATTTGGATGCCCTGAGGAACGATCTGGCGCAGTA
CCTGGGACTGGAGTCGGGTGACCCCCGCGCTCCCAAGAGCCCGGATGTCA
CTATTAACCGTCTTAACGGTCACATCATTGTCAAGATGGCATCCTTCATG
CAGTCTCTGCCGGTCTGCTCGGCCACTCGCAAGCAGTCAACCGCTGTTCC
CTTTTATTTGCAAAAAGCTTCACAGTCCAGAGTCTCGTCAGGGACGCGTA
GCTCCTTCTCTTCGCTATGTTCTTCCGCTAGATTGACCCCCTCTCGGCTG
GCGCAAACCTGAGATCCTGAAGTTCCTTCAGGAACGCAACTTCTAACAAA
TACCTGGAGGGTAACAAAAAGAATCCGTCGAGCTTTTCCTGACTTGCTCT
TAGAACTCGCTTCTCGTCACTCCTCCCAAATCACCTCTCAGCCCCAAGTT
GCCGCCCAGCAATGTCGGACTTTCCTCGTTCAACTCAAGCGGCAATCTCA
GACTCTTAAGGAAACCCCGGTATCGCAACCGCCGCCCAACCTGCAACTCA
CAAACCTCCCTTATTTCATCCGTCGCACAGCCTCCAACCAACTCCCCGTA
TATCTTGTTACCAAGGCCGGCGGTACCAAGCAACAAACCAAGCTCCAGAA
GACTGAAGGCGATTTGGATGCCCTGAGGAACGATCTGGCGCAGTACCTGG
GACTGGAGTCGGGTGACCCCCGCGCTCCCAAGAGCCCGGATGTCACTATT
AACCGTCTTAACGGTCACATCATTGTCAAGATGGCATCCTTCATGCAGTC
TCTGCCGGTCTGCTCGGCCACTCGCAAGCAGTCAACCGCTGTTCCCTTTT
ATTTGCAAAAAGCTTCACAGTCCAGAGTCTCGTCAGGGACGCGTAGCTCC
TTCTCTTCGCTATGTTCTTCCGCTAGATTGACCCCCTCTCGGCTGGCGCA
AACCTGAGATCCTGAAGTTCCTTCAGGAACGCAACTTCTAACAAATACCT
GGAGGGTAACAAAAAGAATCCGTCGAGCTTTTCCTGACTTGCTCTTAGAA
CTCGCTTCTCGTCACTCCTCCCAAATCACCTCTCAGCCCCAAGTTGCCGC
CCAGCAATGTCGGACTTTCCTCGTTCAACTCAAGCGGCAATCTCAGACTC
TTAAGGAAACCCCGGTATCGCAACCGCCGCCCAACCTGCAACTCACAAAC
CTCCCTTATTTCATCCGTCGCACAGCCTCCAACCAACTCCCCGTATATCT
TGTTACCAAGGCCGGCGGTACCAAGCAACAAACCAAGCTCCAGAAGACTG
AAGGCGATTTGGATGCCCTGAGGAACGATCTGGCGCAGTACCTGGGACTG
GAGTCGGGTGACCCCCGCGCTCCCAAGAGCCCGGATGTCACTATTAACCG
TCTTAACGGTCACATCATTGTCAAGATGGCATCCTTCATGCAGTCTCTGC
CGGTCTGCTCGGCCACTCGCAAGCAGTCAACCGCTGTTCCCTTTTATTTG
CAAAAAGCTTCACAGTCCAGAGTCTCGTCAGGGACGCGTAGCTCCTTCTC
TTCGCTATGTTCTTCCGCTAGATTGACCCCCTCTC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004961ATCC10864_004961Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004961-T1ATCC10864_004961-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004961-T1.cdsATCC10864_004961-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004961-T1.exon3ATCC10864_004961-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_004961-T1.exon2ATCC10864_004961-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004961-T1.exon1ATCC10864_004961-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR007740
PFAMPF05046
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000130supercontigMCQH01000130:298872..299653 -
Powered by Drupal