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ATCC10864_004972-T1, ATCC10864_004972-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004972-T1
Unique NameATCC10864_004972-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000131:4393..5310-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004972-T1 ID=ATCC10864_004972-T1|Name=ATCC10864_004972-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=918bp|location=Sequence derived from alignment at MCQH01000131:4393..5310- (Aspergillus niger ATCC 10864)
ATGAATATCTTCAGGTTATTAGGTGAGTTGTTTGTTCGCTCTCAGTTCAA
TTGACGCACCATGCTAATTCTTACAAACAAGCCGACTTTTCCCATCTTGC
GTCTATATTCATATTATTGCAGAAGATGAAGTCTTCAAGTGTATGCTGTC
ATTATAACGGATTCTTAGCATTTTTCTGACTGGATCCAGAGTTGCTCAGG
GCTTTCATTCAAGTCCCAGGCGCTATATTTGATGGTTTTTGTAACGCGTT
ATCTTGGTAAGCTTCAGGGATTCAATACTCGATTGTATAGGTCTAGCTCT
CTGACTGGTTTCTGATCACAGATTTATTCTGGGCTTTCACGGACTCTTTC
TATAATACGACTTTTAAAATCCTGTTCATCGGCTCGTCAGCTTATATCAT
CTACCTCATGCTCAACGACTATAAGCCAACGCATGACCCCAACACTGATA
CCTTTAAAGTGCAGTATCTCCTCGGGTTCAGTGCTTTGTTGGCTCTCCTT
TTCCCGCACGACTATAGCGTCTCAGAGGTAAACCCCCTGGCAGGACATTT
GTCACACCTCATCTGACCTTTCTAGATTCTTTGGACGTTCTCTATATGGC
TCGAGTCCGTGGCTATTTTGCCCCAGCTTTTCATGCTTCAGCGCACTGGG
GAGGCGGACACCATAACAACGCATTATCTTTTCGCTTTGGGATTGTATCG
TGCCCTTTACATCCCCAATTGGATTTATCGCTATTTCGCAGAGAGCCACT
TTCAGCCTATCCCTGTTGTAGCCGGTATCATCCAGACACTCTTATATTCT
GATTTCTTTTATATCTATTACACCAAGTGAGTCCCAGCAAGTTTCCTCTA
TCAGTACCCAGGGGCGCTAACTGTCATACAGGGTTATGAAGGGTAAGAAG
TTCTCATTGCCTGTTTAA
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Coding sequence (CDS) from alignment at MCQH01000131:4393..5310-

>ATCC10864_004972-T1 ID=ATCC10864_004972-T1|Name=ATCC10864_004972-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3852bp|location=Sequence derived from alignment at MCQH01000131:4393..5310- (Aspergillus niger ATCC 10864)
GGTTATGAAGGGTAAGAAGTTCTCATTGCCTGTTTAAATTCTTTGGACGT
TCTCTATATGGCTCGAGTCCGTGGCTATTTTGCCCCAGCTTTTCATGCTT
CAGCGCACTGGGGAGGCGGACACCATAACAACGCATTATCTTTTCGCTTT
GGGATTGTATCGTGCCCTTTACATCCCCAATTGGATTTATCGCTATTTCG
CAGAGAGCCACTTTCAGCCTATCCCTGTTGTAGCCGGTATCATCCAGACA
CTCTTATATTCTGATTTCTTTTATATCTATTACACCAAATTTATTCTGGG
CTTTCACGGACTCTTTCTATAATACGACTTTTAAAATCCTGTTCATCGGC
TCGTCAGCTTATATCATCTACCTCATGCTCAACGACTATAAGCCAACGCA
TGACCCCAACACTGATACCTTTAAAGTGCAGTATCTCCTCGGGTTCAGTG
CTTTGTTGGCTCTCCTTTTCCCGCACGACTATAGCGTCTCAGAGAGTTGC
TCAGGGCTTTCATTCAAGTCCCAGGCGCTATATTTGATGGTTTTTGTAAC
GCGTTATCTTGCCGACTTTTCCCATCTTGCGTCTATATTCATATTATTGC
AGAAGATGAAGTCTTCAAGTATGAATATCTTCAGGTTATTAGGGTTATGA
AGGGTAAGAAGTTCTCATTGCCTGTTTAAATTCTTTGGACGTTCTCTATA
TGGCTCGAGTCCGTGGCTATTTTGCCCCAGCTTTTCATGCTTCAGCGCAC
TGGGGAGGCGGACACCATAACAACGCATTATCTTTTCGCTTTGGGATTGT
ATCGTGCCCTTTACATCCCCAATTGGATTTATCGCTATTTCGCAGAGAGC
CACTTTCAGCCTATCCCTGTTGTAGCCGGTATCATCCAGACACTCTTATA
TTCTGATTTCTTTTATATCTATTACACCAAATTTATTCTGGGCTTTCACG
GACTCTTTCTATAATACGACTTTTAAAATCCTGTTCATCGGCTCGTCAGC
TTATATCATCTACCTCATGCTCAACGACTATAAGCCAACGCATGACCCCA
ACACTGATACCTTTAAAGTGCAGTATCTCCTCGGGTTCAGTGCTTTGTTG
GCTCTCCTTTTCCCGCACGACTATAGCGTCTCAGAGAGTTGCTCAGGGCT
TTCATTCAAGTCCCAGGCGCTATATTTGATGGTTTTTGTAACGCGTTATC
TTGCCGACTTTTCCCATCTTGCGTCTATATTCATATTATTGCAGAAGATG
AAGTCTTCAAGTATGAATATCTTCAGGTTATTAGGGTTATGAAGGGTAAG
AAGTTCTCATTGCCTGTTTAAATTCTTTGGACGTTCTCTATATGGCTCGA
GTCCGTGGCTATTTTGCCCCAGCTTTTCATGCTTCAGCGCACTGGGGAGG
CGGACACCATAACAACGCATTATCTTTTCGCTTTGGGATTGTATCGTGCC
CTTTACATCCCCAATTGGATTTATCGCTATTTCGCAGAGAGCCACTTTCA
GCCTATCCCTGTTGTAGCCGGTATCATCCAGACACTCTTATATTCTGATT
TCTTTTATATCTATTACACCAAATTTATTCTGGGCTTTCACGGACTCTTT
CTATAATACGACTTTTAAAATCCTGTTCATCGGCTCGTCAGCTTATATCA
TCTACCTCATGCTCAACGACTATAAGCCAACGCATGACCCCAACACTGAT
ACCTTTAAAGTGCAGTATCTCCTCGGGTTCAGTGCTTTGTTGGCTCTCCT
TTTCCCGCACGACTATAGCGTCTCAGAGAGTTGCTCAGGGCTTTCATTCA
AGTCCCAGGCGCTATATTTGATGGTTTTTGTAACGCGTTATCTTGCCGAC
TTTTCCCATCTTGCGTCTATATTCATATTATTGCAGAAGATGAAGTCTTC
AAGTATGAATATCTTCAGGTTATTAGGGTTATGAAGGGTAAGAAGTTCTC
ATTGCCTGTTTAAATTCTTTGGACGTTCTCTATATGGCTCGAGTCCGTGG
CTATTTTGCCCCAGCTTTTCATGCTTCAGCGCACTGGGGAGGCGGACACC
ATAACAACGCATTATCTTTTCGCTTTGGGATTGTATCGTGCCCTTTACAT
CCCCAATTGGATTTATCGCTATTTCGCAGAGAGCCACTTTCAGCCTATCC
CTGTTGTAGCCGGTATCATCCAGACACTCTTATATTCTGATTTCTTTTAT
ATCTATTACACCAAATTTATTCTGGGCTTTCACGGACTCTTTCTATAATA
CGACTTTTAAAATCCTGTTCATCGGCTCGTCAGCTTATATCATCTACCTC
ATGCTCAACGACTATAAGCCAACGCATGACCCCAACACTGATACCTTTAA
AGTGCAGTATCTCCTCGGGTTCAGTGCTTTGTTGGCTCTCCTTTTCCCGC
ACGACTATAGCGTCTCAGAGAGTTGCTCAGGGCTTTCATTCAAGTCCCAG
GCGCTATATTTGATGGTTTTTGTAACGCGTTATCTTGCCGACTTTTCCCA
TCTTGCGTCTATATTCATATTATTGCAGAAGATGAAGTCTTCAAGTATGA
ATATCTTCAGGTTATTAGGGTTATGAAGGGTAAGAAGTTCTCATTGCCTG
TTTAAATTCTTTGGACGTTCTCTATATGGCTCGAGTCCGTGGCTATTTTG
CCCCAGCTTTTCATGCTTCAGCGCACTGGGGAGGCGGACACCATAACAAC
GCATTATCTTTTCGCTTTGGGATTGTATCGTGCCCTTTACATCCCCAATT
GGATTTATCGCTATTTCGCAGAGAGCCACTTTCAGCCTATCCCTGTTGTA
GCCGGTATCATCCAGACACTCTTATATTCTGATTTCTTTTATATCTATTA
CACCAAATTTATTCTGGGCTTTCACGGACTCTTTCTATAATACGACTTTT
AAAATCCTGTTCATCGGCTCGTCAGCTTATATCATCTACCTCATGCTCAA
CGACTATAAGCCAACGCATGACCCCAACACTGATACCTTTAAAGTGCAGT
ATCTCCTCGGGTTCAGTGCTTTGTTGGCTCTCCTTTTCCCGCACGACTAT
AGCGTCTCAGAGAGTTGCTCAGGGCTTTCATTCAAGTCCCAGGCGCTATA
TTTGATGGTTTTTGTAACGCGTTATCTTGCCGACTTTTCCCATCTTGCGT
CTATATTCATATTATTGCAGAAGATGAAGTCTTCAAGTATGAATATCTTC
AGGTTATTAGGGTTATGAAGGGTAAGAAGTTCTCATTGCCTGTTTAAATT
CTTTGGACGTTCTCTATATGGCTCGAGTCCGTGGCTATTTTGCCCCAGCT
TTTCATGCTTCAGCGCACTGGGGAGGCGGACACCATAACAACGCATTATC
TTTTCGCTTTGGGATTGTATCGTGCCCTTTACATCCCCAATTGGATTTAT
CGCTATTTCGCAGAGAGCCACTTTCAGCCTATCCCTGTTGTAGCCGGTAT
CATCCAGACACTCTTATATTCTGATTTCTTTTATATCTATTACACCAAAT
TTATTCTGGGCTTTCACGGACTCTTTCTATAATACGACTTTTAAAATCCT
GTTCATCGGCTCGTCAGCTTATATCATCTACCTCATGCTCAACGACTATA
AGCCAACGCATGACCCCAACACTGATACCTTTAAAGTGCAGTATCTCCTC
GGGTTCAGTGCTTTGTTGGCTCTCCTTTTCCCGCACGACTATAGCGTCTC
AGAGAGTTGCTCAGGGCTTTCATTCAAGTCCCAGGCGCTATATTTGATGG
TTTTTGTAACGCGTTATCTTGCCGACTTTTCCCATCTTGCGTCTATATTC
ATATTATTGCAGAAGATGAAGTCTTCAAGTATGAATATCTTCAGGTTATT
AG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046923ER retention sequence binding
Vocabulary: Biological Process
TermDefinition
GO:0006621protein retention in ER lumen
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KDELR2ATCC10864_004972Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004972-T1ATCC10864_004972-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004972-T1.cdsATCC10864_004972-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004972-T1.exon6ATCC10864_004972-T1.exon6Aspergillus niger ATCC 10864exon
ATCC10864_004972-T1.exon5ATCC10864_004972-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_004972-T1.exon4ATCC10864_004972-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_004972-T1.exon3ATCC10864_004972-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_004972-T1.exon2ATCC10864_004972-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004972-T1.exon1ATCC10864_004972-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00810
InterProIPR000133
Properties
Property NameValue
ProductER lumen protein-retaining receptor 2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000131supercontigMCQH01000131:4393..5310 -
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